RNA–Protein interactions for RNA: ENST00000635945.1

SCN2A-208, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 3,119 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-208ENST00000635945 SPG11Q96JI7 2443 aa5.71□□□□□ -1.49
SCN2A-208ENST00000635945 A8MZ25 164 aa5.71□□□□□ -1.5
SCN2A-208ENST00000635945 J3QQQ9 107 aa5.71□□□□□ -1.5
SCN2A-208ENST00000635945 RS1O15537 224 aa5.71□□□□□ -1.5
SCN2A-208ENST00000635945 IGHV3-33P01772 117 aa5.71□□□□□ -1.5
SCN2A-208ENST00000635945 RNASE4P34096 147 aaKnown RBP5.71□□□□□ -1.5
SCN2A-208ENST00000635945 ATP5J2P56134 94 aa5.71□□□□□ -1.5
SCN2A-208ENST00000635945 LINC01620Q4KN68 170 aa5.71□□□□□ -1.5
SCN2A-208ENST00000635945 RNASE6Q93091 150 aaKnown RBP5.71□□□□□ -1.5
SCN2A-208ENST00000635945 TRAV12-3A0A0B4J271 114 aa5.71□□□□□ -1.5
SCN2A-208ENST00000635945 G3V318 75 aa5.71□□□□□ -1.5
SCN2A-208ENST00000635945 C2orf82Q6UX34 121 aa5.71□□□□□ -1.5
SCN2A-208ENST00000635945 SLC25A29Q8N8R3 303 aa5.71□□□□□ -1.5
SCN2A-208ENST00000635945 EEF1AKMT3Q96AZ1 226 aa5.71□□□□□ -1.5
SCN2A-208ENST00000635945 CLPSL1A2RUU4 121 aa5.7□□□□□ -1.5
SCN2A-208ENST00000635945 MBD3L4A6NDZ8 208 aaPredicted RBP5.7□□□□□ -1.5
SCN2A-208ENST00000635945 MBD3L3A6NE82 208 aaPredicted RBP5.7□□□□□ -1.5
SCN2A-208ENST00000635945 MBD3L5A6NJ08 208 aaPredicted RBP5.7□□□□□ -1.5
SCN2A-208ENST00000635945 OOSP1A8MZH6 123 aa5.7□□□□□ -1.5
SCN2A-208ENST00000635945 RNF223E7ERA6 249 aa5.7□□□□□ -1.5
SCN2A-208ENST00000635945 TRIAP1O43715 76 aa5.7□□□□□ -1.5
SCN2A-208ENST00000635945 ZNF672Q499Z4 452 aaPredicted RBP5.7□□□□□ -1.5
SCN2A-208ENST00000635945 Q6ZS92 163 aa5.7□□□□□ -1.5
SCN2A-208ENST00000635945 SBSPONQ8IVN8 264 aa5.7□□□□□ -1.5
SCN2A-208ENST00000635945 DAND5Q8N907 189 aa5.7□□□□□ -1.5
SCN2A-208ENST00000635945 MBD3L2Q8NHZ7 208 aaPredicted RBP5.7□□□□□ -1.5
SCN2A-208ENST00000635945 C16orf92Q96LL3 132 aa5.7□□□□□ -1.5
SCN2A-208ENST00000635945 LINC00477Q96M19 166 aa5.7□□□□□ -1.5
SCN2A-208ENST00000635945 VPREB3Q9UKI3 123 aa5.7□□□□□ -1.5
SCN2A-208ENST00000635945 BUB3O43684 328 aa5.7□□□□□ -1.5
SCN2A-208ENST00000635945 A0A0U1RRA0 63 aa5.7□□□□□ -1.5
SCN2A-208ENST00000635945 H3BMM0 161 aa5.7□□□□□ -1.5
SCN2A-208ENST00000635945 CD59P13987 128 aa5.7□□□□□ -1.5
SCN2A-208ENST00000635945 PLA2G2CQ5R387 149 aa5.7□□□□□ -1.5
SCN2A-208ENST00000635945 COX8CQ7Z4L0 72 aa5.7□□□□□ -1.5
SCN2A-208ENST00000635945 UBE2WQ96B02 151 aa5.7□□□□□ -1.5
SCN2A-208ENST00000635945 C20orf173Q96LM9 149 aa5.7□□□□□ -1.5
SCN2A-208ENST00000635945 SLC50A1Q9BRV3 221 aa5.7□□□□□ -1.5
SCN2A-208ENST00000635945 TRAV8-3A0A0A6YYJ7 113 aa5.69□□□□□ -1.5
SCN2A-208ENST00000635945 FAM236AA0A1B0GUQ0 79 aa5.69□□□□□ -1.5
SCN2A-208ENST00000635945 FAM236BA0A1B0GV22 79 aa5.69□□□□□ -1.5
SCN2A-208ENST00000635945 LINC01619G3V211 115 aa5.69□□□□□ -1.5
SCN2A-208ENST00000635945 LINC00694P0DN24 101 aa5.69□□□□□ -1.5
SCN2A-208ENST00000635945 TMEM95Q3KNT9 176 aa5.69□□□□□ -1.5
SCN2A-208ENST00000635945 TMEM263Q8WUH6 116 aaKnown RBP5.69□□□□□ -1.5
SCN2A-208ENST00000635945 SPXQ9BT56 116 aa5.69□□□□□ -1.5
SCN2A-208ENST00000635945 DPH3P1Q9H4G8 78 aa5.69□□□□□ -1.5
SCN2A-208ENST00000635945 YAE1D1Q9NRH1 226 aa5.69□□□□□ -1.5
SCN2A-208ENST00000635945 TNFRSF18Q9Y5U5 241 aa5.69□□□□□ -1.5
SCN2A-208ENST00000635945 TRGV11A0A075B6L2 103 aa5.68□□□□□ -1.5
SCN2A-208ENST00000635945 E7EQL1 145 aa5.68□□□□□ -1.5
SCN2A-208ENST00000635945 IGKV3-20P01619 116 aa5.68□□□□□ -1.5
SCN2A-208ENST00000635945 ASIPP42127 132 aa5.68□□□□□ -1.5
SCN2A-208ENST00000635945 UBE2E1P51965 193 aa5.68□□□□□ -1.5
SCN2A-208ENST00000635945 PMVKQ15126 192 aa5.68□□□□□ -1.5
SCN2A-208ENST00000635945 C8orf31Q8N9H6 132 aa5.68□□□□□ -1.5
SCN2A-208ENST00000635945 CSPG4Q6UVK1 2322 aa5.68□□□□□ -1.5
SCN2A-208ENST00000635945 A0A0J9YXV3 536 aa5.68□□□□□ -1.5
SCN2A-208ENST00000635945 ATXN8Q156A1 80 aa5.68□□□□□ -1.5
SCN2A-208ENST00000635945 DUX5Q96PT3 197 aa5.68□□□□□ -1.5
SCN2A-208ENST00000635945 AMELXQ99217 191 aa5.68□□□□□ -1.5
SCN2A-208ENST00000635945 DPM3Q9P2X0 92 aa5.68□□□□□ -1.5
SCN2A-208ENST00000635945 CENPVL3A0A0U1RRI6 287 aa5.68□□□□□ -1.5
SCN2A-208ENST00000635945 CDX4O14627 284 aaPredicted RBP5.68□□□□□ -1.5
SCN2A-208ENST00000635945 ASCL5Q7RTU5 278 aa5.68□□□□□ -1.5
SCN2A-208ENST00000635945 GPHB5Q86YW7 130 aa5.68□□□□□ -1.5
SCN2A-208ENST00000635945 OR10J6PQ8NGY7 276 aa5.68□□□□□ -1.5
SCN2A-208ENST00000635945 A0A0G2JNJ9 132 aa5.67□□□□□ -1.5
SCN2A-208ENST00000635945 H7C423 109 aa5.67□□□□□ -1.5
SCN2A-208ENST00000635945 Q9UFV3 132 aa5.67□□□□□ -1.5
SCN2A-208ENST00000635945 TRAV41A0A0B4J266 112 aa5.67□□□□□ -1.5
SCN2A-208ENST00000635945 SDHAF1A6NFY7 115 aa5.67□□□□□ -1.5
SCN2A-208ENST00000635945 IGIPA6NJ69 53 aa5.67□□□□□ -1.5
SCN2A-208ENST00000635945 LGALS9O00182 355 aa5.67□□□□□ -1.5
SCN2A-208ENST00000635945 ZNF883P0CG24 379 aa5.67□□□□□ -1.5
SCN2A-208ENST00000635945 CELSR2Q9HCU4 2923 aa5.66□□□□□ -1.5
SCN2A-208ENST00000635945 LY6LH3BQJ8 138 aa5.66□□□□□ -1.5
SCN2A-208ENST00000635945 ADAMTSL4-AS1Q5T5F5 129 aa5.66□□□□□ -1.5
SCN2A-208ENST00000635945 NUP37Q8NFH4 326 aa5.66□□□□□ -1.5
SCN2A-208ENST00000635945 ZFAND3Q9H8U3 227 aa5.66□□□□□ -1.5
SCN2A-208ENST00000635945 OTOGLQ3ZCN5 2332 aa5.66□□□□□ -1.5
SCN2A-208ENST00000635945 IGHV3-73A0A0B4J1V6 119 aa5.66□□□□□ -1.5
SCN2A-208ENST00000635945 SUMO4Q6EEV6 95 aa5.66□□□□□ -1.5
SCN2A-208ENST00000635945 IGHV7-81A0A0B4J1V7 117 aa5.65□□□□□ -1.5
SCN2A-208ENST00000635945 ATP6V0E1O15342 81 aa5.65□□□□□ -1.5
SCN2A-208ENST00000635945 HTN1P15515 57 aa5.65□□□□□ -1.5
SCN2A-208ENST00000635945 SRSF2Q01130 221 aaKnown RBP5.65□□□□□ -1.5
SCN2A-208ENST00000635945 C9orf47Q6ZRZ4 202 aa5.65□□□□□ -1.5
SCN2A-208ENST00000635945 LINC01560Q8TB33 94 aa5.65□□□□□ -1.5
SCN2A-208ENST00000635945 CCDC140Q96MF4 163 aa5.65□□□□□ -1.5
SCN2A-208ENST00000635945 LINC01587Q99440 93 aa5.65□□□□□ -1.5
SCN2A-208ENST00000635945 TRBV10-2A0A0K0K1G8 114 aa5.65□□□□□ -1.5
SCN2A-208ENST00000635945 TRBV12-3P01733 135 aa5.65□□□□□ -1.5
SCN2A-208ENST00000635945 C9orf153Q5TBE3 101 aa5.65□□□□□ -1.5
SCN2A-208ENST00000635945 ZNF625Q96I27 306 aaPredicted RBP5.65□□□□□ -1.5
SCN2A-208ENST00000635945 KAAG1Q9UBP8 84 aa5.65□□□□□ -1.5
SCN2A-208ENST00000635945 IGHV3-11P01762 117 aa5.65□□□□□ -1.51
SCN2A-208ENST00000635945 RNASE3P12724 160 aaKnown RBP5.65□□□□□ -1.51
SCN2A-208ENST00000635945 VMO1Q7Z5L0 202 aa5.65□□□□□ -1.51
SCN2A-208ENST00000635945 PIP4P1Q86T03 277 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms