RNA–Protein interactions for RNA: ENST00000637941.1

TCF4-289, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 2,115 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-289ENST00000637941 SRSF9Q13242 221 aaKnown RBP eCLIP9.51□□□□□ -0.89
TCF4-289ENST00000637941 ZNF843Q8N446 348 aa9.51□□□□□ -0.89
TCF4-289ENST00000637941 AGRNO00468 2067 aa9.5□□□□□ -0.89
TCF4-289ENST00000637941 IGHV3-16A0A0C4DH30 117 aa9.5□□□□□ -0.89
TCF4-289ENST00000637941 J3QLI3 93 aa9.5□□□□□ -0.89
TCF4-289ENST00000637941 TRPT1Q86TN4 253 aaKnown RBP9.5□□□□□ -0.89
TCF4-289ENST00000637941 SELENOKQ9Y6D0 94 aa9.5□□□□□ -0.89
TCF4-289ENST00000637941 IGLV4-69A0A075B6H9 119 aa9.5□□□□□ -0.89
TCF4-289ENST00000637941 A0A087WWL8 130 aa9.5□□□□□ -0.89
TCF4-289ENST00000637941 K7EQG2 157 aa9.5□□□□□ -0.89
TCF4-289ENST00000637941 CRYGDP07320 174 aa9.5□□□□□ -0.89
TCF4-289ENST00000637941 TRGV11A0A075B6L2 103 aa9.49□□□□□ -0.89
TCF4-289ENST00000637941 IGHV1OR15-1A0A075B7D0 117 aa9.49□□□□□ -0.89
TCF4-289ENST00000637941 ZNF688P0C7X2 276 aa9.49□□□□□ -0.89
TCF4-289ENST00000637941 ZNF56Q15929 161 aa9.49□□□□□ -0.89
TCF4-289ENST00000637941 NSUN5P1Q3KNT7 163 aa9.49□□□□□ -0.89
TCF4-289ENST00000637941 GAGE13Q4V321 117 aa9.49□□□□□ -0.89
TCF4-289ENST00000637941 LINC01356Q8N9X3 169 aa9.49□□□□□ -0.89
TCF4-289ENST00000637941 TEX48A0A1B0GUV7 120 aa9.49□□□□□ -0.89
TCF4-289ENST00000637941 CD300EQ496F6 205 aaPredicted RBP9.49□□□□□ -0.89
TCF4-289ENST00000637941 SPANXB1Q9NS25 103 aaPredicted RBP9.49□□□□□ -0.89
TCF4-289ENST00000637941 MRPL16Q9NX20 251 aaKnown RBP9.49□□□□□ -0.89
TCF4-289ENST00000637941 IGSF10Q6WRI0 2623 aa9.48□□□□□ -0.89
TCF4-289ENST00000637941 TSHBP01222 138 aa9.48□□□□□ -0.89
TCF4-289ENST00000637941 FAM74A4Q5TZK3 123 aa9.48□□□□□ -0.89
TCF4-289ENST00000637941 RNF152Q8N8N0 203 aa9.48□□□□□ -0.89
TCF4-289ENST00000637941 JPT2Q9H910 190 aa9.48□□□□□ -0.89
TCF4-289ENST00000637941 AKAP6Q13023 2319 aa9.48□□□□□ -0.89
TCF4-289ENST00000637941 H3BMG7 143 aa9.47□□□□□ -0.89
TCF4-289ENST00000637941 ELANEP08246 267 aa9.47□□□□□ -0.89
TCF4-289ENST00000637941 UBE2D1P51668 147 aa9.47□□□□□ -0.89
TCF4-289ENST00000637941 ZNF876PQ49A33 203 aa9.47□□□□□ -0.89
TCF4-289ENST00000637941 PGPEP1Q9NXJ5 209 aa9.47□□□□□ -0.89
TCF4-289ENST00000637941 AVPP01185 164 aa9.47□□□□□ -0.89
TCF4-289ENST00000637941 IGHV4-59P01825 116 aa9.47□□□□□ -0.89
TCF4-289ENST00000637941 DEFB112Q30KQ8 113 aa9.47□□□□□ -0.89
TCF4-289ENST00000637941 TMEM95Q3KNT9 176 aa9.47□□□□□ -0.89
TCF4-289ENST00000637941 DLX4Q92988 240 aaPredicted RBP9.47□□□□□ -0.89
TCF4-289ENST00000637941 M0QY20 66 aa9.46□□□□□ -0.89
TCF4-289ENST00000637941 LGALS3P17931 250 aaKnown RBP9.46□□□□□ -0.89
TCF4-289ENST00000637941 EDN2P20800 178 aa9.46□□□□□ -0.89
TCF4-289ENST00000637941 RPL39P62891 51 aaKnown RBP9.46□□□□□ -0.89
TCF4-289ENST00000637941 TMEM170BQ5T4T1 132 aa9.46□□□□□ -0.89
TCF4-289ENST00000637941 MORN3Q6PF18 240 aaPredicted RBP9.46□□□□□ -0.89
TCF4-289ENST00000637941 NFE4Q86UQ8 179 aa9.46□□□□□ -0.89
TCF4-289ENST00000637941 Q8N1Y9 231 aa9.46□□□□□ -0.89
TCF4-289ENST00000637941 DOPEY1Q5JWR5 2465 aa9.46□□□□□ -0.9
TCF4-289ENST00000637941 A0A0J9YY99 117 aa9.46□□□□□ -0.9
TCF4-289ENST00000637941 WFDC2Q14508 124 aa9.46□□□□□ -0.9
TCF4-289ENST00000637941 WFDC12Q8WWY7 111 aa9.46□□□□□ -0.9
TCF4-289ENST00000637941 PLEKHB2Q96CS7 222 aa9.46□□□□□ -0.9
TCF4-289ENST00000637941 ZNF256Q9Y2P7 627 aaPredicted RBP9.46□□□□□ -0.9
TCF4-289ENST00000637941 CSMD1Q96PZ7 3565 aa9.45□□□□□ -0.9
TCF4-289ENST00000637941 USP24Q9UPU5 2620 aa9.45□□□□□ -0.9
TCF4-289ENST00000637941 I3L3M4 83 aa9.45□□□□□ -0.9
TCF4-289ENST00000637941 MDFICQ9P1T7 246 aa9.45□□□□□ -0.9
TCF4-289ENST00000637941 CFAP46Q8IYW2 2715 aa9.45□□□□□ -0.9
TCF4-289ENST00000637941 TRAV12-2A0A075B6T6 113 aa9.44□□□□□ -0.9
TCF4-289ENST00000637941 EDA2RQ9HAV5 297 aa9.44□□□□□ -0.9
TCF4-289ENST00000637941 VPREB3Q9UKI3 123 aa9.44□□□□□ -0.9
TCF4-289ENST00000637941 LEPROTO15243 131 aa9.44□□□□□ -0.9
TCF4-289ENST00000637941 IGKV3-20P01619 116 aa9.44□□□□□ -0.9
TCF4-289ENST00000637941 SCGB1A1P11684 91 aa9.44□□□□□ -0.9
TCF4-289ENST00000637941 SYNJ2BPP57105 145 aa9.44□□□□□ -0.9
TCF4-289ENST00000637941 SPINK13Q1W4C9 94 aa9.44□□□□□ -0.9
TCF4-289ENST00000637941 SLC25A29Q8N8R3 303 aa9.44□□□□□ -0.9
TCF4-289ENST00000637941 KLHL30-AS1Q8NEE0 82 aa9.44□□□□□ -0.9
TCF4-289ENST00000637941 NRGNQ92686 78 aa9.44□□□□□ -0.9
TCF4-289ENST00000637941 UBE2E2Q96LR5 201 aa9.44□□□□□ -0.9
TCF4-289ENST00000637941 J3QQQ9 107 aa9.43□□□□□ -0.9
TCF4-289ENST00000637941 ATP6V0E2Q8NHE4 81 aa9.43□□□□□ -0.9
TCF4-289ENST00000637941 PRO0461Q9UI25 63 aa9.43□□□□□ -0.9
TCF4-289ENST00000637941 SPTAN1Q13813 2472 aaKnown RBP9.43□□□□□ -0.9
TCF4-289ENST00000637941 EMP1P54849 157 aa9.43□□□□□ -0.9
TCF4-289ENST00000637941 AMTNQ6UX39 209 aa9.43□□□□□ -0.9
TCF4-289ENST00000637941 C20orf203Q8NBC4 194 aa9.43□□□□□ -0.9
TCF4-289ENST00000637941 TRBV20-1A0A075B6N2 111 aa9.42□□□□□ -0.9
TCF4-289ENST00000637941 TSPAN13O95857 204 aa9.42□□□□□ -0.9
TCF4-289ENST00000637941 ETDBQ3ZM63 59 aa9.42□□□□□ -0.9
TCF4-289ENST00000637941 ZNRF2Q8NHG8 242 aa9.42□□□□□ -0.9
TCF4-289ENST00000637941 SIGMAR1Q99720 223 aa9.42□□□□□ -0.9
TCF4-289ENST00000637941 TRAV2A0A0B4J234 112 aa9.41□□□□□ -0.9
TCF4-289ENST00000637941 HOXD3P31249 432 aaPredicted RBP9.41□□□□□ -0.9
TCF4-289ENST00000637941 CRYBA4P53673 196 aa9.41□□□□□ -0.9
TCF4-289ENST00000637941 NDUFA11Q86Y39 141 aa9.41□□□□□ -0.9
TCF4-289ENST00000637941 LOC107984156A0A0G2JMH3 177 aa9.41□□□□□ -0.9
TCF4-289ENST00000637941 TMEM223A0PJW6 202 aa9.41□□□□□ -0.9
TCF4-289ENST00000637941 APOMO95445 188 aa9.41□□□□□ -0.9
TCF4-289ENST00000637941 IGHV3-30P01768 117 aa9.41□□□□□ -0.9
TCF4-289ENST00000637941 IGHV3-30-5P0DP03 117 aa9.41□□□□□ -0.9
TCF4-289ENST00000637941 UBE2D3P61077 147 aa9.41□□□□□ -0.9
TCF4-289ENST00000637941 UBE2D2P62837 147 aa9.41□□□□□ -0.9
TCF4-289ENST00000637941 PIK3CD-AS1Q5SR53 167 aa9.41□□□□□ -0.9
TCF4-289ENST00000637941 ARL17AQ8IVW1 177 aa9.41□□□□□ -0.9
TCF4-289ENST00000637941 VCX2Q9H322 139 aa9.41□□□□□ -0.9
TCF4-289ENST00000637941 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.4□□□□□ -0.9
TCF4-289ENST00000637941 GAGE12HA6NDE8 117 aa9.4□□□□□ -0.9
TCF4-289ENST00000637941 TGFAP01135 160 aa9.4□□□□□ -0.9
TCF4-289ENST00000637941 C10orf99Q6UWK7 81 aa9.4□□□□□ -0.9
TCF4-289ENST00000637941 PYGO1Q9Y3Y4 419 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms