RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 C5orf38Q86SI9 138 aa9.12□□□□□ -0.95
CAPN3-221ENST00000638141 IGHV3-72A0A0B4J1Y9 119 aa9.11□□□□□ -0.95
CAPN3-221ENST00000638141 LST1O00453 97 aa9.11□□□□□ -0.95
CAPN3-221ENST00000638141 HIST1H4AP62805 103 aaKnown RBP9.11□□□□□ -0.95
CAPN3-221ENST00000638141 MUSTN1Q8IVN3 82 aa9.11□□□□□ -0.95
CAPN3-221ENST00000638141 C2orf48Q96LS8 159 aa9.11□□□□□ -0.95
CAPN3-221ENST00000638141 SMAD5-AS1Q9Y6J3 95 aa9.11□□□□□ -0.95
CAPN3-221ENST00000638141 TMEM258P61165 79 aa9.1□□□□□ -0.95
CAPN3-221ENST00000638141 ZNF876PQ49A33 203 aa9.1□□□□□ -0.95
CAPN3-221ENST00000638141 CEMP1Q6PRD7 247 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-221ENST00000638141 C14orf178Q8N769 122 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-221ENST00000638141 AGPAT4-IT1Q9H0P7 198 aa9.1□□□□□ -0.95
CAPN3-221ENST00000638141 DPH3P1Q9H4G8 78 aa9.1□□□□□ -0.95
CAPN3-221ENST00000638141 ICOSQ9Y6W8 199 aa9.1□□□□□ -0.95
CAPN3-221ENST00000638141 IGLV11-55A0A075B6I3 123 aa9.1□□□□□ -0.95
CAPN3-221ENST00000638141 MBD3L4A6NDZ8 208 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-221ENST00000638141 MBD3L3A6NE82 208 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-221ENST00000638141 MBD3L5A6NJ08 208 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-221ENST00000638141 TMEM178BH3BS89 294 aa9.1□□□□□ -0.95
CAPN3-221ENST00000638141 MED14OSP0DP75 135 aa9.1□□□□□ -0.95
CAPN3-221ENST00000638141 MBD3L2Q8NHZ7 208 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-221ENST00000638141 DUX3Q96PT4 197 aa9.1□□□□□ -0.95
CAPN3-221ENST00000638141 LINC00527Q9UJ94 153 aa9.1□□□□□ -0.95
CAPN3-221ENST00000638141 ITPR1Q14643 2758 aa9.1□□□□□ -0.95
CAPN3-221ENST00000638141 OVOL1O14753 267 aa9.09□□□□□ -0.95
CAPN3-221ENST00000638141 ZNF256Q9Y2P7 627 aaPredicted RBP9.09□□□□□ -0.95
CAPN3-221ENST00000638141 ABCA1O95477 2261 aa9.09□□□□□ -0.95
CAPN3-221ENST00000638141 BUB1B-PAK6H3BSN5 160 aa9.09□□□□□ -0.95
CAPN3-221ENST00000638141 ATOX1O00244 68 aa9.09□□□□□ -0.95
CAPN3-221ENST00000638141 EDA2RQ9HAV5 297 aa9.09□□□□□ -0.95
CAPN3-221ENST00000638141 LENEPQ9Y5L5 61 aa9.09□□□□□ -0.95
CAPN3-221ENST00000638141 CACNA1BQ00975 2339 aa9.09□□□□□ -0.95
CAPN3-221ENST00000638141 H7C2G1 150 aa9.08□□□□□ -0.96
CAPN3-221ENST00000638141 ZNF22P17026 224 aaPredicted RBP9.08□□□□□ -0.96
CAPN3-221ENST00000638141 MALRD1Q5VYJ5 2156 aa9.08□□□□□ -0.96
CAPN3-221ENST00000638141 PTPRQQ9UMZ3 2332 aa9.08□□□□□ -0.96
CAPN3-221ENST00000638141 DLX1P56177 255 aa9.08□□□□□ -0.96
CAPN3-221ENST00000638141 KLK5Q9Y337 293 aaPredicted RBP9.08□□□□□ -0.96
CAPN3-221ENST00000638141 F5H768 121 aa9.07□□□□□ -0.96
CAPN3-221ENST00000638141 F8W735 103 aaPredicted RBP9.07□□□□□ -0.96
CAPN3-221ENST00000638141 PIMREGQ9BSJ6 248 aa9.07□□□□□ -0.96
CAPN3-221ENST00000638141 USP24Q9UPU5 2620 aa9.07□□□□□ -0.96
CAPN3-221ENST00000638141 PKD1L2Q7Z442 2459 aa9.07□□□□□ -0.96
CAPN3-221ENST00000638141 ATP1A1-AS1Q5TC04 95 aa9.07□□□□□ -0.96
CAPN3-221ENST00000638141 C9orf47Q6ZRZ4 202 aa9.07□□□□□ -0.96
CAPN3-221ENST00000638141 NPBQ8NG41 125 aa9.07□□□□□ -0.96
CAPN3-221ENST00000638141 PIEZO2Q9H5I5 2752 aa9.06□□□□□ -0.96
CAPN3-221ENST00000638141 IGHV4OR15-8A0A075B7B6 117 aa9.06□□□□□ -0.96
CAPN3-221ENST00000638141 A0A087WW49 117 aa9.06□□□□□ -0.96
CAPN3-221ENST00000638141 KIR2DL5BQ8NHK3 375 aa9.06□□□□□ -0.96
CAPN3-221ENST00000638141 DCANP1Q8TF63 244 aa9.06□□□□□ -0.96
CAPN3-221ENST00000638141 RPL39LQ96EH5 51 aaKnown RBP9.06□□□□□ -0.96
CAPN3-221ENST00000638141 FANCD2OSQ96PS1 177 aa9.06□□□□□ -0.96
CAPN3-221ENST00000638141 PEMTQ9UBM1 199 aa9.06□□□□□ -0.96
CAPN3-221ENST00000638141 MED13Q9UHV7 2174 aa9.06□□□□□ -0.96
CAPN3-221ENST00000638141 PRAC2D3DTV9 90 aa9.06□□□□□ -0.96
CAPN3-221ENST00000638141 NBR2O15453 112 aa9.06□□□□□ -0.96
CAPN3-221ENST00000638141 IGHV1-69P01742 117 aa9.06□□□□□ -0.96
CAPN3-221ENST00000638141 TRACP01848 142 aa9.06□□□□□ -0.96
CAPN3-221ENST00000638141 GPHB5Q86YW7 130 aa9.06□□□□□ -0.96
CAPN3-221ENST00000638141 DPH3Q96FX2 82 aa9.06□□□□□ -0.96
CAPN3-221ENST00000638141 TP53TG1Q9Y2A0 90 aa9.06□□□□□ -0.96
CAPN3-221ENST00000638141 PRRC2CQ9Y520 2896 aaKnown RBP9.05□□□□□ -0.96
CAPN3-221ENST00000638141 LY6LH3BQJ8 138 aa9.05□□□□□ -0.96
CAPN3-221ENST00000638141 CCL8P80075 99 aa9.05□□□□□ -0.96
CAPN3-221ENST00000638141 ZFAND3Q9H8U3 227 aa9.05□□□□□ -0.96
CAPN3-221ENST00000638141 BEX4Q9NWD9 120 aaPredicted RBP9.05□□□□□ -0.96
CAPN3-221ENST00000638141 UBE2E1P51965 193 aa9.05□□□□□ -0.96
CAPN3-221ENST00000638141 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.05□□□□□ -0.96
CAPN3-221ENST00000638141 SMCR5Q8TEV8 140 aa9.05□□□□□ -0.96
CAPN3-221ENST00000638141 BSNQ9UPA5 3926 aa9.05□□□□□ -0.96
CAPN3-221ENST00000638141 SPENQ96T58 3664 aaKnown RBP9.04□□□□□ -0.96
CAPN3-221ENST00000638141 UCNP55089 124 aa9.04□□□□□ -0.96
CAPN3-221ENST00000638141 LYPD2Q6UXB3 125 aa9.04□□□□□ -0.96
CAPN3-221ENST00000638141 SMG1Q96Q15 3661 aaKnown RBP9.04□□□□□ -0.96
CAPN3-221ENST00000638141 ZGRF1Q86YA3 2104 aa9.04□□□□□ -0.96
CAPN3-221ENST00000638141 A0A0J9YXY3 114 aa9.04□□□□□ -0.96
CAPN3-221ENST00000638141 IGFL4Q6B9Z1 124 aa9.04□□□□□ -0.96
CAPN3-221ENST00000638141 LITAFQ99732 161 aa9.04□□□□□ -0.96
CAPN3-221ENST00000638141 POLR2KP53803 58 aaKnown RBP9.03□□□□□ -0.96
CAPN3-221ENST00000638141 IGFL2Q6UWQ7 119 aa9.03□□□□□ -0.96
CAPN3-221ENST00000638141 DAND5Q8N907 189 aa9.03□□□□□ -0.96
CAPN3-221ENST00000638141 KLK9Q2XQG4 91 aa9.02□□□□□ -0.96
CAPN3-221ENST00000638141 KLK9Q9UKQ9 250 aa9.02□□□□□ -0.96
CAPN3-221ENST00000638141 CTSGP08311 255 aa9.02□□□□□ -0.97
CAPN3-221ENST00000638141 SEM1Q6ZVN7 128 aa9.02□□□□□ -0.97
CAPN3-221ENST00000638141 DYNLRB1Q9NP97 96 aa9.02□□□□□ -0.97
CAPN3-221ENST00000638141 NXPH4O95158 308 aa9.01□□□□□ -0.97
CAPN3-221ENST00000638141 VCYO14598 125 aa9.01□□□□□ -0.97
CAPN3-221ENST00000638141 BUB3O43684 328 aa9.01□□□□□ -0.97
CAPN3-221ENST00000638141 Q5XG85 94 aa9.01□□□□□ -0.97
CAPN3-221ENST00000638141 I3L3M4 83 aa9□□□□□ -0.97
CAPN3-221ENST00000638141 K7ENP7 123 aa9□□□□□ -0.97
CAPN3-221ENST00000638141 DEFB109BQ30KR1 87 aa9□□□□□ -0.97
CAPN3-221ENST00000638141 CLEC2BQ92478 149 aa9□□□□□ -0.97
CAPN3-221ENST00000638141 TIMM21Q9BVV7 248 aa9□□□□□ -0.97
CAPN3-221ENST00000638141 hADV29S1A0JD25 119 aa9□□□□□ -0.97
CAPN3-221ENST00000638141 TMEM61Q8N0U2 210 aa9□□□□□ -0.97
CAPN3-221ENST00000638141 DUX5Q96PT3 197 aa9□□□□□ -0.97
CAPN3-221ENST00000638141 KALRNO60229 2985 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms