RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	RLF	Q13129	1914 aa		12.8	□□□□□ -0.36
CACNA1A-238	ENST00000637276	MALRD1	Q5VYJ5	2156 aa		12.8	□□□□□ -0.36
CACNA1A-238	ENST00000637276	QRFP	P83859	136 aa		12.8	□□□□□ -0.36
CACNA1A-238	ENST00000637276	ZNF726P1	Q15940	193 aa		12.8	□□□□□ -0.36
CACNA1A-238	ENST00000637276	POM121L12	Q8N7R1	296 aa		12.8	□□□□□ -0.36
CACNA1A-238	ENST00000637276	TRBV12-3	P01733	135 aa		12.79	□□□□□ -0.36
CACNA1A-238	ENST00000637276	C12orf74	Q32Q52	190 aa		12.79	□□□□□ -0.36
CACNA1A-238	ENST00000637276	C16orf74	Q96GX8	76 aa		12.79	□□□□□ -0.36
CACNA1A-238	ENST00000637276	TRAV1-1	A0A0B4J248	108 aa		12.79	□□□□□ -0.36
CACNA1A-238	ENST00000637276		K7EM74	188 aa		12.79	□□□□□ -0.36
CACNA1A-238	ENST00000637276	C9orf85	Q96MD7	179 aa		12.79	□□□□□ -0.36
CACNA1A-238	ENST00000637276	GPR179	Q6PRD1	2367 aa		12.79	□□□□□ -0.36
CACNA1A-238	ENST00000637276	C11orf45	Q8TAV5	145 aa		12.79	□□□□□ -0.36
CACNA1A-238	ENST00000637276	NDUFA4L2	Q9NRX3	87 aa		12.79	□□□□□ -0.36
CACNA1A-238	ENST00000637276		K7EP13	123 aa		12.79	□□□□□ -0.36
CACNA1A-238	ENST00000637276	NDUFA1	O15239	70 aa		12.79	□□□□□ -0.36
CACNA1A-238	ENST00000637276	SMIM20	Q8N5G0	67 aa		12.79	□□□□□ -0.36
CACNA1A-238	ENST00000637276	ZNF503-AS2	A6NEH8	195 aa		12.79	□□□□□ -0.36
CACNA1A-238	ENST00000637276	SMAD5-AS1	Q9Y6J3	95 aa		12.79	□□□□□ -0.36
CACNA1A-238	ENST00000637276	TRBV10-2	A0A0K0K1G8	114 aa		12.78	□□□□□ -0.36
CACNA1A-238	ENST00000637276		Q6ZS92	163 aa		12.78	□□□□□ -0.36
CACNA1A-238	ENST00000637276	SPAG11B	Q08648	103 aa		12.78	□□□□□ -0.36
CACNA1A-238	ENST00000637276	ZNF493	Q6ZR52	646 aa		12.77	□□□□□ -0.36
CACNA1A-238	ENST00000637276	OPRPN	Q99935	248 aa	Predicted RBP	12.77	□□□□□ -0.36
CACNA1A-238	ENST00000637276	IGLC7	A0M8Q6	106 aa		12.77	□□□□□ -0.37
CACNA1A-238	ENST00000637276		H3BRN7	92 aa		12.76	□□□□□ -0.37
CACNA1A-238	ENST00000637276		K7EP34	96 aa		12.76	□□□□□ -0.37
CACNA1A-238	ENST00000637276	SERTAD4-AS1	Q5TG53	156 aa		12.76	□□□□□ -0.37
CACNA1A-238	ENST00000637276	ZNF833P	Q6ZTB9	187 aa		12.76	□□□□□ -0.37
CACNA1A-238	ENST00000637276	FOXI2	Q6ZQN5	318 aa		12.76	□□□□□ -0.37
CACNA1A-238	ENST00000637276	CRYGD	P07320	174 aa		12.76	□□□□□ -0.37
CACNA1A-238	ENST00000637276		V9GYV3	84 aa		12.76	□□□□□ -0.37
CACNA1A-238	ENST00000637276	NCOA6	Q14686	2063 aa	Predicted RBP	12.75	□□□□□ -0.37
CACNA1A-238	ENST00000637276	LINC00526	Q96FQ7	95 aa		12.75	□□□□□ -0.37
CACNA1A-238	ENST00000637276	PKIG	Q9Y2B9	76 aa		12.75	□□□□□ -0.37
CACNA1A-238	ENST00000637276		F8W1H4	67 aa		12.75	□□□□□ -0.37
CACNA1A-238	ENST00000637276	LOXL1	Q08397	574 aa	Predicted RBP	12.75	□□□□□ -0.37
CACNA1A-238	ENST00000637276	DIRC1	Q969H9	104 aa		12.75	□□□□□ -0.37
CACNA1A-238	ENST00000637276	FAM208B	Q5VWN6	2430 aa		12.75	□□□□□ -0.37
CACNA1A-238	ENST00000637276	C3orf84	H3BNL1	204 aa		12.75	□□□□□ -0.37
CACNA1A-238	ENST00000637276	ZNF492	Q9P255	531 aa		12.75	□□□□□ -0.37
CACNA1A-238	ENST00000637276	LOX	P28300	417 aa	Predicted RBP	12.75	□□□□□ -0.37
CACNA1A-238	ENST00000637276		Q6ZR03	302 aa		12.75	□□□□□ -0.37
CACNA1A-238	ENST00000637276	THSD7A	Q9UPZ6	1657 aa		12.75	□□□□□ -0.37
CACNA1A-238	ENST00000637276	INAFM1	C9JVW0	142 aa		12.75	□□□□□ -0.37
CACNA1A-238	ENST00000637276	COX8A	P10176	69 aa		12.74	□□□□□ -0.37
CACNA1A-238	ENST00000637276	SPG11	Q96JI7	2443 aa		12.74	□□□□□ -0.37
CACNA1A-238	ENST00000637276	IGKV2-28	A0A075B6P5	120 aa		12.74	□□□□□ -0.37
CACNA1A-238	ENST00000637276	IGKV2D-28	P01615	120 aa		12.74	□□□□□ -0.37
CACNA1A-238	ENST00000637276	PDE6H	Q13956	83 aa		12.74	□□□□□ -0.37
CACNA1A-238	ENST00000637276	CT83	Q5H943	113 aa		12.74	□□□□□ -0.37
CACNA1A-238	ENST00000637276		K7EN84	100 aa		12.74	□□□□□ -0.37
CACNA1A-238	ENST00000637276	LINC00269	Q8N2A0	174 aa		12.74	□□□□□ -0.37
CACNA1A-238	ENST00000637276	LINC00482	Q8N8I6	264 aa		12.74	□□□□□ -0.37
CACNA1A-238	ENST00000637276	CDPF1	Q6NVV7	123 aa		12.73	□□□□□ -0.37
CACNA1A-238	ENST00000637276		A4D1N5	150 aa		12.73	□□□□□ -0.37
CACNA1A-238	ENST00000637276	RPL37AP8	A6NKH3	93 aa		12.73	□□□□□ -0.37
CACNA1A-238	ENST00000637276	CFC1B	P0CG36	223 aa		12.73	□□□□□ -0.37
CACNA1A-238	ENST00000637276	CFC1	P0CG37	223 aa		12.73	□□□□□ -0.37
CACNA1A-238	ENST00000637276	XAGE1A	Q9HD64	81 aa		12.73	□□□□□ -0.37
CACNA1A-238	ENST00000637276	IGLV2-8	P01709	118 aa		12.72	□□□□□ -0.37
CACNA1A-238	ENST00000637276	CRYGB	P07316	175 aa		12.72	□□□□□ -0.37
CACNA1A-238	ENST00000637276	WT1-AS	Q06250	92 aa		12.72	□□□□□ -0.37
CACNA1A-238	ENST00000637276		Q8NFD4	153 aa		12.72	□□□□□ -0.37
CACNA1A-238	ENST00000637276	SPINK1	P00995	79 aa		12.72	□□□□□ -0.37
CACNA1A-238	ENST00000637276	SON	P18583	2426 aa	Known RBP	12.72	□□□□□ -0.37
CACNA1A-238	ENST00000637276		Q0VG73	95 aa		12.72	□□□□□ -0.37
CACNA1A-238	ENST00000637276	SIPA1L1	O43166	1804 aa		12.71	□□□□□ -0.37
CACNA1A-238	ENST00000637276		A0A0J9YXV3	536 aa		12.71	□□□□□ -0.37
CACNA1A-238	ENST00000637276		F8VRH5	84 aa		12.71	□□□□□ -0.37
CACNA1A-238	ENST00000637276	UBE2D2	P62837	147 aa		12.71	□□□□□ -0.37
CACNA1A-238	ENST00000637276	FXYD5	Q96DB9	178 aa		12.71	□□□□□ -0.37
CACNA1A-238	ENST00000637276	PRR14L	Q5THK1	2151 aa		12.71	□□□□□ -0.38
CACNA1A-238	ENST00000637276	MIR7-3HG	Q8N6C7	128 aa		12.71	□□□□□ -0.38
CACNA1A-238	ENST00000637276	PLXNB1	O43157	2135 aa		12.7	□□□□□ -0.38
CACNA1A-238	ENST00000637276		Q8N1Y9	231 aa		12.7	□□□□□ -0.38
CACNA1A-238	ENST00000637276	POU2AF1	Q16633	256 aa		12.7	□□□□□ -0.38
CACNA1A-238	ENST00000637276	MSRB1	Q9NZV6	116 aa		12.7	□□□□□ -0.38
CACNA1A-238	ENST00000637276	IGLV2-11	P01706	119 aa		12.7	□□□□□ -0.38
CACNA1A-238	ENST00000637276	PLA2G2E	Q9NZK7	142 aa		12.7	□□□□□ -0.38
CACNA1A-238	ENST00000637276	KIAA1549	Q9HCM3	1950 aa		12.69	□□□□□ -0.38
CACNA1A-238	ENST00000637276		J3QLI3	93 aa		12.69	□□□□□ -0.38
CACNA1A-238	ENST00000637276	UPK3B	Q9BT76	320 aa		12.69	□□□□□ -0.38
CACNA1A-238	ENST00000637276	YPEL3	P61236	119 aa	Predicted RBP	12.69	□□□□□ -0.38
CACNA1A-238	ENST00000637276	TTTY13	Q9BZ97	58 aa		12.69	□□□□□ -0.38
CACNA1A-238	ENST00000637276		A0A0B4J2C4	111 aa		12.69	□□□□□ -0.38
CACNA1A-238	ENST00000637276	SDIM1	Q6ZPB5	146 aa		12.68	□□□□□ -0.38
CACNA1A-238	ENST00000637276	VWA8	A3KMH1	1905 aa		12.68	□□□□□ -0.38
CACNA1A-238	ENST00000637276	NANOS2	P60321	138 aa	Known RBP	12.68	□□□□□ -0.38
CACNA1A-238	ENST00000637276	C1orf158	Q8N1D5	194 aa		12.68	□□□□□ -0.38
CACNA1A-238	ENST00000637276	WFDC13	Q8IUB5	93 aa		12.68	□□□□□ -0.38
CACNA1A-238	ENST00000637276	FAM30A	Q9NZY2	134 aa		12.68	□□□□□ -0.38
CACNA1A-238	ENST00000637276	SERP1	Q9Y6X1	66 aa		12.68	□□□□□ -0.38
CACNA1A-238	ENST00000637276	IGHV2-5	P01817	119 aa		12.68	□□□□□ -0.38
CACNA1A-238	ENST00000637276	DSCAM	O60469	2012 aa		12.67	□□□□□ -0.38
CACNA1A-238	ENST00000637276	TRBV6-6	A0A0A6YYG2	114 aa		12.67	□□□□□ -0.38
CACNA1A-238	ENST00000637276	LGALS9B	Q3B8N2	356 aa		12.67	□□□□□ -0.38
CACNA1A-238	ENST00000637276	LGALS9C	Q6DKI2	356 aa		12.67	□□□□□ -0.38
CACNA1A-238	ENST00000637276		Q6Q795	121 aa		12.67	□□□□□ -0.38
CACNA1A-238	ENST00000637276	LINC00173	Q6ZV60	143 aa		12.67	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms