RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 Q6ZS92 163 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 Q6ZSA8 131 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 ARPINQ7Z6K5 226 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 ST6GALNAC3Q8NDV1 305 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 FDCSPQ8NFU4 85 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 OR5D14Q8NGL3 314 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 C4orf3Q8WVX3 66 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 PSMF1Q92530 271 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 CHCHD1Q96BP2 118 aaKnown RBP1.56□□□□□ -2.16
CLN5-212ENST00000636602 BORCS8Q96FH0 119 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 CCDC32Q9BV29 185 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 SAR1AQ9NR31 198 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 RASL12Q9NYN1 266 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 CALML5Q9NZT1 146 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 NUBP2Q9Y5Y2 271 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 ARFGEF3Q5TH69 2177 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 MED13Q9UHV7 2174 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 ANKRD11Q6UB99 2663 aaPredicted RBP1.56□□□□□ -2.16
CLN5-212ENST00000636602 MGAQ8IWI9 3026 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 URB1O60287 2271 aaKnown RBP1.55□□□□□ -2.16
CLN5-212ENST00000636602 ACACAQ13085 2346 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 TRAV5A0A0B4J249 113 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 A0A1W2PRE2 83 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 PRORSD1PA6NEY8 169 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 C5orf58C9J3I9 102 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 HMGN4O00479 90 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 RER1O15258 196 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 HIST1H2BKO60814 126 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 CST7O76096 145 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 IFNA4P05014 189 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 HIST1H2BJP06899 126 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 COX4I1P13073 169 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 CNBPP62633 177 aaKnown RBP1.55□□□□□ -2.16
CLN5-212ENST00000636602 HBBP68871 147 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 OR8J3Q8NGG0 315 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 OR5D16Q8NGK9 328 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 GRPEL2Q8TAA5 225 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 C10orf105Q8TEF2 133 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 POP5Q969H6 163 aaKnown RBP1.55□□□□□ -2.16
CLN5-212ENST00000636602 CARD19Q96LW7 228 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 SDF2Q99470 211 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 CGREF1Q99674 301 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 FAM107BQ9H098 131 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 TPT1P8Q9HAU6 139 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 BOKQ9UMX3 212 aaPredicted RBP1.55□□□□□ -2.16
CLN5-212ENST00000636602 CHCHD2Q9Y6H1 151 aaPredicted RBP1.55□□□□□ -2.16
CLN5-212ENST00000636602 AHCTF1Q8WYP5 2266 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 PTPRQQ9UMZ3 2332 aa1.55□□□□□ -2.16
CLN5-212ENST00000636602 CHD8Q9HCK8 2581 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 USP24Q9UPU5 2620 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 NINQ8N4C6 2090 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 FREM3P0C091 2139 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 APC2O95996 2303 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 IGF2RP11717 2491 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 MAP1BP46821 2468 aaKnown RBP1.54□□□□□ -2.16
CLN5-212ENST00000636602 NCOR2Q9Y618 2525 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 A0A087WX48 190 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 IGLV3-32A0A0A0MS00 114 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 B4DSR2 109 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 C17orf112F2Z3M2 114 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 M0R233 179 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 FXYD1O00168 92 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 DBIP07108 87 aaKnown RBP1.54□□□□□ -2.16
CLN5-212ENST00000636602 DSCR4P56555 118 aaPredicted RBP1.54□□□□□ -2.16
CLN5-212ENST00000636602 CDK6Q00534 326 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 PLGLB1Q02325 96 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 KLRD1Q13241 179 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 C2orf82Q6UX34 121 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 LZICQ8WZA0 190 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 ISOC1Q96CN7 298 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 RMND5BQ96G75 393 aaPredicted RBP1.54□□□□□ -2.16
CLN5-212ENST00000636602 OR2H1Q9GZK4 316 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 OTORQ9NRC9 128 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 DSPPQ9NZW4 1301 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 KALRNO60229 2985 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 RELNP78509 3460 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 SPTBN2O15020 2390 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 PKD1L2Q7Z442 2459 aa1.54□□□□□ -2.16
CLN5-212ENST00000636602 IGSF10Q6WRI0 2623 aa1.53□□□□□ -2.16
CLN5-212ENST00000636602 IGKV2D-26A0A0A0MRZ7 120 aa1.53□□□□□ -2.16
CLN5-212ENST00000636602 ZNF736B4DX44 427 aaPredicted RBP1.53□□□□□ -2.16
CLN5-212ENST00000636602 ACACBO00763 2458 aa1.53□□□□□ -2.16
CLN5-212ENST00000636602 IGF2P01344 180 aa1.53□□□□□ -2.16
CLN5-212ENST00000636602 RAB5CP51148 216 aa1.53□□□□□ -2.16
CLN5-212ENST00000636602 COPZ1P61923 177 aa1.53□□□□□ -2.16
CLN5-212ENST00000636602 SELENOWP63302 87 aa1.53□□□□□ -2.16
CLN5-212ENST00000636602 KRTAP21-3Q3LHN1 58 aa1.53□□□□□ -2.16
CLN5-212ENST00000636602 C1orf134Q5TEV5 83 aa1.53□□□□□ -2.16
CLN5-212ENST00000636602 PRR15Q8IV56 129 aa1.53□□□□□ -2.16
CLN5-212ENST00000636602 DEFB107AQ8IZN7 70 aa1.53□□□□□ -2.16
CLN5-212ENST00000636602 C10orf111Q8N326 155 aa1.53□□□□□ -2.16
CLN5-212ENST00000636602 TP53RKQ96S44 253 aa1.53□□□□□ -2.16
CLN5-212ENST00000636602 DIDO1Q9BTC0 2240 aaKnown RBP1.53□□□□□ -2.16
CLN5-212ENST00000636602 PROK2Q9HC23 129 aa1.53□□□□□ -2.16
CLN5-212ENST00000636602 NAT8BQ9UHF3 227 aa1.53□□□□□ -2.16
CLN5-212ENST00000636602 PRRC2CQ9Y520 2896 aaKnown RBP1.53□□□□□ -2.16
CLN5-212ENST00000636602 COL6A6A6NMZ7 2263 aa1.52□□□□□ -2.17
CLN5-212ENST00000636602 NCOA6Q14686 2063 aaPredicted RBP1.52□□□□□ -2.17
CLN5-212ENST00000636602 UBR5O95071 2799 aaPredicted RBP1.52□□□□□ -2.17
CLN5-212ENST00000636602 PIEZO2Q9H5I5 2752 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms