RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 Q6ZTI0 123 aa9.56□□□□□ -0.88
LINC00643-207ENST00000637212 C14orf178Q8N769 122 aaPredicted RBP9.56□□□□□ -0.88
LINC00643-207ENST00000637212 DPH3P1Q9H4G8 78 aa9.56□□□□□ -0.88
LINC00643-207ENST00000637212 DKK2Q9UBU2 259 aa9.56□□□□□ -0.88
LINC00643-207ENST00000637212 TRAPPC1Q9Y5R8 145 aa9.56□□□□□ -0.88
LINC00643-207ENST00000637212 APCSP02743 223 aa9.55□□□□□ -0.88
LINC00643-207ENST00000637212 FAM222AQ5U5X8 452 aa9.55□□□□□ -0.88
LINC00643-207ENST00000637212 CFAP126Q5VTH2 177 aa9.55□□□□□ -0.88
LINC00643-207ENST00000637212 POM121L12Q8N7R1 296 aa9.55□□□□□ -0.88
LINC00643-207ENST00000637212 TRGV2A0A075B6R0 118 aa9.54□□□□□ -0.88
LINC00643-207ENST00000637212 TRAV4A0A0B4J268 109 aa9.54□□□□□ -0.88
LINC00643-207ENST00000637212 GAGE12BA1L429 117 aa9.54□□□□□ -0.88
LINC00643-207ENST00000637212 RHODO00212 210 aa9.54□□□□□ -0.88
LINC00643-207ENST00000637212 DEFB4AO15263 64 aa9.54□□□□□ -0.88
LINC00643-207ENST00000637212 GAGE7O76087 117 aa9.54□□□□□ -0.88
LINC00643-207ENST00000637212 GAGE12FP0CL80 117 aa9.54□□□□□ -0.88
LINC00643-207ENST00000637212 GAGE12GP0CL81 117 aa9.54□□□□□ -0.88
LINC00643-207ENST00000637212 GAGE12IP0CL82 117 aa9.54□□□□□ -0.88
LINC00643-207ENST00000637212 RAB4AP20338 218 aa9.54□□□□□ -0.88
LINC00643-207ENST00000637212 LINC00315P59091 139 aa9.54□□□□□ -0.88
LINC00643-207ENST00000637212 UFSP1Q6NVU6 142 aa9.54□□□□□ -0.88
LINC00643-207ENST00000637212 OR4C5Q8NGB2 326 aa9.54□□□□□ -0.88
LINC00643-207ENST00000637212 MRPL18Q9H0U6 180 aaKnown RBP9.54□□□□□ -0.88
LINC00643-207ENST00000637212 JPT2Q9H910 190 aa9.54□□□□□ -0.88
LINC00643-207ENST00000637212 FABP9Q0Z7S8 132 aa9.53□□□□□ -0.88
LINC00643-207ENST00000637212 RNF185Q96GF1 192 aa9.53□□□□□ -0.88
LINC00643-207ENST00000637212 SAMD10Q9BYL1 202 aa9.53□□□□□ -0.88
LINC00643-207ENST00000637212 A0A087WWL8 130 aa9.52□□□□□ -0.89
LINC00643-207ENST00000637212 PPBPP02775 128 aa9.52□□□□□ -0.89
LINC00643-207ENST00000637212 DEFB130BP0DP73 79 aa9.52□□□□□ -0.89
LINC00643-207ENST00000637212 DEFB130AP0DP74 79 aa9.52□□□□□ -0.89
LINC00643-207ENST00000637212 PRKDCP78527 4128 aaKnown RBP9.52□□□□□ -0.89
LINC00643-207ENST00000637212 AMN1Q8IY45 258 aa9.52□□□□□ -0.89
LINC00643-207ENST00000637212 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.52□□□□□ -0.89
LINC00643-207ENST00000637212 MRAP2Q96G30 205 aa9.52□□□□□ -0.89
LINC00643-207ENST00000637212 TRGC2P03986 189 aa9.51□□□□□ -0.89
LINC00643-207ENST00000637212 DAD1P61803 113 aa9.51□□□□□ -0.89
LINC00643-207ENST00000637212 SLAQ13239 276 aa9.51□□□□□ -0.89
LINC00643-207ENST00000637212 MRPL51Q4U2R6 128 aaKnown RBP9.51□□□□□ -0.89
LINC00643-207ENST00000637212 U3KQK5 164 aa9.51□□□□□ -0.89
LINC00643-207ENST00000637212 A0A0J9YWU9 116 aa9.5□□□□□ -0.89
LINC00643-207ENST00000637212 F5H697 171 aa9.5□□□□□ -0.89
LINC00643-207ENST00000637212 PHOX2AO14813 284 aa9.5□□□□□ -0.89
LINC00643-207ENST00000637212 PPP1R17O96001 155 aa9.5□□□□□ -0.89
LINC00643-207ENST00000637212 ZNF479Q96JC4 524 aa9.5□□□□□ -0.89
LINC00643-207ENST00000637212 EDA2RQ9HAV5 297 aa9.5□□□□□ -0.89
LINC00643-207ENST00000637212 IGHV3-53P01767 116 aa9.49□□□□□ -0.89
LINC00643-207ENST00000637212 MGPP08493 103 aa9.49□□□□□ -0.89
LINC00643-207ENST00000637212 CKS2P33552 79 aa9.49□□□□□ -0.89
LINC00643-207ENST00000637212 FAM74A4Q5TZK3 123 aa9.49□□□□□ -0.89
LINC00643-207ENST00000637212 ORMDL3Q8N138 153 aa9.49□□□□□ -0.89
LINC00643-207ENST00000637212 CELA1Q9UNI1 258 aa9.49□□□□□ -0.89
LINC00643-207ENST00000637212 LAMTOR2Q9Y2Q5 125 aa9.49□□□□□ -0.89
LINC00643-207ENST00000637212 NBEAL2Q6ZNJ1 2754 aa9.48□□□□□ -0.89
LINC00643-207ENST00000637212 C1orf196B1AJZ1 125 aa9.48□□□□□ -0.89
LINC00643-207ENST00000637212 H7C1H1 209 aa9.48□□□□□ -0.89
LINC00643-207ENST00000637212 ATP5G1P05496 136 aa9.48□□□□□ -0.89
LINC00643-207ENST00000637212 FHL2Q14192 279 aa9.48□□□□□ -0.89
LINC00643-207ENST00000637212 C12orf74Q32Q52 190 aa9.48□□□□□ -0.89
LINC00643-207ENST00000637212 KIAA1644Q3SXP7 199 aa9.48□□□□□ -0.89
LINC00643-207ENST00000637212 SUMO4Q6EEV6 95 aa9.48□□□□□ -0.89
LINC00643-207ENST00000637212 C11orf45Q8TAV5 145 aa9.48□□□□□ -0.89
LINC00643-207ENST00000637212 ALKBH7Q9BT30 221 aaPredicted RBP9.48□□□□□ -0.89
LINC00643-207ENST00000637212 MUC4Q99102 2169 aa9.48□□□□□ -0.89
LINC00643-207ENST00000637212 IGHV3-73A0A0B4J1V6 119 aa9.47□□□□□ -0.89
LINC00643-207ENST00000637212 TRGV4A0A0C4DH28 118 aa9.47□□□□□ -0.89
LINC00643-207ENST00000637212 TRBV6-4A0A1B0GX49 114 aa9.47□□□□□ -0.89
LINC00643-207ENST00000637212 M0QY20 66 aa9.47□□□□□ -0.89
LINC00643-207ENST00000637212 ZNF56Q15929 161 aa9.47□□□□□ -0.89
LINC00643-207ENST00000637212 Q6ZSN1 163 aa9.47□□□□□ -0.89
LINC00643-207ENST00000637212 PRELID3AQ96N28 172 aa9.47□□□□□ -0.89
LINC00643-207ENST00000637212 TRBV10-1A0A0K0K1A3 114 aa9.46□□□□□ -0.9
LINC00643-207ENST00000637212 D6R8Y8 96 aa9.46□□□□□ -0.9
LINC00643-207ENST00000637212 GATA1P15976 413 aaPredicted RBP9.46□□□□□ -0.9
LINC00643-207ENST00000637212 DNAJC30Q96LL9 226 aa9.46□□□□□ -0.9
LINC00643-207ENST00000637212 HHLA3Q9XRX5 114 aa9.46□□□□□ -0.9
LINC00643-207ENST00000637212 TRBV6-5A0A0K0K1A5 114 aa9.45□□□□□ -0.9
LINC00643-207ENST00000637212 PRSS47A8MTI9 375 aa9.45□□□□□ -0.9
LINC00643-207ENST00000637212 NRACQ8N912 160 aa9.45□□□□□ -0.9
LINC00643-207ENST00000637212 C20orf78Q9BR46 151 aa9.45□□□□□ -0.9
LINC00643-207ENST00000637212 NIT2Q9NQR4 276 aa9.45□□□□□ -0.9
LINC00643-207ENST00000637212 PRO0255Q9UI72 69 aa9.45□□□□□ -0.9
LINC00643-207ENST00000637212 TRAV26-2A0A0B4J265 109 aa9.44□□□□□ -0.9
LINC00643-207ENST00000637212 TNFRSF6BO95407 300 aa9.44□□□□□ -0.9
LINC00643-207ENST00000637212 SRIP30626 198 aa9.44□□□□□ -0.9
LINC00643-207ENST00000637212 SLC25A29Q8N8R3 303 aa9.44□□□□□ -0.9
LINC00643-207ENST00000637212 PRADC1Q9BSG0 188 aa9.44□□□□□ -0.9
LINC00643-207ENST00000637212 SMKR1H3BMG3 65 aa9.43□□□□□ -0.9
LINC00643-207ENST00000637212 K7EQD1 137 aa9.43□□□□□ -0.9
LINC00643-207ENST00000637212 GAS8-AS1O95177 125 aa9.43□□□□□ -0.9
LINC00643-207ENST00000637212 HOXA5P20719 270 aa9.43□□□□□ -0.9
LINC00643-207ENST00000637212 CRYBA4P53673 196 aa9.43□□□□□ -0.9
LINC00643-207ENST00000637212 RAB5BP61020 215 aa9.43□□□□□ -0.9
LINC00643-207ENST00000637212 Q0VG73 95 aa9.43□□□□□ -0.9
LINC00643-207ENST00000637212 RHOHQ15669 191 aa9.43□□□□□ -0.9
LINC00643-207ENST00000637212 OR10J3Q5JRS4 329 aa9.43□□□□□ -0.9
LINC00643-207ENST00000637212 F5H768 121 aa9.42□□□□□ -0.9
LINC00643-207ENST00000637212 NCR2O95944 276 aa9.42□□□□□ -0.9
LINC00643-207ENST00000637212 NANOS2P60321 138 aaKnown RBP9.42□□□□□ -0.9
LINC00643-207ENST00000637212 RPL32P62910 135 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms