RNA–Protein interactions for RNA: ENST00000639038.1

NECAP1-214, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,423 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-214ENST00000639038 ZNF833PQ6ZTB9 187 aa6.33□□□□□ -1.4
NECAP1-214ENST00000639038 VMO1Q7Z5L0 202 aa6.33□□□□□ -1.4
NECAP1-214ENST00000639038 PHLDA1Q8WV24 401 aaPredicted RBP6.33□□□□□ -1.4
NECAP1-214ENST00000639038 CR1P17927 2039 aa6.32□□□□□ -1.4
NECAP1-214ENST00000639038 HECTD1Q9ULT8 2610 aa6.32□□□□□ -1.4
NECAP1-214ENST00000639038 TRAV8-3A0A0A6YYJ7 113 aa6.32□□□□□ -1.4
NECAP1-214ENST00000639038 ODF3BA8MYP8 253 aa6.32□□□□□ -1.4
NECAP1-214ENST00000639038 SAA2P0DJI9 122 aaPredicted RBP6.32□□□□□ -1.4
NECAP1-214ENST00000639038 IL3RAP26951 378 aa6.32□□□□□ -1.4
NECAP1-214ENST00000639038 RPL39P5Q59GN2 51 aa6.32□□□□□ -1.4
NECAP1-214ENST00000639038 LINC01545Q5VT33 79 aa6.32□□□□□ -1.4
NECAP1-214ENST00000639038 RUSC1-AS1Q66K80 236 aa6.32□□□□□ -1.4
NECAP1-214ENST00000639038 C1orf229Q6ZS94 237 aaPredicted RBP6.32□□□□□ -1.4
NECAP1-214ENST00000639038 OR8A1Q8NGG7 326 aa6.32□□□□□ -1.4
NECAP1-214ENST00000639038 PLA2G2DQ9UNK4 145 aa6.32□□□□□ -1.4
NECAP1-214ENST00000639038 A8MUN3 132 aa6.31□□□□□ -1.4
NECAP1-214ENST00000639038 ZNF73O43830 326 aaPredicted RBP6.31□□□□□ -1.4
NECAP1-214ENST00000639038 IGHV4-31P0DP07 118 aa6.31□□□□□ -1.4
NECAP1-214ENST00000639038 COX8AP10176 69 aa6.31□□□□□ -1.4
NECAP1-214ENST00000639038 COX7A1P24310 79 aa6.31□□□□□ -1.4
NECAP1-214ENST00000639038 RPL30P62888 115 aaKnown RBP6.31□□□□□ -1.4
NECAP1-214ENST00000639038 MYOZ3Q8TDC0 251 aa6.31□□□□□ -1.4
NECAP1-214ENST00000639038 ZNRD1Q9P1U0 126 aa6.31□□□□□ -1.4
NECAP1-214ENST00000639038 ITPR2Q14571 2701 aa6.31□□□□□ -1.4
NECAP1-214ENST00000639038 TRAV8-1A0A0A6YYK1 113 aa6.31□□□□□ -1.4
NECAP1-214ENST00000639038 LOC100131303A0A0U1RQF7 123 aa6.31□□□□□ -1.4
NECAP1-214ENST00000639038 H0Y9J4 135 aa6.31□□□□□ -1.4
NECAP1-214ENST00000639038 BUB1B-PAK6H3BSN5 160 aa6.31□□□□□ -1.4
NECAP1-214ENST00000639038 M0R381 172 aa6.31□□□□□ -1.4
NECAP1-214ENST00000639038 EGR2P11161 476 aaPredicted RBP6.31□□□□□ -1.4
NECAP1-214ENST00000639038 ZNF816Q0VGE8 651 aaPredicted RBP6.31□□□□□ -1.4
NECAP1-214ENST00000639038 RPL7L1Q6DKI1 246 aaKnown RBP6.31□□□□□ -1.4
NECAP1-214ENST00000639038 PGLYRP4Q96LB8 373 aa6.31□□□□□ -1.4
NECAP1-214ENST00000639038 ASH1LQ9NR48 2969 aaKnown RBP6.31□□□□□ -1.4
NECAP1-214ENST00000639038 TP73-AS1Q9UF72 201 aa6.31□□□□□ -1.4
NECAP1-214ENST00000639038 WNK2Q9Y3S1 2297 aa6.31□□□□□ -1.4
NECAP1-214ENST00000639038 PIGBOS1A0A0B4J2F0 54 aa6.3□□□□□ -1.4
NECAP1-214ENST00000639038 ZFP92A6NM28 416 aa6.3□□□□□ -1.4
NECAP1-214ENST00000639038 LINC00473A8K010 186 aa6.3□□□□□ -1.4
NECAP1-214ENST00000639038 BRWD1-AS2P59051 145 aa6.3□□□□□ -1.4
NECAP1-214ENST00000639038 LINC00337Q8N6G1 96 aa6.3□□□□□ -1.4
NECAP1-214ENST00000639038 C18orf12Q96KH6 178 aa6.3□□□□□ -1.4
NECAP1-214ENST00000639038 PLEKHA3Q9HB20 300 aa6.3□□□□□ -1.4
NECAP1-214ENST00000639038 HILPDAQ9Y5L2 63 aa6.3□□□□□ -1.4
NECAP1-214ENST00000639038 CSMD2Q7Z408 3487 aa6.3□□□□□ -1.4
NECAP1-214ENST00000639038 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.3□□□□□ -1.49e-7■■■■■ 30.3
NECAP1-214ENST00000639038 LST1O00453 97 aa6.3□□□□□ -1.4
NECAP1-214ENST00000639038 LGALS3P17931 250 aaKnown RBP6.3□□□□□ -1.4
NECAP1-214ENST00000639038 PRB3Q04118 309 aaPredicted RBP6.3□□□□□ -1.4
NECAP1-214ENST00000639038 MINOS1Q5TGZ0 78 aa6.3□□□□□ -1.4
NECAP1-214ENST00000639038 SBSPONQ8IVN8 264 aa6.3□□□□□ -1.4
NECAP1-214ENST00000639038 DPM3Q9P2X0 92 aa6.3□□□□□ -1.4
NECAP1-214ENST00000639038 LINC00527Q9UJ94 153 aa6.3□□□□□ -1.4
NECAP1-214ENST00000639038 MINOS1-NBL1R4GNA1 71 aa6.3□□□□□ -1.4
NECAP1-214ENST00000639038 UBE2L6O14933 153 aa6.29□□□□□ -1.4
NECAP1-214ENST00000639038 HLA-DQA1P01909 254 aa6.29□□□□□ -1.4
NECAP1-214ENST00000639038 SMCPP49901 116 aaPredicted RBP6.29□□□□□ -1.4
NECAP1-214ENST00000639038 LINC00205P59089 165 aa6.29□□□□□ -1.4
NECAP1-214ENST00000639038 MAPK1IP1LQ8NDC0 245 aa6.29□□□□□ -1.4
NECAP1-214ENST00000639038 NABP2Q9BQ15 211 aa6.29□□□□□ -1.4
NECAP1-214ENST00000639038 C7orf69Q9H7B7 122 aa6.29□□□□□ -1.4
NECAP1-214ENST00000639038 TRAV2A0A0B4J234 112 aa6.29□□□□□ -1.4
NECAP1-214ENST00000639038 SS18Q15532 418 aa6.29□□□□□ -1.4
NECAP1-214ENST00000639038 MIC13Q5XKP0 118 aa6.29□□□□□ -1.4
NECAP1-214ENST00000639038 MAPKAPK5-AS1Q8N8E1 139 aa6.29□□□□□ -1.4
NECAP1-214ENST00000639038 RITA1Q96K30 269 aa6.29□□□□□ -1.4
NECAP1-214ENST00000639038 ODF3Q96PU9 254 aa6.29□□□□□ -1.4
NECAP1-214ENST00000639038 AKAP9Q99996 3911 aa6.29□□□□□ -1.4
NECAP1-214ENST00000639038 VPS13CQ709C8 3753 aa6.29□□□□□ -1.4
NECAP1-214ENST00000639038 TRAV9-1A0A075B6T8 112 aa6.28□□□□□ -1.4
NECAP1-214ENST00000639038 IGHV1-69DA0A0B4J2H0 117 aa6.28□□□□□ -1.4
NECAP1-214ENST00000639038 IGKV1-39P01597 117 aa6.28□□□□□ -1.4
NECAP1-214ENST00000639038 IGHV1-69P01742 117 aa6.28□□□□□ -1.4
NECAP1-214ENST00000639038 IGKV1D-39P04432 117 aa6.28□□□□□ -1.4
NECAP1-214ENST00000639038 C11orf72Q8NBR9 251 aa6.28□□□□□ -1.4
NECAP1-214ENST00000639038 TIMM17AQ99595 171 aa6.28□□□□□ -1.4
NECAP1-214ENST00000639038 MOB4Q9Y3A3 225 aa6.28□□□□□ -1.4
NECAP1-214ENST00000639038 TRGV11A0A075B6L2 103 aa6.28□□□□□ -1.4
NECAP1-214ENST00000639038 IGHV1-3A0A0C4DH29 117 aa6.28□□□□□ -1.4
NECAP1-214ENST00000639038 ICAM4Q14773 271 aa6.28□□□□□ -1.4
NECAP1-214ENST00000639038 LYZL2Q7Z4W2 148 aa6.28□□□□□ -1.4
NECAP1-214ENST00000639038 CHAC1Q9BUX1 264 aa6.28□□□□□ -1.4
NECAP1-214ENST00000639038 ARL2-SNX15V9GYD0 113 aa6.28□□□□□ -1.4
NECAP1-214ENST00000639038 TRBV20OR9-2A0A075B6H5 130 aa6.27□□□□□ -1.41
NECAP1-214ENST00000639038 A0A1W2PS18 150 aa6.27□□□□□ -1.41
NECAP1-214ENST00000639038 PGPA6NDG6 321 aa6.27□□□□□ -1.41
NECAP1-214ENST00000639038 ATOX1O00244 68 aa6.27□□□□□ -1.41
NECAP1-214ENST00000639038 ZNF80P51504 273 aaPredicted RBP6.27□□□□□ -1.41
NECAP1-214ENST00000639038 CYCSP99999 105 aaKnown RBP6.27□□□□□ -1.41
NECAP1-214ENST00000639038 PDPNQ86YL7 162 aa6.27□□□□□ -1.41
NECAP1-214ENST00000639038 MAP6D1Q9H9H5 199 aa6.27□□□□□ -1.41
NECAP1-214ENST00000639038 TRBV27A0A0K0K1C4 114 aa6.27□□□□□ -1.41
NECAP1-214ENST00000639038 KLLNB2CW77 178 aa6.27□□□□□ -1.41
NECAP1-214ENST00000639038 IGLL5B9A064 214 aa6.27□□□□□ -1.41
NECAP1-214ENST00000639038 TMEM256-PLSCR3K7ERE1 68 aa6.27□□□□□ -1.41
NECAP1-214ENST00000639038 K7ERJ3 54 aa6.27□□□□□ -1.41
NECAP1-214ENST00000639038 IGKV1-5P01602 117 aa6.27□□□□□ -1.41
NECAP1-214ENST00000639038 P0C879 139 aa6.27□□□□□ -1.41
NECAP1-214ENST00000639038 HBBP68871 147 aa6.27□□□□□ -1.41
NECAP1-214ENST00000639038 C2orf50Q96LR7 162 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms