RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 FAM3BP58499 235 aaPredicted RBP6.76□□□□□ -1.33
LINC00339-210ENST00000635675 OR2D3Q8NGH3 330 aa6.76□□□□□ -1.33
LINC00339-210ENST00000635675 SSBP4Q9BWG4 385 aaPredicted RBP6.76□□□□□ -1.33
LINC00339-210ENST00000635675 CTDSP1Q9GZU7 261 aa6.76□□□□□ -1.33
LINC00339-210ENST00000635675 RPP21Q9H633 154 aaKnown RBP6.76□□□□□ -1.33
LINC00339-210ENST00000635675 BIN3Q9NQY0 253 aa6.76□□□□□ -1.33
LINC00339-210ENST00000635675 HYDINQ4G0P3 5121 aa6.76□□□□□ -1.33
LINC00339-210ENST00000635675 A0A096LPF7 62 aa6.76□□□□□ -1.33
LINC00339-210ENST00000635675 A0A1W2PPQ1 181 aa6.76□□□□□ -1.33
LINC00339-210ENST00000635675 MED14OSP0DP75 135 aa6.76□□□□□ -1.33
LINC00339-210ENST00000635675 GATA1P15976 413 aaPredicted RBP6.76□□□□□ -1.33
LINC00339-210ENST00000635675 TPPP3Q9BW30 176 aa6.76□□□□□ -1.33
LINC00339-210ENST00000635675 PHLDA3Q9Y5J5 127 aa6.76□□□□□ -1.33
LINC00339-210ENST00000635675 A8MWV9 139 aa6.75□□□□□ -1.33
LINC00339-210ENST00000635675 SSTP61278 116 aa6.75□□□□□ -1.33
LINC00339-210ENST00000635675 KCNIP4Q6PIL6 250 aa6.75□□□□□ -1.33
LINC00339-210ENST00000635675 FAM231DQ6ZW35 169 aa6.75□□□□□ -1.33
LINC00339-210ENST00000635675 UBE2DNLQ8IWF7 75 aa6.75□□□□□ -1.33
LINC00339-210ENST00000635675 SYT8Q8NBV8 401 aa6.75□□□□□ -1.33
LINC00339-210ENST00000635675 JPT2Q9H910 190 aa6.75□□□□□ -1.33
LINC00339-210ENST00000635675 TMA7Q9Y2S6 64 aaKnown RBP6.75□□□□□ -1.33
LINC00339-210ENST00000635675 VPS13DQ5THJ4 4388 aa6.74□□□□□ -1.33
LINC00339-210ENST00000635675 IGHV3-73A0A0B4J1V6 119 aa6.74□□□□□ -1.33
LINC00339-210ENST00000635675 SNAI2O43623 268 aa6.74□□□□□ -1.33
LINC00339-210ENST00000635675 NXPH4O95158 308 aa6.74□□□□□ -1.33
LINC00339-210ENST00000635675 OR5AL1P0C617 328 aa6.74□□□□□ -1.33
LINC00339-210ENST00000635675 CCL18P55774 89 aa6.74□□□□□ -1.33
LINC00339-210ENST00000635675 ELOBQ15370 118 aa6.74□□□□□ -1.33
LINC00339-210ENST00000635675 MRPL23Q16540 153 aaKnown RBP6.74□□□□□ -1.33
LINC00339-210ENST00000635675 ESRGQ1W209 222 aa6.74□□□□□ -1.33
LINC00339-210ENST00000635675 UFSP1Q6NVU6 142 aa6.74□□□□□ -1.33
LINC00339-210ENST00000635675 ZFP2Q6ZN57 461 aa6.74□□□□□ -1.33
LINC00339-210ENST00000635675 ZFP82Q8N141 532 aa6.74□□□□□ -1.33
LINC00339-210ENST00000635675 PGLYRP4Q96LB8 373 aa6.74□□□□□ -1.33
LINC00339-210ENST00000635675 SAMD10Q9BYL1 202 aa6.74□□□□□ -1.33
LINC00339-210ENST00000635675 LINC00588Q9Y4M8 146 aa6.74□□□□□ -1.33
LINC00339-210ENST00000635675 ICOSQ9Y6W8 199 aa6.74□□□□□ -1.33
LINC00339-210ENST00000635675 MUC21A0A0G2JKD1 596 aa6.73□□□□□ -1.33
LINC00339-210ENST00000635675 MUC21A0A140T8X8 626 aa6.73□□□□□ -1.33
LINC00339-210ENST00000635675 TRBV6-4A0A1B0GX49 114 aa6.73□□□□□ -1.33
LINC00339-210ENST00000635675 K7EQD1 137 aa6.73□□□□□ -1.33
LINC00339-210ENST00000635675 M0R381 172 aa6.73□□□□□ -1.33
LINC00339-210ENST00000635675 IGLC6P0CF74 106 aa6.73□□□□□ -1.33
LINC00339-210ENST00000635675 GYPEP15421 78 aa6.73□□□□□ -1.33
LINC00339-210ENST00000635675 RPS20P60866 119 aaKnown RBP6.73□□□□□ -1.33
LINC00339-210ENST00000635675 MRPL54Q6P161 138 aaKnown RBP6.73□□□□□ -1.33
LINC00339-210ENST00000635675 Q6ZSN1 163 aa6.73□□□□□ -1.33
LINC00339-210ENST00000635675 SLC25A29Q8N8R3 303 aa6.73□□□□□ -1.33
LINC00339-210ENST00000635675 OR10AG1Q8NH19 301 aa6.73□□□□□ -1.33
LINC00339-210ENST00000635675 LOC100131303A0A0U1RQF7 123 aa6.72□□□□□ -1.33
LINC00339-210ENST00000635675 COLCA2A8K830 154 aa6.72□□□□□ -1.33
LINC00339-210ENST00000635675 CRYGDP07320 174 aa6.72□□□□□ -1.33
LINC00339-210ENST00000635675 ZNRF2Q8NHG8 242 aa6.72□□□□□ -1.33
LINC00339-210ENST00000635675 YPEL4Q96NS1 127 aa6.72□□□□□ -1.33
LINC00339-210ENST00000635675 KMT2AQ03164 3969 aa6.72□□□□□ -1.33
LINC00339-210ENST00000635675 A0A087WWL8 130 aa6.71□□□□□ -1.34
LINC00339-210ENST00000635675 XKRY2A2RUG3 117 aa6.71□□□□□ -1.34
LINC00339-210ENST00000635675 HIGD1CA8MV81 97 aa6.71□□□□□ -1.34
LINC00339-210ENST00000635675 A8MWL6 223 aa6.71□□□□□ -1.34
LINC00339-210ENST00000635675 RPS10P46783 165 aaKnown RBP6.71□□□□□ -1.34
LINC00339-210ENST00000635675 LYPD5Q6UWN5 251 aa6.71□□□□□ -1.34
LINC00339-210ENST00000635675 NEGR1Q7Z3B1 354 aa6.71□□□□□ -1.34
LINC00339-210ENST00000635675 FER1L6-AS1Q8NA97 138 aa6.71□□□□□ -1.34
LINC00339-210ENST00000635675 TSKUQ8WUA8 353 aa6.71□□□□□ -1.34
LINC00339-210ENST00000635675 GTSF1Q8WW33 167 aa6.71□□□□□ -1.34
LINC00339-210ENST00000635675 TMEM242Q9NWH2 141 aa6.71□□□□□ -1.34
LINC00339-210ENST00000635675 MRPS16Q9Y3D3 137 aaKnown RBP6.71□□□□□ -1.34
LINC00339-210ENST00000635675 SMIM27A0A1W2PRY6 76 aa6.7□□□□□ -1.34
LINC00339-210ENST00000635675 F2Z2F3 143 aa6.7□□□□□ -1.34
LINC00339-210ENST00000635675 RHODO00212 210 aa6.7□□□□□ -1.34
LINC00339-210ENST00000635675 RAB5AP20339 215 aa6.7□□□□□ -1.34
LINC00339-210ENST00000635675 SRIP30626 198 aa6.7□□□□□ -1.34
LINC00339-210ENST00000635675 RAB4BP61018 213 aa6.7□□□□□ -1.34
LINC00339-210ENST00000635675 RHOHQ15669 191 aa6.7□□□□□ -1.34
LINC00339-210ENST00000635675 FAM74A4Q5TZK3 123 aa6.7□□□□□ -1.34
LINC00339-210ENST00000635675 SPANXN1Q5VSR9 72 aa6.7□□□□□ -1.34
LINC00339-210ENST00000635675 Q6ZR54 194 aa6.7□□□□□ -1.34
LINC00339-210ENST00000635675 NUP35Q8NFH5 326 aa6.7□□□□□ -1.34
LINC00339-210ENST00000635675 PRADC1Q9BSG0 188 aa6.7□□□□□ -1.34
LINC00339-210ENST00000635675 UPK3BQ9BT76 320 aa6.7□□□□□ -1.34
LINC00339-210ENST00000635675 NAT8BQ9UHF3 227 aa6.7□□□□□ -1.34
LINC00339-210ENST00000635675 IGLV2-18A0A075B6J9 118 aa6.69□□□□□ -1.34
LINC00339-210ENST00000635675 LCE2BO14633 110 aa6.69□□□□□ -1.34
LINC00339-210ENST00000635675 CAMPP49913 170 aa6.69□□□□□ -1.34
LINC00339-210ENST00000635675 CT83Q5H943 113 aa6.69□□□□□ -1.34
LINC00339-210ENST00000635675 LYZL1Q6UWQ5 148 aa6.69□□□□□ -1.34
LINC00339-210ENST00000635675 SH2D6Q7Z4S9 175 aa6.69□□□□□ -1.34
LINC00339-210ENST00000635675 IMMP2LQ96T52 175 aa6.69□□□□□ -1.34
LINC00339-210ENST00000635675 Q9H8V8 135 aa6.69□□□□□ -1.34
LINC00339-210ENST00000635675 Q9UF83 564 aa6.69□□□□□ -1.34
LINC00339-210ENST00000635675 M0R2N4 97 aa6.68□□□□□ -1.34
LINC00339-210ENST00000635675 CTRLP40313 264 aa6.68□□□□□ -1.34
LINC00339-210ENST00000635675 CACNG7P62955 275 aa6.68□□□□□ -1.34
LINC00339-210ENST00000635675 WDR73Q6P4I2 378 aa6.68□□□□□ -1.34
LINC00339-210ENST00000635675 C14orf178Q8N769 122 aaPredicted RBP6.68□□□□□ -1.34
LINC00339-210ENST00000635675 FRZBQ92765 325 aa6.68□□□□□ -1.34
LINC00339-210ENST00000635675 BORCS7Q96B45 105 aa6.68□□□□□ -1.34
LINC00339-210ENST00000635675 BTF3L4Q96K17 158 aa6.68□□□□□ -1.34
LINC00339-210ENST00000635675 CNFNQ9BYD5 112 aa6.68□□□□□ -1.34
LINC00339-210ENST00000635675 MSRB1Q9NZV6 116 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms