RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 C11orf68Q9H3H3 251 aaKnown RBP10.09□□□□□ -0.79
PHACTR4-209ENST00000633371 A0A087WWL8 130 aa10.08□□□□□ -0.8
PHACTR4-209ENST00000633371 A0A0J9YWU9 116 aa10.08□□□□□ -0.8
PHACTR4-209ENST00000633371 GAS8-AS1O95177 125 aa10.08□□□□□ -0.8
PHACTR4-209ENST00000633371 SLAQ13239 276 aa10.08□□□□□ -0.8
PHACTR4-209ENST00000633371 FAM104BQ5XKR9 115 aa10.08□□□□□ -0.8
PHACTR4-209ENST00000633371 AMN1Q8IY45 258 aa10.08□□□□□ -0.8
PHACTR4-209ENST00000633371 LYRM9A8MSI8 78 aa10.07□□□□□ -0.8
PHACTR4-209ENST00000633371 TRGC1P0CF51 173 aa10.07□□□□□ -0.8
PHACTR4-209ENST00000633371 RAB4AP20338 218 aa10.07□□□□□ -0.8
PHACTR4-209ENST00000633371 Q6ZSN1 163 aa10.07□□□□□ -0.8
PHACTR4-209ENST00000633371 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.07□□□□□ -0.8
PHACTR4-209ENST00000633371 ZNF479Q96JC4 524 aa10.07□□□□□ -0.8
PHACTR4-209ENST00000633371 NDUFAF3Q9BU61 184 aa10.07□□□□□ -0.8
PHACTR4-209ENST00000633371 RPS10P46783 165 aaKnown RBP10.06□□□□□ -0.8
PHACTR4-209ENST00000633371 RAB4BP61018 213 aa10.06□□□□□ -0.8
PHACTR4-209ENST00000633371 C12orf74Q32Q52 190 aa10.06□□□□□ -0.8
PHACTR4-209ENST00000633371 KIAA1644Q3SXP7 199 aa10.06□□□□□ -0.8
PHACTR4-209ENST00000633371 COX19Q49B96 90 aa10.06□□□□□ -0.8
PHACTR4-209ENST00000633371 MRPL51Q4U2R6 128 aaKnown RBP10.06□□□□□ -0.8
PHACTR4-209ENST00000633371 C18orf15Q96N68 181 aa10.06□□□□□ -0.8
PHACTR4-209ENST00000633371 AP1S3Q96PC3 154 aa10.06□□□□□ -0.8
PHACTR4-209ENST00000633371 MRPL18Q9H0U6 180 aaKnown RBP10.06□□□□□ -0.8
PHACTR4-209ENST00000633371 DPH3P1Q9H4G8 78 aa10.06□□□□□ -0.8
PHACTR4-209ENST00000633371 IGHV3-73A0A0B4J1V6 119 aa10.05□□□□□ -0.8
PHACTR4-209ENST00000633371 TRAV4A0A0B4J268 109 aa10.05□□□□□ -0.8
PHACTR4-209ENST00000633371 A8MWV9 139 aa10.05□□□□□ -0.8
PHACTR4-209ENST00000633371 IGHV3-53P01767 116 aa10.05□□□□□ -0.8
PHACTR4-209ENST00000633371 HLA-DQA1P01909 254 aa10.05□□□□□ -0.8
PHACTR4-209ENST00000633371 S100A8P05109 93 aa10.05□□□□□ -0.8
PHACTR4-209ENST00000633371 DEFB130BP0DP73 79 aa10.05□□□□□ -0.8
PHACTR4-209ENST00000633371 DEFB130AP0DP74 79 aa10.05□□□□□ -0.8
PHACTR4-209ENST00000633371 FABP9Q0Z7S8 132 aa10.05□□□□□ -0.8
PHACTR4-209ENST00000633371 ZMAT4Q9H898 229 aa10.05□□□□□ -0.8
PHACTR4-209ENST00000633371 SMKR1H3BMG3 65 aa10.04□□□□□ -0.8
PHACTR4-209ENST00000633371 TRGC2P03986 189 aa10.04□□□□□ -0.8
PHACTR4-209ENST00000633371 SPART-AS1P0CW21 52 aa10.04□□□□□ -0.8
PHACTR4-209ENST00000633371 GATA1P15976 413 aaPredicted RBP10.04□□□□□ -0.8
PHACTR4-209ENST00000633371 Q9UF83 564 aa10.04□□□□□ -0.8
PHACTR4-209ENST00000633371 TRAPPC1Q9Y5R8 145 aa10.04□□□□□ -0.8
PHACTR4-209ENST00000633371 U3KQK5 164 aa10.04□□□□□ -0.8
PHACTR4-209ENST00000633371 TRAV26-2A0A0B4J265 109 aa10.03□□□□□ -0.8
PHACTR4-209ENST00000633371 APCSP02743 223 aa10.03□□□□□ -0.8
PHACTR4-209ENST00000633371 MT-ND6P03923 174 aa10.03□□□□□ -0.8
PHACTR4-209ENST00000633371 NHLRC4P0CG21 123 aaPredicted RBP10.03□□□□□ -0.8
PHACTR4-209ENST00000633371 FHL2Q14192 279 aa10.03□□□□□ -0.8
PHACTR4-209ENST00000633371 FAM74A4Q5TZK3 123 aa10.03□□□□□ -0.8
PHACTR4-209ENST00000633371 OR4C5Q8NGB2 326 aa10.03□□□□□ -0.8
PHACTR4-209ENST00000633371 TRGV2A0A075B6R0 118 aa10.02□□□□□ -0.81
PHACTR4-209ENST00000633371 NCR2O95944 276 aa10.02□□□□□ -0.81
PHACTR4-209ENST00000633371 MGPP08493 103 aa10.02□□□□□ -0.81
PHACTR4-209ENST00000633371 HOXA5P20719 270 aa10.02□□□□□ -0.81
PHACTR4-209ENST00000633371 DAD1P61803 113 aa10.02□□□□□ -0.81
PHACTR4-209ENST00000633371 SUMO4Q6EEV6 95 aa10.02□□□□□ -0.81
PHACTR4-209ENST00000633371 ZFP2Q6ZN57 461 aa10.02□□□□□ -0.81
PHACTR4-209ENST00000633371 FRZBQ92765 325 aa10.02□□□□□ -0.81
PHACTR4-209ENST00000633371 FBN3Q75N90 2809 aa10.01□□□□□ -0.81
PHACTR4-209ENST00000633371 M0QY20 66 aa10.01□□□□□ -0.81
PHACTR4-209ENST00000633371 SMIM15Q7Z3B0 74 aa10.01□□□□□ -0.81
PHACTR4-209ENST00000633371 NRACQ8N912 160 aa10.01□□□□□ -0.81
PHACTR4-209ENST00000633371 D6R8Y8 96 aa10□□□□□ -0.81
PHACTR4-209ENST00000633371 RHODO00212 210 aa10□□□□□ -0.81
PHACTR4-209ENST00000633371 SMIM17P0DL12 118 aa10□□□□□ -0.81
PHACTR4-209ENST00000633371 P0DMU3 169 aa10□□□□□ -0.81
PHACTR4-209ENST00000633371 FAM231AP0DMU4 169 aa10□□□□□ -0.81
PHACTR4-209ENST00000633371 FAM231CP0DMU5 169 aa10□□□□□ -0.81
PHACTR4-209ENST00000633371 NANOS2P60321 138 aaKnown RBP10□□□□□ -0.81
PHACTR4-209ENST00000633371 ALKBH7Q9BT30 221 aaPredicted RBP10□□□□□ -0.81
PHACTR4-209ENST00000633371 EDA2RQ9HAV5 297 aa10□□□□□ -0.81
PHACTR4-209ENST00000633371 STAB2Q8WWQ8 2551 aa9.99□□□□□ -0.81
PHACTR4-209ENST00000633371 NPYP01303 97 aa9.99□□□□□ -0.81
PHACTR4-209ENST00000633371 ZNF56Q15929 161 aa9.99□□□□□ -0.81
PHACTR4-209ENST00000633371 Q6ZTC4 211 aa9.99□□□□□ -0.81
PHACTR4-209ENST00000633371 RPL39LQ96EH5 51 aaKnown RBP9.99□□□□□ -0.81
PHACTR4-209ENST00000633371 MRAP2Q96G30 205 aa9.99□□□□□ -0.81
PHACTR4-209ENST00000633371 TEX48A0A1B0GUV7 120 aa9.98□□□□□ -0.81
PHACTR4-209ENST00000633371 F5H697 171 aa9.98□□□□□ -0.81
PHACTR4-209ENST00000633371 SLC25A29Q8N8R3 303 aa9.98□□□□□ -0.81
PHACTR4-209ENST00000633371 CIDEAO60543 219 aa9.97□□□□□ -0.81
PHACTR4-209ENST00000633371 SRIP30626 198 aa9.97□□□□□ -0.81
PHACTR4-209ENST00000633371 CKS2P33552 79 aa9.97□□□□□ -0.81
PHACTR4-209ENST00000633371 C11orf45Q8TAV5 145 aa9.97□□□□□ -0.81
PHACTR4-209ENST00000633371 PRELID3AQ96N28 172 aa9.97□□□□□ -0.81
PHACTR4-209ENST00000633371 TRGV4A0A0C4DH28 118 aa9.96□□□□□ -0.82
PHACTR4-209ENST00000633371 LOC100131303A0A0U1RQF7 123 aa9.96□□□□□ -0.82
PHACTR4-209ENST00000633371 ATP5G1P05496 136 aa9.96□□□□□ -0.82
PHACTR4-209ENST00000633371 CRYBA4P53673 196 aa9.96□□□□□ -0.82
PHACTR4-209ENST00000633371 ORMDL3Q8N138 153 aa9.96□□□□□ -0.82
PHACTR4-209ENST00000633371 NEXN-AS1Q8NBZ9 246 aa9.96□□□□□ -0.82
PHACTR4-209ENST00000633371 VSIG2Q96IQ7 327 aa9.96□□□□□ -0.82
PHACTR4-209ENST00000633371 HIST1H2BKO60814 126 aa9.95□□□□□ -0.82
PHACTR4-209ENST00000633371 TNFRSF6BO95407 300 aa9.95□□□□□ -0.82
PHACTR4-209ENST00000633371 PPBPP02775 128 aa9.95□□□□□ -0.82
PHACTR4-209ENST00000633371 HIST1H2BJP06899 126 aa9.95□□□□□ -0.82
PHACTR4-209ENST00000633371 HIST1H2BOP23527 126 aa9.95□□□□□ -0.82
PHACTR4-209ENST00000633371 HIST1H2BBP33778 126 aa9.95□□□□□ -0.82
PHACTR4-209ENST00000633371 HIST1H2BDP58876 126 aa9.95□□□□□ -0.82
PHACTR4-209ENST00000633371 HIST1H2BCP62807 126 aa9.95□□□□□ -0.82
PHACTR4-209ENST00000633371 HIST2H2BEQ16778 126 aa9.95□□□□□ -0.82
PHACTR4-209ENST00000633371 IQCJQ1A5X6 159 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms