RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 OR5AL1P0C617 328 aa5.94□□□□□ -1.46
CDKL5-209ENST00000635828 LINC00315P59091 139 aa5.94□□□□□ -1.46
CDKL5-209ENST00000635828 TWIST1Q15672 202 aa5.94□□□□□ -1.46
CDKL5-209ENST00000635828 SPXQ9BT56 116 aa5.94□□□□□ -1.46
CDKL5-209ENST00000635828 NUDT3O95989 172 aa5.93□□□□□ -1.46
CDKL5-209ENST00000635828 TSKUQ8WUA8 353 aa5.93□□□□□ -1.46
CDKL5-209ENST00000635828 KIF25-AS1Q9Y6Z4 181 aa5.93□□□□□ -1.46
CDKL5-209ENST00000635828 TRAV10A0A0B4J240 114 aa5.93□□□□□ -1.46
CDKL5-209ENST00000635828 NDUFS6O75380 124 aaKnown RBP5.93□□□□□ -1.46
CDKL5-209ENST00000635828 MRPL54Q6P161 138 aaKnown RBP5.93□□□□□ -1.46
CDKL5-209ENST00000635828 HHLA3Q9XRX5 114 aa5.93□□□□□ -1.46
CDKL5-209ENST00000635828 TRGV4A0A0C4DH28 118 aa5.93□□□□□ -1.46
CDKL5-209ENST00000635828 RS1O15537 224 aa5.93□□□□□ -1.46
CDKL5-209ENST00000635828 S100A1P23297 94 aa5.93□□□□□ -1.46
CDKL5-209ENST00000635828 APLNQ9ULZ1 77 aa5.93□□□□□ -1.46
CDKL5-209ENST00000635828 GATA1P15976 413 aaPredicted RBP5.92□□□□□ -1.46
CDKL5-209ENST00000635828 CTRLP40313 264 aa5.92□□□□□ -1.46
CDKL5-209ENST00000635828 CRYBA4P53673 196 aa5.92□□□□□ -1.46
CDKL5-209ENST00000635828 TRAV4A0A0B4J268 109 aa5.92□□□□□ -1.46
CDKL5-209ENST00000635828 SMIM27A0A1W2PRY6 76 aa5.92□□□□□ -1.46
CDKL5-209ENST00000635828 C7orf77A4D0Y5 90 aa5.92□□□□□ -1.46
CDKL5-209ENST00000635828 CAMPP49913 170 aa5.92□□□□□ -1.46
CDKL5-209ENST00000635828 NXPH4O95158 308 aa5.92□□□□□ -1.46
CDKL5-209ENST00000635828 C15orf54Q8N8G6 183 aa5.92□□□□□ -1.46
CDKL5-209ENST00000635828 CLRN3Q8NCR9 226 aa5.92□□□□□ -1.46
CDKL5-209ENST00000635828 CARHSP1Q9Y2V2 147 aaKnown RBP5.92□□□□□ -1.46
CDKL5-209ENST00000635828 FAT2Q9NYQ8 4349 aa5.91□□□□□ -1.46
CDKL5-209ENST00000635828 A8MWL6 223 aa5.91□□□□□ -1.46
CDKL5-209ENST00000635828 SMKR1H3BMG3 65 aa5.91□□□□□ -1.46
CDKL5-209ENST00000635828 SCO1O75880 301 aa5.91□□□□□ -1.46
CDKL5-209ENST00000635828 ZFP82Q8N141 532 aa5.91□□□□□ -1.46
CDKL5-209ENST00000635828 K7EQD1 137 aa5.91□□□□□ -1.46
CDKL5-209ENST00000635828 MGPP08493 103 aa5.91□□□□□ -1.46
CDKL5-209ENST00000635828 RPS10P5Q9NQ39 176 aa5.91□□□□□ -1.46
CDKL5-209ENST00000635828 AMN1Q8IY45 258 aa5.91□□□□□ -1.46
CDKL5-209ENST00000635828 Q8N3U1 123 aa5.91□□□□□ -1.46
CDKL5-209ENST00000635828 C18orf15Q96N68 181 aa5.91□□□□□ -1.46
CDKL5-209ENST00000635828 IGHV3-38A0A0C4DH36 116 aa5.9□□□□□ -1.46
CDKL5-209ENST00000635828 GYPEP15421 78 aa5.9□□□□□ -1.46
CDKL5-209ENST00000635828 ZNF56Q15929 161 aa5.9□□□□□ -1.46
CDKL5-209ENST00000635828 BIN3Q9NQY0 253 aa5.9□□□□□ -1.46
CDKL5-209ENST00000635828 PAX4O43316 350 aa5.9□□□□□ -1.46
CDKL5-209ENST00000635828 AKR1D1P51857 326 aa5.9□□□□□ -1.46
CDKL5-209ENST00000635828 RPL39LQ96EH5 51 aaKnown RBP5.9□□□□□ -1.46
CDKL5-209ENST00000635828 CNFNQ9BYD5 112 aa5.9□□□□□ -1.46
CDKL5-209ENST00000635828 GAGE12JA6NER3 117 aa5.9□□□□□ -1.47
CDKL5-209ENST00000635828 NUPR2A6NF83 97 aa5.9□□□□□ -1.47
CDKL5-209ENST00000635828 F5H697 171 aa5.9□□□□□ -1.47
CDKL5-209ENST00000635828 NCR2O95944 276 aa5.9□□□□□ -1.47
CDKL5-209ENST00000635828 RPS10P46783 165 aaKnown RBP5.9□□□□□ -1.47
CDKL5-209ENST00000635828 GAGE1Q13065 139 aa5.9□□□□□ -1.47
CDKL5-209ENST00000635828 GAGE4Q13068 117 aa5.9□□□□□ -1.47
CDKL5-209ENST00000635828 GAGE5Q13069 117 aa5.9□□□□□ -1.47
CDKL5-209ENST00000635828 C21orf62-AS1Q17RA5 79 aa5.9□□□□□ -1.47
CDKL5-209ENST00000635828 GAGE13Q4V321 117 aa5.9□□□□□ -1.47
CDKL5-209ENST00000635828 CT83Q5H943 113 aa5.9□□□□□ -1.47
CDKL5-209ENST00000635828 CXCL1P09341 107 aa5.89□□□□□ -1.47
CDKL5-209ENST00000635828 RPS20P60866 119 aaKnown RBP5.89□□□□□ -1.47
CDKL5-209ENST00000635828 PNRC1Q12796 327 aaPredicted RBP5.89□□□□□ -1.47
CDKL5-209ENST00000635828 ESRGQ1W209 222 aa5.89□□□□□ -1.47
CDKL5-209ENST00000635828 NEGR1Q7Z3B1 354 aa5.89□□□□□ -1.47
CDKL5-209ENST00000635828 CBLN2Q8IUK8 224 aa5.89□□□□□ -1.47
CDKL5-209ENST00000635828 RNF185Q96GF1 192 aa5.89□□□□□ -1.47
CDKL5-209ENST00000635828 PRO0255Q9UI72 69 aa5.89□□□□□ -1.47
CDKL5-209ENST00000635828 KLK5Q9Y337 293 aaPredicted RBP5.89□□□□□ -1.47
CDKL5-209ENST00000635828 EPPK1P58107 5090 aaKnown RBP5.89□□□□□ -1.47
CDKL5-209ENST00000635828 PKHD1P08F94 4074 aa5.89□□□□□ -1.47
CDKL5-209ENST00000635828 A0A1W2PPQ1 181 aa5.89□□□□□ -1.47
CDKL5-209ENST00000635828 XKRY2A2RUG3 117 aa5.89□□□□□ -1.47
CDKL5-209ENST00000635828 MED14OSP0DP75 135 aa5.89□□□□□ -1.47
CDKL5-209ENST00000635828 SUMO4Q6EEV6 95 aa5.89□□□□□ -1.47
CDKL5-209ENST00000635828 SYT8Q8NBV8 401 aa5.89□□□□□ -1.47
CDKL5-209ENST00000635828 NDUFAF3Q9BU61 184 aa5.89□□□□□ -1.47
CDKL5-209ENST00000635828 NAT8BQ9UHF3 227 aa5.89□□□□□ -1.47
CDKL5-209ENST00000635828 A0A1B0GUT8 65 aa5.89□□□□□ -1.47
CDKL5-209ENST00000635828 A8MWV9 139 aa5.89□□□□□ -1.47
CDKL5-209ENST00000635828 C3orf84H3BNL1 204 aa5.89□□□□□ -1.47
CDKL5-209ENST00000635828 LY6G6CO95867 125 aa5.89□□□□□ -1.47
CDKL5-209ENST00000635828 GATD1Q8NB37 220 aa5.89□□□□□ -1.47
CDKL5-209ENST00000635828 F2Z2F3 143 aa5.88□□□□□ -1.47
CDKL5-209ENST00000635828 TGIF2-C20orf24A0A0A6YYL0 155 aa5.88□□□□□ -1.47
CDKL5-209ENST00000635828 TEX48A0A1B0GUV7 120 aa5.88□□□□□ -1.47
CDKL5-209ENST00000635828 GFRA4Q9GZZ7 299 aa5.88□□□□□ -1.47
CDKL5-209ENST00000635828 IGLV2-18A0A075B6J9 118 aa5.88□□□□□ -1.47
CDKL5-209ENST00000635828 MT-ND4LP03901 98 aa5.88□□□□□ -1.47
CDKL5-209ENST00000635828 ZNRF2Q8NHG8 242 aa5.88□□□□□ -1.47
CDKL5-209ENST00000635828 AP1S3Q96PC3 154 aa5.88□□□□□ -1.47
CDKL5-209ENST00000635828 LINC00588Q9Y4M8 146 aa5.88□□□□□ -1.47
CDKL5-209ENST00000635828 NEXN-AS1Q8NBZ9 246 aa5.87□□□□□ -1.47
CDKL5-209ENST00000635828 PTH2Q96A98 100 aa5.87□□□□□ -1.47
CDKL5-209ENST00000635828 IMMP2LQ96T52 175 aa5.87□□□□□ -1.47
CDKL5-209ENST00000635828 A0A1B0GXF2 115 aa5.87□□□□□ -1.47
CDKL5-209ENST00000635828 M0QY20 66 aa5.87□□□□□ -1.47
CDKL5-209ENST00000635828 RAB4AP20338 218 aa5.87□□□□□ -1.47
CDKL5-209ENST00000635828 ANAPC16Q96DE5 110 aa5.87□□□□□ -1.47
CDKL5-209ENST00000635828 DNAH6Q9C0G6 4158 aa5.87□□□□□ -1.47
CDKL5-209ENST00000635828 KIAA1644Q3SXP7 199 aa5.86□□□□□ -1.47
CDKL5-209ENST00000635828 PKD1P98161 4303 aa5.86□□□□□ -1.47
CDKL5-209ENST00000635828 M0R2N4 97 aa5.86□□□□□ -1.47
CDKL5-209ENST00000635828 SLAQ13239 276 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms