RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 KLHL30-AS1Q8NEE0 82 aa11.67□□□□□ -0.54
CLN8-209ENST00000635970 FAM110DQ8TAY7 271 aaPredicted RBP11.67□□□□□ -0.54
CLN8-209ENST00000635970 WNK1Q9H4A3 2382 aa11.67□□□□□ -0.54
CLN8-209ENST00000635970 BUB3O43684 328 aa11.67□□□□□ -0.54
CLN8-209ENST00000635970 RPL24P83731 157 aaKnown RBP11.67□□□□□ -0.54
CLN8-209ENST00000635970 DEFB136Q30KP8 78 aa11.67□□□□□ -0.54
CLN8-209ENST00000635970 NHP2Q9NX24 153 aaKnown RBP11.67□□□□□ -0.54
CLN8-209ENST00000635970 IGLL5B9A064 214 aa11.66□□□□□ -0.54
CLN8-209ENST00000635970 TRGV3P03979 118 aa11.66□□□□□ -0.54
CLN8-209ENST00000635970 SAMD13Q5VXD3 122 aa11.66□□□□□ -0.54
CLN8-209ENST00000635970 MRAP2Q96G30 205 aa11.66□□□□□ -0.54
CLN8-209ENST00000635970 DUX3Q96PT4 197 aa11.66□□□□□ -0.54
CLN8-209ENST00000635970 TEX48A0A1B0GUV7 120 aa11.65□□□□□ -0.54
CLN8-209ENST00000635970 PRB4P10163 310 aaPredicted RBP11.65□□□□□ -0.54
CLN8-209ENST00000635970 NRACQ8N912 160 aa11.65□□□□□ -0.54
CLN8-209ENST00000635970 SIGMAR1Q99720 223 aa11.65□□□□□ -0.54
CLN8-209ENST00000635970 IGKV3D-20A0A0C4DH25 116 aa11.65□□□□□ -0.55
CLN8-209ENST00000635970 IGHV3-11P01762 117 aa11.65□□□□□ -0.55
CLN8-209ENST00000635970 CD300EQ496F6 205 aaPredicted RBP11.65□□□□□ -0.55
CLN8-209ENST00000635970 TM4SF20Q53R12 229 aa11.65□□□□□ -0.55
CLN8-209ENST00000635970 TMEM78Q5T7P6 136 aa11.65□□□□□ -0.55
CLN8-209ENST00000635970 ZNF479Q96JC4 524 aa11.65□□□□□ -0.55
CLN8-209ENST00000635970 MRPL35Q9NZE8 188 aaKnown RBP11.65□□□□□ -0.55
CLN8-209ENST00000635970 H7C1H1 209 aa11.64□□□□□ -0.55
CLN8-209ENST00000635970 HLA-DMBP28068 263 aa11.64□□□□□ -0.55
CLN8-209ENST00000635970 ZNF502Q8TBZ5 544 aa11.64□□□□□ -0.55
CLN8-209ENST00000635970 LENEPQ9Y5L5 61 aa11.64□□□□□ -0.55
CLN8-209ENST00000635970 A0A1B0GWB2 263 aa11.63□□□□□ -0.55
CLN8-209ENST00000635970 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.63□□□□□ -0.55
CLN8-209ENST00000635970 H3BUA1 57 aa11.63□□□□□ -0.55
CLN8-209ENST00000635970 GAS8-AS1O95177 125 aa11.63□□□□□ -0.55
CLN8-209ENST00000635970 ERCC8Q13216 396 aa11.63□□□□□ -0.55
CLN8-209ENST00000635970 C12orf74Q32Q52 190 aa11.63□□□□□ -0.55
CLN8-209ENST00000635970 ORMDL2Q53FV1 153 aa11.63□□□□□ -0.55
CLN8-209ENST00000635970 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.63□□□□□ -0.55
CLN8-209ENST00000635970 C9orf47Q6ZRZ4 202 aa11.63□□□□□ -0.55
CLN8-209ENST00000635970 UBE2E2Q96LR5 201 aa11.63□□□□□ -0.55
CLN8-209ENST00000635970 ZFAND3Q9H8U3 227 aa11.63□□□□□ -0.55
CLN8-209ENST00000635970 F8VRH5 84 aa11.63□□□□□ -0.55
CLN8-209ENST00000635970 C4orf3Q8WVX3 66 aa11.63□□□□□ -0.55
CLN8-209ENST00000635970 IGHV7-4-1A0A0J9YVY3 117 aa11.62□□□□□ -0.55
CLN8-209ENST00000635970 IGHV3-23P01764 117 aa11.62□□□□□ -0.55
CLN8-209ENST00000635970 RAX2Q96IS3 184 aa11.62□□□□□ -0.55
CLN8-209ENST00000635970 ATP6V0BQ99437 205 aa11.62□□□□□ -0.55
CLN8-209ENST00000635970 AGPAT4-IT1Q9H0P7 198 aa11.62□□□□□ -0.55
CLN8-209ENST00000635970 SPANXB1Q9NS25 103 aaPredicted RBP11.62□□□□□ -0.55
CLN8-209ENST00000635970 GATA1P15976 413 aaPredicted RBP11.61□□□□□ -0.55
CLN8-209ENST00000635970 IGFL4Q6B9Z1 124 aa11.61□□□□□ -0.55
CLN8-209ENST00000635970 HIST1H4GQ99525 98 aa11.61□□□□□ -0.55
CLN8-209ENST00000635970 PRAC2D3DTV9 90 aa11.61□□□□□ -0.55
CLN8-209ENST00000635970 K7ERJ3 54 aa11.61□□□□□ -0.55
CLN8-209ENST00000635970 BRI3O95415 125 aa11.61□□□□□ -0.55
CLN8-209ENST00000635970 SPANXN1Q5VSR9 72 aa11.61□□□□□ -0.55
CLN8-209ENST00000635970 SPATA25Q9BR10 227 aa11.61□□□□□ -0.55
CLN8-209ENST00000635970 C20orf78Q9BR46 151 aa11.61□□□□□ -0.55
CLN8-209ENST00000635970 TTTY13Q9BZ97 58 aa11.61□□□□□ -0.55
CLN8-209ENST00000635970 PF4P02776 101 aa11.6□□□□□ -0.55
CLN8-209ENST00000635970 LGALS1P09382 135 aaKnown RBP11.6□□□□□ -0.55
CLN8-209ENST00000635970 RRN3P1Q2M238 152 aa11.6□□□□□ -0.55
CLN8-209ENST00000635970 C15orf32Q32M92 178 aa11.6□□□□□ -0.55
CLN8-209ENST00000635970 MAPKAPK5-AS1Q8N8E1 139 aa11.6□□□□□ -0.55
CLN8-209ENST00000635970 TRBV7-3A0A075B6L6 115 aa11.59□□□□□ -0.55
CLN8-209ENST00000635970 MYMXA0A1B0GTQ4 84 aa11.59□□□□□ -0.55
CLN8-209ENST00000635970 GAGE12HA6NDE8 117 aa11.59□□□□□ -0.55
CLN8-209ENST00000635970 LINC01549A6NIU2 74 aa11.59□□□□□ -0.55
CLN8-209ENST00000635970 OR11H12B2RN74 326 aa11.59□□□□□ -0.55
CLN8-209ENST00000635970 GAGE13Q4V321 117 aa11.59□□□□□ -0.55
CLN8-209ENST00000635970 OR11H1Q8NG94 326 aa11.59□□□□□ -0.55
CLN8-209ENST00000635970 OR11H2Q8NH07 326 aa11.59□□□□□ -0.55
CLN8-209ENST00000635970 METTL26Q96S19 204 aa11.59□□□□□ -0.55
CLN8-209ENST00000635970 SMIM2Q9BVW6 85 aa11.59□□□□□ -0.55
CLN8-209ENST00000635970 TRBV7-1A0A0A6YYK4 115 aa11.59□□□□□ -0.55
CLN8-209ENST00000635970 CCL24O00175 119 aa11.59□□□□□ -0.55
CLN8-209ENST00000635970 PPP1R17O96001 155 aa11.59□□□□□ -0.55
CLN8-209ENST00000635970 CLEC3BP05452 202 aa11.59□□□□□ -0.55
CLN8-209ENST00000635970 TOMM6Q96B49 74 aa11.59□□□□□ -0.55
CLN8-209ENST00000635970 C11orf21Q9P2W6 132 aa11.59□□□□□ -0.55
CLN8-209ENST00000635970 SELENOKQ9Y6D0 94 aa11.59□□□□□ -0.55
CLN8-209ENST00000635970 IGHV4OR15-8A0A075B7B6 117 aa11.58□□□□□ -0.56
CLN8-209ENST00000635970 A0A087WW49 117 aa11.58□□□□□ -0.56
CLN8-209ENST00000635970 TMEM238LA0A1B0GVL6 79 aa11.58□□□□□ -0.56
CLN8-209ENST00000635970 A6NJY4 79 aa11.58□□□□□ -0.56
CLN8-209ENST00000635970 FAM223BA6NKX1 122 aa11.58□□□□□ -0.56
CLN8-209ENST00000635970 TRBV12-3P01733 135 aa11.58□□□□□ -0.56
CLN8-209ENST00000635970 AZU1P20160 251 aa11.58□□□□□ -0.56
CLN8-209ENST00000635970 FAM223AQ8IWN6 122 aa11.58□□□□□ -0.56
CLN8-209ENST00000635970 RNF182Q8N6D2 247 aa11.58□□□□□ -0.56
CLN8-209ENST00000635970 EEF1AKMT3Q96AZ1 226 aa11.58□□□□□ -0.56
CLN8-209ENST00000635970 USMG5Q96IX5 58 aa11.58□□□□□ -0.56
CLN8-209ENST00000635970 UFC1Q9Y3C8 167 aa11.58□□□□□ -0.56
CLN8-209ENST00000635970 M0R381 172 aa11.57□□□□□ -0.56
CLN8-209ENST00000635970 ATP5G2Q06055 141 aa11.57□□□□□ -0.56
CLN8-209ENST00000635970 FHL3Q13643 280 aa11.57□□□□□ -0.56
CLN8-209ENST00000635970 WFDC2Q14508 124 aa11.57□□□□□ -0.56
CLN8-209ENST00000635970 LINC00482Q8N8I6 264 aa11.57□□□□□ -0.56
CLN8-209ENST00000635970 U3KQE9 123 aa11.57□□□□□ -0.56
CLN8-209ENST00000635970 TRAV8-2A0A0B4J237 113 aa11.56□□□□□ -0.56
CLN8-209ENST00000635970 MED14OSP0DP75 135 aa11.56□□□□□ -0.56
CLN8-209ENST00000635970 SLURP1P55000 103 aa11.56□□□□□ -0.56
CLN8-209ENST00000635970 NEXN-AS1Q8NBZ9 246 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms