RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 SOCS3O14543 225 aa10.54□□□□□ -0.72
CACNA1A-228ENST00000636610 PLNP26678 52 aa10.54□□□□□ -0.72
CACNA1A-228ENST00000636610 OVOL1O14753 267 aa10.53□□□□□ -0.72
CACNA1A-228ENST00000636610 ORMDL2Q53FV1 153 aa10.53□□□□□ -0.72
CACNA1A-228ENST00000636610 CHD6Q8TD26 2715 aa10.53□□□□□ -0.72
CACNA1A-228ENST00000636610 PIMREGQ9BSJ6 248 aa10.53□□□□□ -0.72
CACNA1A-228ENST00000636610 MDFICQ9P1T7 246 aa10.53□□□□□ -0.72
CACNA1A-228ENST00000636610 HIGD1BQ9P298 99 aa10.53□□□□□ -0.72
CACNA1A-228ENST00000636610 NEXN-AS1Q8NBZ9 246 aa10.53□□□□□ -0.72
CACNA1A-228ENST00000636610 MRPL53Q96EL3 112 aaKnown RBP10.53□□□□□ -0.72
CACNA1A-228ENST00000636610 GTSF1LQ9H1H1 148 aa10.53□□□□□ -0.72
CACNA1A-228ENST00000636610 MYMXA0A1B0GTQ4 84 aa10.52□□□□□ -0.72
CACNA1A-228ENST00000636610 RNF223E7ERA6 249 aa10.52□□□□□ -0.72
CACNA1A-228ENST00000636610 IGHV4-59P01825 116 aa10.52□□□□□ -0.72
CACNA1A-228ENST00000636610 TMEM170BQ5T4T1 132 aa10.52□□□□□ -0.72
CACNA1A-228ENST00000636610 OR5A1Q8NGJ0 315 aa10.52□□□□□ -0.72
CACNA1A-228ENST00000636610 TOMM6Q96B49 74 aa10.52□□□□□ -0.72
CACNA1A-228ENST00000636610 DAZ1Q9NQZ3 744 aaKnown RBP10.52□□□□□ -0.72
CACNA1A-228ENST00000636610 PRRC2AP48634 2157 aaKnown RBP10.52□□□□□ -0.73
CACNA1A-228ENST00000636610 LOC107984156A0A0G2JMH3 177 aa10.52□□□□□ -0.73
CACNA1A-228ENST00000636610 LGALS1P09382 135 aaKnown RBP10.52□□□□□ -0.73
CACNA1A-228ENST00000636610 INSL3P51460 131 aa10.52□□□□□ -0.73
CACNA1A-228ENST00000636610 SPINK13Q1W4C9 94 aa10.52□□□□□ -0.73
CACNA1A-228ENST00000636610 ARL17AQ8IVW1 177 aa10.52□□□□□ -0.73
CACNA1A-228ENST00000636610 TM2D2Q9BX73 214 aa10.52□□□□□ -0.73
CACNA1A-228ENST00000636610 IGHV4-4A0A075B6R2 117 aa10.52□□□□□ -0.73
CACNA1A-228ENST00000636610 C19orf54Q5BKX5 351 aa10.52□□□□□ -0.73
CACNA1A-228ENST00000636610 CLEC2AQ6UVW9 174 aa10.52□□□□□ -0.73
CACNA1A-228ENST00000636610 C11orf86A6NJI1 115 aa10.51□□□□□ -0.73
CACNA1A-228ENST00000636610 SUMO4Q6EEV6 95 aa10.51□□□□□ -0.73
CACNA1A-228ENST00000636610 PGPEP1Q9NXJ5 209 aa10.51□□□□□ -0.73
CACNA1A-228ENST00000636610 IGHG2P01859 326 aa10.51□□□□□ -0.73
CACNA1A-228ENST00000636610 ZNF56Q15929 161 aa10.51□□□□□ -0.73
CACNA1A-228ENST00000636610 MRPL16Q9NX20 251 aaKnown RBP10.5□□□□□ -0.73
CACNA1A-228ENST00000636610 SYNJ2BPP57105 145 aa10.5□□□□□ -0.73
CACNA1A-228ENST00000636610 SDHAF1A6NFY7 115 aa10.5□□□□□ -0.73
CACNA1A-228ENST00000636610 TSHBP01222 138 aa10.5□□□□□ -0.73
CACNA1A-228ENST00000636610 MTORP42345 2549 aa10.49□□□□□ -0.73
CACNA1A-228ENST00000636610 LINC01549A6NIU2 74 aa10.49□□□□□ -0.73
CACNA1A-228ENST00000636610 SMAGPQ0VAQ4 97 aa10.49□□□□□ -0.73
CACNA1A-228ENST00000636610 FOXI2Q6ZQN5 318 aa10.49□□□□□ -0.73
CACNA1A-228ENST00000636610 H7C2G1 150 aa10.49□□□□□ -0.73
CACNA1A-228ENST00000636610 CRYGDP07320 174 aa10.49□□□□□ -0.73
CACNA1A-228ENST00000636610 C10orf105Q8TEF2 133 aa10.49□□□□□ -0.73
CACNA1A-228ENST00000636610 ZNF418Q8TF45 676 aaPredicted RBP10.49□□□□□ -0.73
CACNA1A-228ENST00000636610 TRBV7-3A0A075B6L6 115 aa10.48□□□□□ -0.73
CACNA1A-228ENST00000636610 A6NDX4 124 aa10.48□□□□□ -0.73
CACNA1A-228ENST00000636610 E9PLD3 99 aa10.48□□□□□ -0.73
CACNA1A-228ENST00000636610 MSMBP08118 114 aa10.48□□□□□ -0.73
CACNA1A-228ENST00000636610 RNASE13Q5GAN3 156 aaKnown RBP10.48□□□□□ -0.73
CACNA1A-228ENST00000636610 ZFP2Q6ZN57 461 aa10.48□□□□□ -0.73
CACNA1A-228ENST00000636610 USMG5Q96IX5 58 aa10.48□□□□□ -0.73
CACNA1A-228ENST00000636610 C20orf78Q9BR46 151 aa10.48□□□□□ -0.73
CACNA1A-228ENST00000636610 TSSC4Q9Y5U2 329 aaPredicted RBP10.48□□□□□ -0.73
CACNA1A-228ENST00000636610 HOXA3O43365 443 aaPredicted RBP10.47□□□□□ -0.73
CACNA1A-228ENST00000636610 DEFB136Q30KP8 78 aa10.47□□□□□ -0.73
CACNA1A-228ENST00000636610 DUX3Q96PT4 197 aa10.47□□□□□ -0.73
CACNA1A-228ENST00000636610 ACANP16112 2415 aa10.47□□□□□ -0.73
CACNA1A-228ENST00000636610 KNCNA6PVL3 124 aa10.47□□□□□ -0.73
CACNA1A-228ENST00000636610 LINC00315P59091 139 aa10.47□□□□□ -0.73
CACNA1A-228ENST00000636610 DEFB112Q30KQ8 113 aa10.47□□□□□ -0.73
CACNA1A-228ENST00000636610 Q8N1Y9 231 aa10.47□□□□□ -0.73
CACNA1A-228ENST00000636610 LENEPQ9Y5L5 61 aa10.47□□□□□ -0.73
CACNA1A-228ENST00000636610 P0DMU3 169 aa10.47□□□□□ -0.73
CACNA1A-228ENST00000636610 FAM231AP0DMU4 169 aa10.47□□□□□ -0.73
CACNA1A-228ENST00000636610 FAM231CP0DMU5 169 aa10.47□□□□□ -0.73
CACNA1A-228ENST00000636610 TSPEAR-AS2P59090 65 aa10.47□□□□□ -0.73
CACNA1A-228ENST00000636610 PTH2Q96A98 100 aa10.47□□□□□ -0.73
CACNA1A-228ENST00000636610 A0A1B0GWB2 263 aa10.46□□□□□ -0.73
CACNA1A-228ENST00000636610 ADARB2-AS1A8MUL3 147 aa10.46□□□□□ -0.73
CACNA1A-228ENST00000636610 PSMB2P49721 201 aa10.46□□□□□ -0.73
CACNA1A-228ENST00000636610 RRN3P1Q2M238 152 aa10.46□□□□□ -0.73
CACNA1A-228ENST00000636610 DCANP1Q8TF63 244 aa10.46□□□□□ -0.73
CACNA1A-228ENST00000636610 KIR2DL4Q99706 377 aa10.46□□□□□ -0.73
CACNA1A-228ENST00000636610 TRAV12-1A0A0B4J245 112 aa10.46□□□□□ -0.74
CACNA1A-228ENST00000636610 KLK9Q2XQG4 91 aa10.46□□□□□ -0.74
CACNA1A-228ENST00000636610 ZNF580Q9UK33 172 aa10.46□□□□□ -0.74
CACNA1A-228ENST00000636610 PROK1P58294 105 aa10.45□□□□□ -0.74
CACNA1A-228ENST00000636610 GAGE13Q4V321 117 aa10.45□□□□□ -0.74
CACNA1A-228ENST00000636610 MORN3Q6PF18 240 aaPredicted RBP10.45□□□□□ -0.74
CACNA1A-228ENST00000636610 KIF25-AS1Q9Y6Z4 181 aa10.45□□□□□ -0.74
CACNA1A-228ENST00000636610 ID1P41134 155 aa10.44□□□□□ -0.74
CACNA1A-228ENST00000636610 CEMP1Q6PRD7 247 aaPredicted RBP10.44□□□□□ -0.74
CACNA1A-228ENST00000636610 ZNRF2Q8NHG8 242 aa10.44□□□□□ -0.74
CACNA1A-228ENST00000636610 Q9UF83 564 aa10.44□□□□□ -0.74
CACNA1A-228ENST00000636610 IGLV4-69A0A075B6H9 119 aa10.44□□□□□ -0.74
CACNA1A-228ENST00000636610 TMEM238C9JI98 176 aa10.44□□□□□ -0.74
CACNA1A-228ENST00000636610 ZNF876PQ49A33 203 aa10.44□□□□□ -0.74
CACNA1A-228ENST00000636610 C18orf65Q6ZTR6 163 aa10.44□□□□□ -0.74
CACNA1A-228ENST00000636610 FAM19A4Q96LR4 140 aa10.44□□□□□ -0.74
CACNA1A-228ENST00000636610 SPANXB1Q9NS25 103 aaPredicted RBP10.44□□□□□ -0.74
CACNA1A-228ENST00000636610 SPAG8Q99932 426 aaPredicted RBP10.43□□□□□ -0.74
CACNA1A-228ENST00000636610 KLLNB2CW77 178 aa10.43□□□□□ -0.74
CACNA1A-228ENST00000636610 IGLV1-40P01703 118 aa10.43□□□□□ -0.74
CACNA1A-228ENST00000636610 AZU1P20160 251 aa10.43□□□□□ -0.74
CACNA1A-228ENST00000636610 KHDC1LQ5JSQ8 128 aa10.43□□□□□ -0.74
CACNA1A-228ENST00000636610 RAX2Q96IS3 184 aa10.43□□□□□ -0.74
CACNA1A-228ENST00000636610 BEX4Q9NWD9 120 aaPredicted RBP10.42□□□□□ -0.74
CACNA1A-228ENST00000636610 CFAP161Q6P656 301 aa10.42□□□□□ -0.74
CACNA1A-228ENST00000636610 IGIPA6NJ69 53 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms