RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 DOPEY2Q9Y3R5 2298 aa11.81□□□□□ -0.52
CACNA1A-235ENST00000637004 IGLV4-69A0A075B6H9 119 aa11.81□□□□□ -0.52
CACNA1A-235ENST00000637004 DUSP14O95147 198 aaKnown RBP11.81□□□□□ -0.52
CACNA1A-235ENST00000637004 MED14OSP0DP75 135 aa11.81□□□□□ -0.52
CACNA1A-235ENST00000637004 ECSCRQ19T08 205 aa11.81□□□□□ -0.52
CACNA1A-235ENST00000637004 TIMD4Q96H15 378 aa11.81□□□□□ -0.52
CACNA1A-235ENST00000637004 LINC00477Q96M19 166 aa11.81□□□□□ -0.52
CACNA1A-235ENST00000637004 AKAP6Q13023 2319 aa11.8□□□□□ -0.52
CACNA1A-235ENST00000637004 WNK2Q9Y3S1 2297 aa11.8□□□□□ -0.52
CACNA1A-235ENST00000637004 IGHV3-49A0A0A0MS15 119 aa11.8□□□□□ -0.52
CACNA1A-235ENST00000637004 MINOS1Q5TGZ0 78 aa11.8□□□□□ -0.52
CACNA1A-235ENST00000637004 KIR2DL4Q99706 377 aa11.8□□□□□ -0.52
CACNA1A-235ENST00000637004 MINOS1-NBL1R4GNA1 71 aa11.8□□□□□ -0.52
CACNA1A-235ENST00000637004 SLC25A20O43772 301 aa11.8□□□□□ -0.52
CACNA1A-235ENST00000637004 C9orf139Q6ZV77 190 aa11.8□□□□□ -0.52
CACNA1A-235ENST00000637004 Q8N9W7 124 aa11.8□□□□□ -0.52
CACNA1A-235ENST00000637004 EEF1AKMT3Q96AZ1 226 aa11.8□□□□□ -0.52
CACNA1A-235ENST00000637004 RAX2Q96IS3 184 aa11.8□□□□□ -0.52
CACNA1A-235ENST00000637004 SRD5A1P18405 259 aa11.79□□□□□ -0.52
CACNA1A-235ENST00000637004 TMEM141Q96I45 108 aa11.79□□□□□ -0.52
CACNA1A-235ENST00000637004 CCDC140Q96MF4 163 aa11.79□□□□□ -0.52
CACNA1A-235ENST00000637004 U3KQE9 123 aa11.79□□□□□ -0.52
CACNA1A-235ENST00000637004 CELSR2Q9HCU4 2923 aa11.78□□□□□ -0.52
CACNA1A-235ENST00000637004 TGFAP01135 160 aa11.78□□□□□ -0.52
CACNA1A-235ENST00000637004 TP53TG1Q9Y2A0 90 aa11.78□□□□□ -0.52
CACNA1A-235ENST00000637004 LRBAP50851 2863 aa11.78□□□□□ -0.52
CACNA1A-235ENST00000637004 TRBV7-1A0A0A6YYK4 115 aa11.78□□□□□ -0.52
CACNA1A-235ENST00000637004 IGIPA6NJ69 53 aa11.78□□□□□ -0.52
CACNA1A-235ENST00000637004 Q6ZS46 218 aa11.78□□□□□ -0.52
CACNA1A-235ENST00000637004 GPHB5Q86YW7 130 aa11.78□□□□□ -0.52
CACNA1A-235ENST00000637004 ZFAND2AQ8N6M9 145 aa11.78□□□□□ -0.52
CACNA1A-235ENST00000637004 CSMD2Q7Z408 3487 aa11.78□□□□□ -0.52
CACNA1A-235ENST00000637004 TSHBP01222 138 aa11.78□□□□□ -0.52
CACNA1A-235ENST00000637004 GAGE2BQ13066 116 aa11.78□□□□□ -0.52
CACNA1A-235ENST00000637004 GAGE2EQ4V326 116 aa11.78□□□□□ -0.52
CACNA1A-235ENST00000637004 TMEM170BQ5T4T1 132 aa11.78□□□□□ -0.52
CACNA1A-235ENST00000637004 OR10J6PQ8NGY7 276 aa11.78□□□□□ -0.52
CACNA1A-235ENST00000637004 GAGE2DQ9UEU5 116 aa11.78□□□□□ -0.52
CACNA1A-235ENST00000637004 C9JAW5 83 aa11.77□□□□□ -0.53
CACNA1A-235ENST00000637004 RHODO00212 210 aa11.77□□□□□ -0.53
CACNA1A-235ENST00000637004 SNCGO76070 127 aa11.77□□□□□ -0.53
CACNA1A-235ENST00000637004 EMP1P54849 157 aa11.77□□□□□ -0.53
CACNA1A-235ENST00000637004 NOTCH2Q04721 2471 aa11.77□□□□□ -0.53
CACNA1A-235ENST00000637004 CSMD1Q96PZ7 3565 aa11.77□□□□□ -0.53
CACNA1A-235ENST00000637004 SPRY2O43597 315 aa11.77□□□□□ -0.53
CACNA1A-235ENST00000637004 TIMM17AQ99595 171 aa11.77□□□□□ -0.53
CACNA1A-235ENST00000637004 IGF1P05019 195 aa11.76□□□□□ -0.53
CACNA1A-235ENST00000637004 LGALS3P17931 250 aaKnown RBP11.76□□□□□ -0.53
CACNA1A-235ENST00000637004 ANXA2RQ3ZCQ2 193 aa11.76□□□□□ -0.53
CACNA1A-235ENST00000637004 POM121L12Q8N7R1 296 aa11.76□□□□□ -0.53
CACNA1A-235ENST00000637004 ITLN2Q8WWU7 325 aaPredicted RBP11.76□□□□□ -0.53
CACNA1A-235ENST00000637004 AJUBAQ96IF1 538 aa11.76□□□□□ -0.53
CACNA1A-235ENST00000637004 IGHV4OR15-8A0A075B7B6 117 aa11.76□□□□□ -0.53
CACNA1A-235ENST00000637004 A0A087WW49 117 aa11.76□□□□□ -0.53
CACNA1A-235ENST00000637004 J3QQQ9 107 aa11.76□□□□□ -0.53
CACNA1A-235ENST00000637004 OVOL1O14753 267 aa11.76□□□□□ -0.53
CACNA1A-235ENST00000637004 ATP6V0E1O15342 81 aa11.76□□□□□ -0.53
CACNA1A-235ENST00000637004 DOPEY1Q5JWR5 2465 aa11.76□□□□□ -0.53
CACNA1A-235ENST00000637004 NBPF19A0A087WUL8 3843 aa11.75□□□□□ -0.53
CACNA1A-235ENST00000637004 TSPEAR-AS2P59090 65 aa11.75□□□□□ -0.53
CACNA1A-235ENST00000637004 ABCA4P78363 2273 aa11.75□□□□□ -0.53
CACNA1A-235ENST00000637004 SPG11Q96JI7 2443 aa11.75□□□□□ -0.53
CACNA1A-235ENST00000637004 FAM90A27PA6NNH2 459 aa11.75□□□□□ -0.53
CACNA1A-235ENST00000637004 VCYO14598 125 aa11.74□□□□□ -0.53
CACNA1A-235ENST00000637004 P0DMU3 169 aa11.74□□□□□ -0.53
CACNA1A-235ENST00000637004 FAM231AP0DMU4 169 aa11.74□□□□□ -0.53
CACNA1A-235ENST00000637004 FAM231CP0DMU5 169 aa11.74□□□□□ -0.53
CACNA1A-235ENST00000637004 C20orf173Q96LM9 149 aa11.74□□□□□ -0.53
CACNA1A-235ENST00000637004 A4D1N5 150 aa11.74□□□□□ -0.53
CACNA1A-235ENST00000637004 CCL21O00585 134 aa11.74□□□□□ -0.53
CACNA1A-235ENST00000637004 IGHV3-33P01772 117 aa11.74□□□□□ -0.53
CACNA1A-235ENST00000637004 PTPN13Q12923 2485 aa11.74□□□□□ -0.53
CACNA1A-235ENST00000637004 A0A0B4J2C4 111 aa11.73□□□□□ -0.53
CACNA1A-235ENST00000637004 ZNF876PQ49A33 203 aa11.73□□□□□ -0.53
CACNA1A-235ENST00000637004 AMELXQ99217 191 aa11.73□□□□□ -0.53
CACNA1A-235ENST00000637004 NHLRC4P0CG21 123 aaPredicted RBP11.73□□□□□ -0.53
CACNA1A-235ENST00000637004 NDUFV3P56181 108 aaKnown RBP11.73□□□□□ -0.53
CACNA1A-235ENST00000637004 CDSNQ15517 529 aa11.73□□□□□ -0.53
CACNA1A-235ENST00000637004 ABCA12Q86UK0 2595 aa11.73□□□□□ -0.53
CACNA1A-235ENST00000637004 LY6HO94772 140 aa11.73□□□□□ -0.53
CACNA1A-235ENST00000637004 POLR2KP53803 58 aaKnown RBP11.73□□□□□ -0.53
CACNA1A-235ENST00000637004 POLQO75417 2590 aa11.72□□□□□ -0.53
CACNA1A-235ENST00000637004 NXPH4O95158 308 aa11.72□□□□□ -0.53
CACNA1A-235ENST00000637004 RNASE3P12724 160 aaKnown RBP11.72□□□□□ -0.53
CACNA1A-235ENST00000637004 ATXN8Q156A1 80 aa11.72□□□□□ -0.53
CACNA1A-235ENST00000637004 TTC32Q5I0X7 151 aa11.72□□□□□ -0.53
CACNA1A-235ENST00000637004 G3V318 75 aa11.72□□□□□ -0.53
CACNA1A-235ENST00000637004 RNASE4P34096 147 aaKnown RBP11.72□□□□□ -0.53
CACNA1A-235ENST00000637004 Q6Q795 121 aa11.72□□□□□ -0.53
CACNA1A-235ENST00000637004 TRPT1Q86TN4 253 aaKnown RBP11.72□□□□□ -0.53
CACNA1A-235ENST00000637004 ZNRF2Q8NHG8 242 aa11.72□□□□□ -0.53
CACNA1A-235ENST00000637004 LINC01560Q8TB33 94 aa11.72□□□□□ -0.53
CACNA1A-235ENST00000637004 TMEM263Q8WUH6 116 aaKnown RBP11.72□□□□□ -0.53
CACNA1A-235ENST00000637004 ARHGAP32A7KAX9 2087 aa11.71□□□□□ -0.53
CACNA1A-235ENST00000637004 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.71□□□□□ -0.53
CACNA1A-235ENST00000637004 GAGE12JA6NER3 117 aa11.71□□□□□ -0.53
CACNA1A-235ENST00000637004 GNRH2O43555 120 aa11.71□□□□□ -0.53
CACNA1A-235ENST00000637004 GAGE7O76087 117 aa11.71□□□□□ -0.53
CACNA1A-235ENST00000637004 GAGE12FP0CL80 117 aa11.71□□□□□ -0.53
CACNA1A-235ENST00000637004 GAGE12GP0CL81 117 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms