RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 LINC00526Q96FQ7 95 aa9.24□□□□□ -0.93
GFAP-228ENST00000638488 SLC50A1Q9BRV3 221 aa9.24□□□□□ -0.93
GFAP-228ENST00000638488 A0A1W2PPR1 153 aa9.24□□□□□ -0.93
GFAP-228ENST00000638488 TMEM170BQ5T4T1 132 aa9.24□□□□□ -0.93
GFAP-228ENST00000638488 UBTD1Q9HAC8 227 aa9.24□□□□□ -0.93
GFAP-228ENST00000638488 ASH1LQ9NR48 2969 aaKnown RBP9.24□□□□□ -0.93
GFAP-228ENST00000638488 TRAV26-2A0A0B4J265 109 aa9.23□□□□□ -0.93
GFAP-228ENST00000638488 TRBV30A0A0K0K1B3 111 aa9.23□□□□□ -0.93
GFAP-228ENST00000638488 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.23□□□□□ -0.93
GFAP-228ENST00000638488 A4D1N5 150 aa9.23□□□□□ -0.93
GFAP-228ENST00000638488 HERVK_113P63121 156 aa9.23□□□□□ -0.93
GFAP-228ENST00000638488 C2orf66Q6UXQ4 117 aa9.23□□□□□ -0.93
GFAP-228ENST00000638488 HIVEP3Q5T1R4 2406 aa9.22□□□□□ -0.93
GFAP-228ENST00000638488 LOC107984640A0A0U1RRK4 108 aa9.22□□□□□ -0.93
GFAP-228ENST00000638488 FAM236AA0A1B0GUQ0 79 aa9.22□□□□□ -0.93
GFAP-228ENST00000638488 FAM236BA0A1B0GV22 79 aa9.22□□□□□ -0.93
GFAP-228ENST00000638488 K7EIM0 57 aa9.22□□□□□ -0.93
GFAP-228ENST00000638488 C2orf82Q6UX34 121 aa9.22□□□□□ -0.93
GFAP-228ENST00000638488 TMEM219Q86XT9 240 aa9.22□□□□□ -0.93
GFAP-228ENST00000638488 KLK15Q9H2R5 256 aa9.22□□□□□ -0.93
GFAP-228ENST00000638488 ITPR1Q14643 2758 aa9.22□□□□□ -0.93
GFAP-228ENST00000638488 AKAP6Q13023 2319 aa9.22□□□□□ -0.93
GFAP-228ENST00000638488 SUMO2P61956 95 aaKnown RBP9.22□□□□□ -0.93
GFAP-228ENST00000638488 C11orf71Q6IPW1 123 aa9.22□□□□□ -0.93
GFAP-228ENST00000638488 MED13LQ71F56 2210 aa9.22□□□□□ -0.93
GFAP-228ENST00000638488 IGLV4-69A0A075B6H9 119 aa9.21□□□□□ -0.93
GFAP-228ENST00000638488 C11orf86A6NJI1 115 aa9.21□□□□□ -0.93
GFAP-228ENST00000638488 EIF4EBP3O60516 100 aaPredicted RBP9.21□□□□□ -0.93
GFAP-228ENST00000638488 EMP1P54849 157 aa9.21□□□□□ -0.93
GFAP-228ENST00000638488 CFHR4Q92496 578 aa9.21□□□□□ -0.93
GFAP-228ENST00000638488 OOSP1A8MZH6 123 aa9.21□□□□□ -0.94
GFAP-228ENST00000638488 ACYP1P07311 99 aa9.21□□□□□ -0.94
GFAP-228ENST00000638488 GNLYP22749 145 aa9.21□□□□□ -0.94
GFAP-228ENST00000638488 AMELXQ99217 191 aa9.21□□□□□ -0.94
GFAP-228ENST00000638488 ABCA1O95477 2261 aa9.21□□□□□ -0.94
GFAP-228ENST00000638488 IGKV3D-20A0A0C4DH25 116 aa9.2□□□□□ -0.94
GFAP-228ENST00000638488 IGHV7-4-1A0A0J9YVY3 117 aa9.2□□□□□ -0.94
GFAP-228ENST00000638488 PMVKQ15126 192 aa9.2□□□□□ -0.94
GFAP-228ENST00000638488 TRGV11A0A075B6L2 103 aa9.2□□□□□ -0.94
GFAP-228ENST00000638488 IGHV1-69DA0A0B4J2H0 117 aa9.2□□□□□ -0.94
GFAP-228ENST00000638488 RBAKDNA6NC62 111 aa9.2□□□□□ -0.94
GFAP-228ENST00000638488 LY6G5BQ8NDX9 201 aa9.2□□□□□ -0.94
GFAP-228ENST00000638488 COL12A1Q99715 3063 aa9.2□□□□□ -0.94
GFAP-228ENST00000638488 WNK2Q9Y3S1 2297 aa9.2□□□□□ -0.94
GFAP-228ENST00000638488 IGHV4-39P01824 125 aa9.19□□□□□ -0.94
GFAP-228ENST00000638488 CRYGDP07320 174 aa9.19□□□□□ -0.94
GFAP-228ENST00000638488 ELANEP08246 267 aa9.19□□□□□ -0.94
GFAP-228ENST00000638488 TSPEAR-AS2P59090 65 aa9.19□□□□□ -0.94
GFAP-228ENST00000638488 Q1RN00 199 aa9.19□□□□□ -0.94
GFAP-228ENST00000638488 DPM3Q9P2X0 92 aa9.19□□□□□ -0.94
GFAP-228ENST00000638488 S4R3C0 116 aa9.19□□□□□ -0.94
GFAP-228ENST00000638488 LY6LH3BQJ8 138 aa9.18□□□□□ -0.94
GFAP-228ENST00000638488 H7C423 109 aa9.18□□□□□ -0.94
GFAP-228ENST00000638488 C19orf84I3L1E1 186 aa9.18□□□□□ -0.94
GFAP-228ENST00000638488 PRORYQ9H606 182 aa9.18□□□□□ -0.94
GFAP-228ENST00000638488 J3QQQ9 107 aa9.18□□□□□ -0.94
GFAP-228ENST00000638488 M0R381 172 aa9.18□□□□□ -0.94
GFAP-228ENST00000638488 LGALS3P17931 250 aaKnown RBP9.18□□□□□ -0.94
GFAP-228ENST00000638488 SPANXN1Q5VSR9 72 aa9.18□□□□□ -0.94
GFAP-228ENST00000638488 VMO1Q7Z5L0 202 aa9.18□□□□□ -0.94
GFAP-228ENST00000638488 METTL26Q96S19 204 aa9.18□□□□□ -0.94
GFAP-228ENST00000638488 ZFP36P26651 326 aaKnown RBP9.18□□□□□ -0.94
GFAP-228ENST00000638488 H7C2G1 150 aa9.17□□□□□ -0.94
GFAP-228ENST00000638488 TRIAP1O43715 76 aa9.17□□□□□ -0.94
GFAP-228ENST00000638488 DYNAPQ8N1N2 210 aa9.17□□□□□ -0.94
GFAP-228ENST00000638488 NBR2O15453 112 aa9.17□□□□□ -0.94
GFAP-228ENST00000638488 CRYGAP11844 174 aa9.17□□□□□ -0.94
GFAP-228ENST00000638488 ZNRF2Q8NHG8 242 aa9.17□□□□□ -0.94
GFAP-228ENST00000638488 ITLN2Q8WWU7 325 aaPredicted RBP9.17□□□□□ -0.94
GFAP-228ENST00000638488 C11orf21Q9P2W6 132 aa9.17□□□□□ -0.94
GFAP-228ENST00000638488 PPP1R17O96001 155 aa9.16□□□□□ -0.94
GFAP-228ENST00000638488 SPTAN1Q13813 2472 aaKnown RBP9.16□□□□□ -0.94
GFAP-228ENST00000638488 COX7CP15954 63 aa9.16□□□□□ -0.94
GFAP-228ENST00000638488 C14orf178Q8N769 122 aaPredicted RBP9.16□□□□□ -0.94
GFAP-228ENST00000638488 TMEM141Q96I45 108 aa9.16□□□□□ -0.94
GFAP-228ENST00000638488 A0A0J9YX75 114 aa9.15□□□□□ -0.94
GFAP-228ENST00000638488 M0R1W7 72 aa9.15□□□□□ -0.94
GFAP-228ENST00000638488 COX6CP09669 75 aa9.15□□□□□ -0.94
GFAP-228ENST00000638488 LINC00643Q86TS7 51 aa9.15□□□□□ -0.94
GFAP-228ENST00000638488 MUSTN1Q8IVN3 82 aa9.15□□□□□ -0.94
GFAP-228ENST00000638488 DUX3Q96PT4 197 aa9.15□□□□□ -0.94
GFAP-228ENST00000638488 SMAD5-AS1Q9Y6J3 95 aa9.15□□□□□ -0.94
GFAP-228ENST00000638488 TMEM223A0PJW6 202 aa9.15□□□□□ -0.95
GFAP-228ENST00000638488 RNF223E7ERA6 249 aa9.15□□□□□ -0.95
GFAP-228ENST00000638488 CXCL5P42830 114 aa9.15□□□□□ -0.95
GFAP-228ENST00000638488 GAGE2AQ6NT46 116 aa9.15□□□□□ -0.95
GFAP-228ENST00000638488 CEMP1Q6PRD7 247 aaPredicted RBP9.15□□□□□ -0.95
GFAP-228ENST00000638488 IGIPA6NJ69 53 aa9.14□□□□□ -0.95
GFAP-228ENST00000638488 LEPROTO15243 131 aa9.14□□□□□ -0.95
GFAP-228ENST00000638488 TSHBP01222 138 aa9.14□□□□□ -0.95
GFAP-228ENST00000638488 BPESC1Q9GZL8 116 aa9.14□□□□□ -0.95
GFAP-228ENST00000638488 DPH3P1Q9H4G8 78 aa9.14□□□□□ -0.95
GFAP-228ENST00000638488 LINC00527Q9UJ94 153 aa9.14□□□□□ -0.95
GFAP-228ENST00000638488 PKD1L2Q7Z442 2459 aa9.14□□□□□ -0.95
GFAP-228ENST00000638488 ODF3BA8MYP8 253 aa9.14□□□□□ -0.95
GFAP-228ENST00000638488 MFAP4P55083 255 aa9.14□□□□□ -0.95
GFAP-228ENST00000638488 TIMM17AQ99595 171 aa9.14□□□□□ -0.95
GFAP-228ENST00000638488 RNF5Q99942 180 aa9.14□□□□□ -0.95
GFAP-228ENST00000638488 EDA2RQ9HAV5 297 aa9.14□□□□□ -0.95
GFAP-228ENST00000638488 ICOSQ9Y6W8 199 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms