RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 PHLDA1Q8WV24 401 aaPredicted RBP8.78□□□□□ -1
CLN6-217ENST00000636964 TTTY13Q9BZ97 58 aa8.78□□□□□ -1
CLN6-217ENST00000636964 APOMO95445 188 aa8.77□□□□□ -1
CLN6-217ENST00000636964 IGLV1-40P01703 118 aa8.77□□□□□ -1
CLN6-217ENST00000636964 PDE6HQ13956 83 aa8.77□□□□□ -1
CLN6-217ENST00000636964 RPL35AP18077 110 aaKnown RBP8.77□□□□□ -1.01
CLN6-217ENST00000636964 CSN1S1P47710 185 aa8.77□□□□□ -1.01
CLN6-217ENST00000636964 C8orf49Q96NF6 230 aa8.77□□□□□ -1.01
CLN6-217ENST00000636964 IGHG4P01861 327 aa8.77□□□□□ -1.01
CLN6-217ENST00000636964 OR8A1Q8NGG7 326 aa8.77□□□□□ -1.01
CLN6-217ENST00000636964 USMG5Q96IX5 58 aa8.77□□□□□ -1.01
CLN6-217ENST00000636964 KIR2DL4Q99706 377 aa8.77□□□□□ -1.01
CLN6-217ENST00000636964 NPIPB6E9PJ23 425 aa8.76□□□□□ -1.01
CLN6-217ENST00000636964 CHEK1O14757 476 aa8.76□□□□□ -1.01
CLN6-217ENST00000636964 P01737 135 aa8.76□□□□□ -1.01
CLN6-217ENST00000636964 IFI27P40305 119 aaPredicted RBP8.76□□□□□ -1.01
CLN6-217ENST00000636964 Q8TAT8 98 aa8.76□□□□□ -1.01
CLN6-217ENST00000636964 AP5S1Q9NUS5 200 aa8.76□□□□□ -1.01
CLN6-217ENST00000636964 UNC79Q9P2D8 2635 aa8.76□□□□□ -1.01
CLN6-217ENST00000636964 HAX1O00165 279 aa8.76□□□□□ -1.01
CLN6-217ENST00000636964 ARMS2P0C7Q2 107 aa8.76□□□□□ -1.01
CLN6-217ENST00000636964 CFHR3Q02985 330 aa8.76□□□□□ -1.01
CLN6-217ENST00000636964 IGKV3-7A0A075B6H7 116 aa8.75□□□□□ -1.01
CLN6-217ENST00000636964 PRAC2D3DTV9 90 aa8.75□□□□□ -1.01
CLN6-217ENST00000636964 TIRAPP58753 221 aa8.75□□□□□ -1.01
CLN6-217ENST00000636964 CACNG7P62955 275 aa8.75□□□□□ -1.01
CLN6-217ENST00000636964 CT83Q5H943 113 aa8.75□□□□□ -1.01
CLN6-217ENST00000636964 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.75□□□□□ -1.01
CLN6-217ENST00000636964 TMEM75Q8N9X5 138 aa8.75□□□□□ -1.01
CLN6-217ENST00000636964 IGKV2D-26A0A0A0MRZ7 120 aa8.75□□□□□ -1.01
CLN6-217ENST00000636964 A0A1B0GWB2 263 aa8.75□□□□□ -1.01
CLN6-217ENST00000636964 HRCT1Q6UXD1 115 aa8.75□□□□□ -1.01
CLN6-217ENST00000636964 H3BUA1 57 aa8.75□□□□□ -1.01
CLN6-217ENST00000636964 ERCC8Q13216 396 aa8.75□□□□□ -1.01
CLN6-217ENST00000636964 RHODO00212 210 aa8.74□□□□□ -1.01
CLN6-217ENST00000636964 CRIP1P50238 77 aa8.74□□□□□ -1.01
CLN6-217ENST00000636964 PRELID3AQ96N28 172 aa8.74□□□□□ -1.01
CLN6-217ENST00000636964 PRADC1Q9BSG0 188 aa8.74□□□□□ -1.01
CLN6-217ENST00000636964 ZNF492Q9P255 531 aa8.74□□□□□ -1.01
CLN6-217ENST00000636964 PSMB8P28062 276 aa8.74□□□□□ -1.01
CLN6-217ENST00000636964 C9orf139Q6ZV77 190 aa8.74□□□□□ -1.01
CLN6-217ENST00000636964 GFRA4Q9GZZ7 299 aa8.74□□□□□ -1.01
CLN6-217ENST00000636964 RPL11P62913 178 aaKnown RBP8.74□□□□□ -1.01
CLN6-217ENST00000636964 DKK2Q9UBU2 259 aa8.74□□□□□ -1.01
CLN6-217ENST00000636964 U3KQE9 123 aa8.74□□□□□ -1.01
CLN6-217ENST00000636964 C2CD3Q4AC94 2353 aa8.73□□□□□ -1.01
CLN6-217ENST00000636964 NDUFA4O00483 81 aa8.73□□□□□ -1.01
CLN6-217ENST00000636964 NMUP48645 174 aa8.73□□□□□ -1.01
CLN6-217ENST00000636964 FOXI1Q12951 378 aa8.73□□□□□ -1.01
CLN6-217ENST00000636964 LGALS9BQ3B8N2 356 aa8.73□□□□□ -1.01
CLN6-217ENST00000636964 LGALS9CQ6DKI2 356 aa8.73□□□□□ -1.01
CLN6-217ENST00000636964 HIST2H2BDQ6DRA6 164 aa8.73□□□□□ -1.01
CLN6-217ENST00000636964 ZNF702PQ9H963 129 aa8.73□□□□□ -1.01
CLN6-217ENST00000636964 SIGLEC8Q9NYZ4 499 aa8.73□□□□□ -1.01
CLN6-217ENST00000636964 TMSB15BA0A087X1C1 80 aa8.72□□□□□ -1.01
CLN6-217ENST00000636964 LOC389332A0A1B0GUA5 103 aa8.72□□□□□ -1.01
CLN6-217ENST00000636964 FN1P02751 2386 aaKnown RBP8.72□□□□□ -1.01
CLN6-217ENST00000636964 TRAV8-2A0A0B4J237 113 aa8.72□□□□□ -1.01
CLN6-217ENST00000636964 SRD5A1P18405 259 aa8.72□□□□□ -1.01
CLN6-217ENST00000636964 WFDC3Q8IUB2 231 aa8.72□□□□□ -1.01
CLN6-217ENST00000636964 IGLC6P0CF74 106 aa8.72□□□□□ -1.01
CLN6-217ENST00000636964 GAGE13Q4V321 117 aa8.72□□□□□ -1.01
CLN6-217ENST00000636964 H3BMG7 143 aa8.71□□□□□ -1.01
CLN6-217ENST00000636964 SMIM13P0DJ93 91 aa8.71□□□□□ -1.01
CLN6-217ENST00000636964 GCSHP23434 173 aa8.71□□□□□ -1.01
CLN6-217ENST00000636964 C16orf92Q96LL3 132 aa8.71□□□□□ -1.01
CLN6-217ENST00000636964 PRR25Q96S07 402 aa8.71□□□□□ -1.01
CLN6-217ENST00000636964 TRBV6-1A0A0K0K1D8 114 aa8.71□□□□□ -1.02
CLN6-217ENST00000636964 ATP5LO75964 103 aa8.71□□□□□ -1.02
CLN6-217ENST00000636964 DEFB1P60022 68 aa8.71□□□□□ -1.02
CLN6-217ENST00000636964 C4orf26Q17RF5 130 aa8.71□□□□□ -1.02
CLN6-217ENST00000636964 GATD1Q8NB37 220 aa8.71□□□□□ -1.02
CLN6-217ENST00000636964 PRSS3P2Q8NHM4 247 aa8.71□□□□□ -1.02
CLN6-217ENST00000636964 PRO0461Q9UI25 63 aa8.71□□□□□ -1.02
CLN6-217ENST00000636964 SNCGO76070 127 aa8.7□□□□□ -1.02
CLN6-217ENST00000636964 ZNF80P51504 273 aaPredicted RBP8.7□□□□□ -1.02
CLN6-217ENST00000636964 FHL3Q13643 280 aa8.7□□□□□ -1.02
CLN6-217ENST00000636964 TMEM190Q8WZ59 177 aa8.7□□□□□ -1.02
CLN6-217ENST00000636964 RHPN1-AS1Q9BWJ2 59 aa8.7□□□□□ -1.02
CLN6-217ENST00000636964 AMTNQ6UX39 209 aa8.7□□□□□ -1.02
CLN6-217ENST00000636964 SLC50A1Q9BRV3 221 aa8.7□□□□□ -1.02
CLN6-217ENST00000636964 NIPBLQ6KC79 2804 aaeCLIP8.69□□□□□ -1.02
CLN6-217ENST00000636964 A0A1B0GUT8 65 aa8.69□□□□□ -1.02
CLN6-217ENST00000636964 D6R8Y8 96 aa8.69□□□□□ -1.02
CLN6-217ENST00000636964 E9PLD3 99 aa8.69□□□□□ -1.02
CLN6-217ENST00000636964 C20orf173Q96LM9 149 aa8.69□□□□□ -1.02
CLN6-217ENST00000636964 PRO0628Q9UI54 55 aa8.69□□□□□ -1.02
CLN6-217ENST00000636964 AGRNO00468 2067 aa8.69□□□□□ -1.02
CLN6-217ENST00000636964 SH2D1AO60880 128 aa8.69□□□□□ -1.02
CLN6-217ENST00000636964 C18orf65Q6ZTR6 163 aa8.69□□□□□ -1.02
CLN6-217ENST00000636964 GPHB5Q86YW7 130 aa8.69□□□□□ -1.02
CLN6-217ENST00000636964 AGPAT4-IT1Q9H0P7 198 aa8.69□□□□□ -1.02
CLN6-217ENST00000636964 HHLA3Q9XRX5 114 aa8.69□□□□□ -1.02
CLN6-217ENST00000636964 DAZ1Q9NQZ3 744 aaKnown RBP8.69□□□□□ -1.02
CLN6-217ENST00000636964 IGHV7-4-1A0A0J9YVY3 117 aa8.68□□□□□ -1.02
CLN6-217ENST00000636964 ZNF561-AS1K7EIQ3 104 aa8.68□□□□□ -1.02
CLN6-217ENST00000636964 NHP2Q9NX24 153 aaKnown RBP8.68□□□□□ -1.02
CLN6-217ENST00000636964 IGLL5B9A064 214 aa8.68□□□□□ -1.02
CLN6-217ENST00000636964 KRTAP1-1Q07627 177 aa8.68□□□□□ -1.02
CLN6-217ENST00000636964 CHAC1Q9BUX1 264 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms