RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 J3QKU1 62 aa15.9■□□□□ 0.14
CLN6-224ENST00000638076 DPM2O94777 84 aa15.9■□□□□ 0.14
CLN6-224ENST00000638076 CHD6Q8TD26 2715 aa15.9■□□□□ 0.14
CLN6-224ENST00000638076 F5H697 171 aa15.9■□□□□ 0.14
CLN6-224ENST00000638076 FAM74A4Q5TZK3 123 aa15.9■□□□□ 0.14
CLN6-224ENST00000638076 PCP2Q8IVA1 136 aa15.9■□□□□ 0.14
CLN6-224ENST00000638076 CCDC168Q8NDH2 2452 aa15.89■□□□□ 0.13
CLN6-224ENST00000638076 SYT8Q8NBV8 401 aa15.89■□□□□ 0.13
CLN6-224ENST00000638076 TMEM160Q9NX00 188 aa15.89■□□□□ 0.13
CLN6-224ENST00000638076 MRPL35Q9NZE8 188 aaKnown RBP15.89■□□□□ 0.13
CLN6-224ENST00000638076 NEGR1Q7Z3B1 354 aa15.89■□□□□ 0.13
CLN6-224ENST00000638076 DYNLRB2Q8TF09 96 aa15.89■□□□□ 0.13
CLN6-224ENST00000638076 SCGB3A1Q96QR1 104 aa15.89■□□□□ 0.13
CLN6-224ENST00000638076 A0A087WX48 190 aa15.88■□□□□ 0.13
CLN6-224ENST00000638076 TRAV2A0A0B4J234 112 aa15.88■□□□□ 0.13
CLN6-224ENST00000638076 HLA-DRB4P13762 266 aa15.88■□□□□ 0.13
CLN6-224ENST00000638076 HLA-DRB4X5D2U9 266 aa15.88■□□□□ 0.13
CLN6-224ENST00000638076 FLNAP21333 2647 aaKnown RBP15.88■□□□□ 0.13
CLN6-224ENST00000638076 RBMY1A1P0DJD3 496 aaKnown RBP15.88■□□□□ 0.13
CLN6-224ENST00000638076 RBMY1CP0DJD4 496 aa15.88■□□□□ 0.13
CLN6-224ENST00000638076 KRTAP1-1Q07627 177 aa15.88■□□□□ 0.13
CLN6-224ENST00000638076 RBMY1FQ15415 496 aaKnown RBP15.88■□□□□ 0.13
CLN6-224ENST00000638076 COX11Q9Y6N1 276 aa15.88■□□□□ 0.13
CLN6-224ENST00000638076 CUBNO60494 3623 aa15.87■□□□□ 0.13
CLN6-224ENST00000638076 H3BMM0 161 aa15.87■□□□□ 0.13
CLN6-224ENST00000638076 ZC2HC1BQ5TFG8 222 aa15.87■□□□□ 0.13
CLN6-224ENST00000638076 C2orf66Q6UXQ4 117 aa15.87■□□□□ 0.13
CLN6-224ENST00000638076 C11orf44Q8N8P7 122 aa15.87■□□□□ 0.13
CLN6-224ENST00000638076 PDZD2O15018 2839 aa15.87■□□□□ 0.13
CLN6-224ENST00000638076 IGKV2D-26A0A0A0MRZ7 120 aa15.86■□□□□ 0.13
CLN6-224ENST00000638076 GTSCR1Q86UQ5 136 aa15.86■□□□□ 0.13
CLN6-224ENST00000638076 ORAOV1Q8WV07 137 aa15.86■□□□□ 0.13
CLN6-224ENST00000638076 TRGV11A0A075B6L2 103 aa15.85■□□□□ 0.13
CLN6-224ENST00000638076 CBY3A6NI87 242 aa15.85■□□□□ 0.13
CLN6-224ENST00000638076 RPL32P62910 135 aaKnown RBP15.85■□□□□ 0.13
CLN6-224ENST00000638076 DEFB114Q30KQ6 69 aa15.85■□□□□ 0.13
CLN6-224ENST00000638076 YAE1D1Q9NRH1 226 aa15.85■□□□□ 0.13
CLN6-224ENST00000638076 RBMY1BA6NDE4 496 aaKnown RBP15.85■□□□□ 0.13
CLN6-224ENST00000638076 RBMY1EA6NEQ0 496 aaKnown RBP15.85■□□□□ 0.13
CLN6-224ENST00000638076 RBMY1DP0C7P1 496 aaKnown RBP15.85■□□□□ 0.13
CLN6-224ENST00000638076 POLR2KP53803 58 aaKnown RBP15.85■□□□□ 0.13
CLN6-224ENST00000638076 A8MTW9 85 aa15.84■□□□□ 0.13
CLN6-224ENST00000638076 CRYGDP07320 174 aa15.84■□□□□ 0.13
CLN6-224ENST00000638076 TMEM97Q5BJF2 176 aa15.84■□□□□ 0.13
CLN6-224ENST00000638076 RAX2Q96IS3 184 aa15.84■□□□□ 0.13
CLN6-224ENST00000638076 TRAV12-1A0A0B4J245 112 aa15.84■□□□□ 0.13
CLN6-224ENST00000638076 A0A1W2PRX2 142 aa15.84■□□□□ 0.13
CLN6-224ENST00000638076 SIVA1O15304 175 aa15.84■□□□□ 0.13
CLN6-224ENST00000638076 HTN1P15515 57 aa15.84■□□□□ 0.13
CLN6-224ENST00000638076 ZNF56Q15929 161 aa15.84■□□□□ 0.13
CLN6-224ENST00000638076 CD300EQ496F6 205 aaPredicted RBP15.84■□□□□ 0.13
CLN6-224ENST00000638076 MAP6D1Q9H9H5 199 aa15.84■□□□□ 0.13
CLN6-224ENST00000638076 ZNF876PQ49A33 203 aa15.83■□□□□ 0.12
CLN6-224ENST00000638076 DEFB104AQ8WTQ1 72 aa15.83■□□□□ 0.12
CLN6-224ENST00000638076 SDHAF1A6NFY7 115 aa15.82■□□□□ 0.12
CLN6-224ENST00000638076 F8VRH5 84 aa15.82■□□□□ 0.12
CLN6-224ENST00000638076 H7C1H1 209 aa15.82■□□□□ 0.12
CLN6-224ENST00000638076 CD28P10747 220 aa15.82■□□□□ 0.12
CLN6-224ENST00000638076 PLNP26678 52 aa15.82■□□□□ 0.12
CLN6-224ENST00000638076 NEXN-AS1Q8NBZ9 246 aa15.82■□□□□ 0.12
CLN6-224ENST00000638076 TTTY13Q9BZ97 58 aa15.82■□□□□ 0.12
CLN6-224ENST00000638076 VCYO14598 125 aa15.82■□□□□ 0.12
CLN6-224ENST00000638076 TAX1BP3O14907 124 aa15.82■□□□□ 0.12
CLN6-224ENST00000638076 ERASQ7Z444 233 aa15.81■□□□□ 0.12
CLN6-224ENST00000638076 BAALCQ8WXS3 180 aa15.81■□□□□ 0.12
CLN6-224ENST00000638076 KIR2DL4Q99706 377 aa15.81■□□□□ 0.12
CLN6-224ENST00000638076 M0QY20 66 aa15.8■□□□□ 0.12
CLN6-224ENST00000638076 ZFP2Q6ZN57 461 aa15.8■□□□□ 0.12
CLN6-224ENST00000638076 CHTOPQ9Y3Y2 248 aaKnown RBP15.8■□□□□ 0.12
CLN6-224ENST00000638076 TRBV6-5A0A0K0K1A5 114 aa15.8■□□□□ 0.12
CLN6-224ENST00000638076 MORN3Q6PF18 240 aaPredicted RBP15.79■□□□□ 0.12
CLN6-224ENST00000638076 SPAG8Q99932 426 aaPredicted RBP15.79■□□□□ 0.12
CLN6-224ENST00000638076 CYSLTR1Q9Y271 337 aa15.79■□□□□ 0.12
CLN6-224ENST00000638076 ZNF256Q9Y2P7 627 aaPredicted RBP15.79■□□□□ 0.12
CLN6-224ENST00000638076 NF1P21359 2839 aa15.79■□□□□ 0.12
CLN6-224ENST00000638076 PRM2P04554 102 aa15.79■□□□□ 0.12
CLN6-224ENST00000638076 FHL3Q13643 280 aa15.79■□□□□ 0.12
CLN6-224ENST00000638076 KMT2BQ9UMN6 2715 aaPredicted RBP15.79■□□□□ 0.12
CLN6-224ENST00000638076 TRBV27A0A0K0K1C4 114 aa15.78■□□□□ 0.12
CLN6-224ENST00000638076 CCL24O00175 119 aa15.78■□□□□ 0.12
CLN6-224ENST00000638076 PCP4P48539 62 aa15.78■□□□□ 0.12
CLN6-224ENST00000638076 HSD52Q0P140 79 aa15.78■□□□□ 0.12
CLN6-224ENST00000638076 TP53TG1Q9Y2A0 90 aa15.78■□□□□ 0.12
CLN6-224ENST00000638076 SEC11AP67812 179 aa15.78■□□□□ 0.12
CLN6-224ENST00000638076 C21orf62-AS1Q17RA5 79 aa15.78■□□□□ 0.12
CLN6-224ENST00000638076 CITED2Q99967 270 aaPredicted RBP15.77■□□□□ 0.12
CLN6-224ENST00000638076 ANK3Q12955 4377 aaKnown RBP15.76■□□□□ 0.11
CLN6-224ENST00000638076 TRPT1Q86TN4 253 aaKnown RBP15.76■□□□□ 0.11
CLN6-224ENST00000638076 LINC01006Q8NI28 216 aa15.76■□□□□ 0.11
CLN6-224ENST00000638076 PRSS29PA6NIE9 313 aa15.76■□□□□ 0.11
CLN6-224ENST00000638076 RNASE1P07998 156 aaKnown RBP15.76■□□□□ 0.11
CLN6-224ENST00000638076 RPL39P62891 51 aaKnown RBP15.76■□□□□ 0.11
CLN6-224ENST00000638076 ITPR2Q14571 2701 aa15.75■□□□□ 0.11
CLN6-224ENST00000638076 TSHBP01222 138 aa15.74■□□□□ 0.11
CLN6-224ENST00000638076 TRAV8-6A0A0B4J262 113 aa15.74■□□□□ 0.11
CLN6-224ENST00000638076 LINC01549A6NIU2 74 aa15.74■□□□□ 0.11
CLN6-224ENST00000638076 IGIPA6NJ69 53 aa15.74■□□□□ 0.11
CLN6-224ENST00000638076 TSSC4Q9Y5U2 329 aaPredicted RBP15.74■□□□□ 0.11
CLN6-224ENST00000638076 ACANP16112 2415 aa15.74■□□□□ 0.11
CLN6-224ENST00000638076 PTTG1IPP53801 180 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms