RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 A0A0J9YY99 117 aa13.58□□□□□ -0.24
HLA-A-209ENST00000638375 CIDEAO60543 219 aa13.58□□□□□ -0.24
HLA-A-209ENST00000638375 MT-ND4LP03901 98 aa13.58□□□□□ -0.24
HLA-A-209ENST00000638375 GATA1P15976 413 aaPredicted RBP13.58□□□□□ -0.24
HLA-A-209ENST00000638375 FAM74A4Q5TZK3 123 aa13.58□□□□□ -0.24
HLA-A-209ENST00000638375 ZFP2Q6ZN57 461 aa13.58□□□□□ -0.24
HLA-A-209ENST00000638375 PRO0255Q9UI72 69 aa13.58□□□□□ -0.24
HLA-A-209ENST00000638375 APLNQ9ULZ1 77 aa13.58□□□□□ -0.24
HLA-A-209ENST00000638375 HHLA3Q9XRX5 114 aa13.58□□□□□ -0.24
HLA-A-209ENST00000638375 CRYBA4P53673 196 aa13.57□□□□□ -0.24
HLA-A-209ENST00000638375 Q6ZSN1 163 aa13.57□□□□□ -0.24
HLA-A-209ENST00000638375 C14orf178Q8N769 122 aaPredicted RBP13.57□□□□□ -0.24
HLA-A-209ENST00000638375 AP1S3Q96PC3 154 aa13.57□□□□□ -0.24
HLA-A-209ENST00000638375 NAT8BQ9UHF3 227 aa13.57□□□□□ -0.24
HLA-A-209ENST00000638375 KIF25-AS1Q9Y6Z4 181 aa13.57□□□□□ -0.24
HLA-A-209ENST00000638375 RHODO00212 210 aa13.56□□□□□ -0.24
HLA-A-209ENST00000638375 SLAQ13239 276 aa13.56□□□□□ -0.24
HLA-A-209ENST00000638375 TWIST1Q15672 202 aa13.56□□□□□ -0.24
HLA-A-209ENST00000638375 NDUFA5Q16718 116 aa13.56□□□□□ -0.24
HLA-A-209ENST00000638375 A0A1B0GUT8 65 aa13.55□□□□□ -0.24
HLA-A-209ENST00000638375 PAX4O43316 350 aa13.55□□□□□ -0.24
HLA-A-209ENST00000638375 APOC3P02656 99 aa13.55□□□□□ -0.24
HLA-A-209ENST00000638375 CLRN3Q8NCR9 226 aa13.55□□□□□ -0.24
HLA-A-209ENST00000638375 TRGC1P0CF51 173 aa13.54□□□□□ -0.24
HLA-A-209ENST00000638375 EVI2AP22794 236 aa13.54□□□□□ -0.24
HLA-A-209ENST00000638375 TCTAP57738 103 aa13.54□□□□□ -0.24
HLA-A-209ENST00000638375 LINC00315P59091 139 aa13.54□□□□□ -0.24
HLA-A-209ENST00000638375 SLC25A29Q8N8R3 303 aa13.54□□□□□ -0.24
HLA-A-209ENST00000638375 C7orf77A4D0Y5 90 aa13.53□□□□□ -0.24
HLA-A-209ENST00000638375 H3BNG1 76 aa13.53□□□□□ -0.24
HLA-A-209ENST00000638375 C15orf53Q8NAA6 179 aa13.53□□□□□ -0.24
HLA-A-209ENST00000638375 BORCS7Q96B45 105 aa13.53□□□□□ -0.24
HLA-A-209ENST00000638375 LOC100131303A0A0U1RQF7 123 aa13.52□□□□□ -0.25
HLA-A-209ENST00000638375 TRBV6-4A0A1B0GX49 114 aa13.52□□□□□ -0.25
HLA-A-209ENST00000638375 NUDT3O95989 172 aa13.52□□□□□ -0.25
HLA-A-209ENST00000638375 SMIM17P0DL12 118 aa13.52□□□□□ -0.25
HLA-A-209ENST00000638375 CTDSP1Q9GZU7 261 aa13.52□□□□□ -0.25
HLA-A-209ENST00000638375 K7EQD1 137 aa13.51□□□□□ -0.25
HLA-A-209ENST00000638375 GYPEP15421 78 aa13.51□□□□□ -0.25
HLA-A-209ENST00000638375 FAM3BP58499 235 aaPredicted RBP13.51□□□□□ -0.25
HLA-A-209ENST00000638375 ZNF56Q15929 161 aa13.51□□□□□ -0.25
HLA-A-209ENST00000638375 DPH3P1Q9H4G8 78 aa13.51□□□□□ -0.25
HLA-A-209ENST00000638375 A0A096LPF7 62 aa13.5□□□□□ -0.25
HLA-A-209ENST00000638375 MGPP08493 103 aa13.5□□□□□ -0.25
HLA-A-209ENST00000638375 RIGQ13278 110 aa13.5□□□□□ -0.25
HLA-A-209ENST00000638375 RHEBQ15382 184 aa13.5□□□□□ -0.25
HLA-A-209ENST00000638375 RHOHQ15669 191 aa13.5□□□□□ -0.25
HLA-A-209ENST00000638375 SVBPQ8N300 66 aa13.5□□□□□ -0.25
HLA-A-209ENST00000638375 Q9UF83 564 aa13.5□□□□□ -0.25
HLA-A-209ENST00000638375 RAB4BP61018 213 aa13.49□□□□□ -0.25
HLA-A-209ENST00000638375 RPS10P5Q9NQ39 176 aa13.49□□□□□ -0.25
HLA-A-209ENST00000638375 A0A087WWC5 75 aa13.48□□□□□ -0.25
HLA-A-209ENST00000638375 F5H697 171 aa13.48□□□□□ -0.25
HLA-A-209ENST00000638375 SNAPINO95295 136 aa13.48□□□□□ -0.25
HLA-A-209ENST00000638375 P0DMU3 169 aa13.48□□□□□ -0.25
HLA-A-209ENST00000638375 FAM231AP0DMU4 169 aa13.48□□□□□ -0.25
HLA-A-209ENST00000638375 FAM231CP0DMU5 169 aa13.48□□□□□ -0.25
HLA-A-209ENST00000638375 MRPL54Q6P161 138 aaKnown RBP13.48□□□□□ -0.25
HLA-A-209ENST00000638375 IMMP2LQ96T52 175 aa13.48□□□□□ -0.25
HLA-A-209ENST00000638375 PRADC1Q9BSG0 188 aa13.48□□□□□ -0.25
HLA-A-209ENST00000638375 ICOSQ9Y6W8 199 aa13.48□□□□□ -0.25
HLA-A-209ENST00000638375 ALMS1Q8TCU4 4167 aa13.47□□□□□ -0.25
HLA-A-209ENST00000638375 A0A1B0GXF2 115 aa13.47□□□□□ -0.25
HLA-A-209ENST00000638375 SMIM15Q7Z3B0 74 aa13.47□□□□□ -0.25
HLA-A-209ENST00000638375 TMEM191AQ9H0A3 160 aa13.47□□□□□ -0.25
HLA-A-209ENST00000638375 TMEM242Q9NWH2 141 aa13.47□□□□□ -0.25
HLA-A-209ENST00000638375 TENM2Q9NT68 2774 aa13.46□□□□□ -0.25
HLA-A-209ENST00000638375 MRPL23Q16540 153 aaKnown RBP13.46□□□□□ -0.25
HLA-A-209ENST00000638375 SUMO4Q6EEV6 95 aa13.46□□□□□ -0.25
HLA-A-209ENST00000638375 LINC00694P0DN24 101 aa13.45□□□□□ -0.26
HLA-A-209ENST00000638375 CAMPP49913 170 aa13.45□□□□□ -0.26
HLA-A-209ENST00000638375 ATRAIDQ6UW56 229 aa13.45□□□□□ -0.26
HLA-A-209ENST00000638375 A0A1B0GW15 77 aa13.44□□□□□ -0.26
HLA-A-209ENST00000638375 GAGE12JA6NER3 117 aa13.44□□□□□ -0.26
HLA-A-209ENST00000638375 M0QY20 66 aa13.44□□□□□ -0.26
HLA-A-209ENST00000638375 SRIP30626 198 aa13.44□□□□□ -0.26
HLA-A-209ENST00000638375 HBBP68871 147 aa13.44□□□□□ -0.26
HLA-A-209ENST00000638375 GAGE1Q13065 139 aa13.44□□□□□ -0.26
HLA-A-209ENST00000638375 GAGE4Q13068 117 aa13.44□□□□□ -0.26
HLA-A-209ENST00000638375 GAGE5Q13069 117 aa13.44□□□□□ -0.26
HLA-A-209ENST00000638375 GAGE13Q4V321 117 aa13.44□□□□□ -0.26
HLA-A-209ENST00000638375 ATP5L2Q7Z4Y8 100 aa13.44□□□□□ -0.26
HLA-A-209ENST00000638375 RNF185Q96GF1 192 aa13.44□□□□□ -0.26
HLA-A-209ENST00000638375 DNAH1Q9P2D7 4330 aa13.43□□□□□ -0.26
HLA-A-209ENST00000638375 TRBV10-1A0A0K0K1A3 114 aa13.43□□□□□ -0.26
HLA-A-209ENST00000638375 KCNIP4Q6PIL6 250 aa13.43□□□□□ -0.26
HLA-A-209ENST00000638375 AMN1Q8IY45 258 aa13.43□□□□□ -0.26
HLA-A-209ENST00000638375 GATD1Q8NB37 220 aa13.43□□□□□ -0.26
HLA-A-209ENST00000638375 NEXN-AS1Q8NBZ9 246 aa13.43□□□□□ -0.26
HLA-A-209ENST00000638375 BTF3L4Q96K17 158 aa13.43□□□□□ -0.26
HLA-A-209ENST00000638375 TRAV26-2A0A0B4J265 109 aa13.42□□□□□ -0.26
HLA-A-209ENST00000638375 ESRGQ1W209 222 aa13.42□□□□□ -0.26
HLA-A-209ENST00000638375 NEGR1Q7Z3B1 354 aa13.42□□□□□ -0.26
HLA-A-209ENST00000638375 LINC00476Q8WZB0 136 aa13.42□□□□□ -0.26
HLA-A-209ENST00000638375 LYSTQ99698 3801 aa13.42□□□□□ -0.26
HLA-A-209ENST00000638375 URGCP-MRPS24S4R325 110 aa13.42□□□□□ -0.26
HLA-A-209ENST00000638375 VPS13DQ5THJ4 4388 aa13.41□□□□□ -0.26
HLA-A-209ENST00000638375 S100A8P05109 93 aa13.41□□□□□ -0.26
HLA-A-209ENST00000638375 RAB4AP20338 218 aa13.41□□□□□ -0.26
HLA-A-209ENST00000638375 LGALS9CQ6DKI2 356 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms