RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 ORMDL2Q53FV1 153 aa4.09□□□□□ -1.75
NEK3-211ENST00000629912 LURAP1LQ8IV03 231 aa4.09□□□□□ -1.75
NEK3-211ENST00000629912 ATOH7Q8N100 152 aa4.09□□□□□ -1.75
NEK3-211ENST00000629912 TMEM158Q8WZ71 300 aa4.09□□□□□ -1.75
NEK3-211ENST00000629912 ZMAT4Q9H898 229 aa4.09□□□□□ -1.75
NEK3-211ENST00000629912 MRPS16Q9Y3D3 137 aaKnown RBP4.09□□□□□ -1.75
NEK3-211ENST00000629912 NF1P21359 2839 aa4.09□□□□□ -1.75
NEK3-211ENST00000629912 VCYO14598 125 aa4.08□□□□□ -1.76
NEK3-211ENST00000629912 RBMY1A1P0DJD3 496 aaKnown RBP4.08□□□□□ -1.76
NEK3-211ENST00000629912 RBMY1CP0DJD4 496 aa4.08□□□□□ -1.76
NEK3-211ENST00000629912 FXYD7P58549 80 aa4.08□□□□□ -1.76
NEK3-211ENST00000629912 RBMY1FQ15415 496 aaKnown RBP4.08□□□□□ -1.76
NEK3-211ENST00000629912 ODF3L2Q3SX64 289 aa4.08□□□□□ -1.76
NEK3-211ENST00000629912 NDUFA11Q86Y39 141 aa4.08□□□□□ -1.76
NEK3-211ENST00000629912 C11orf44Q8N8P7 122 aa4.08□□□□□ -1.76
NEK3-211ENST00000629912 GCN1Q92616 2671 aaKnown RBP4.08□□□□□ -1.76
NEK3-211ENST00000629912 SMR3AQ99954 134 aa4.08□□□□□ -1.76
NEK3-211ENST00000629912 PMCHL2Q9BQD1 86 aa4.08□□□□□ -1.76
NEK3-211ENST00000629912 SPXQ9BT56 116 aa4.08□□□□□ -1.76
NEK3-211ENST00000629912 SNHG12Q9BXW3 62 aa4.08□□□□□ -1.76
NEK3-211ENST00000629912 EDA2RQ9HAV5 297 aa4.08□□□□□ -1.76
NEK3-211ENST00000629912 GOLT1BQ9Y3E0 138 aa4.08□□□□□ -1.76
NEK3-211ENST00000629912 HIVEP2P31629 2446 aa4.07□□□□□ -1.76
NEK3-211ENST00000629912 TRBV27A0A0K0K1C4 114 aa4.07□□□□□ -1.76
NEK3-211ENST00000629912 A0A1W2PRX2 142 aa4.07□□□□□ -1.76
NEK3-211ENST00000629912 hDV102S1A0JD36 115 aa4.07□□□□□ -1.76
NEK3-211ENST00000629912 CBY3A6NI87 242 aa4.07□□□□□ -1.76
NEK3-211ENST00000629912 OR11H12B2RN74 326 aa4.07□□□□□ -1.76
NEK3-211ENST00000629912 M0QY20 66 aa4.07□□□□□ -1.76
NEK3-211ENST00000629912 M0R2P5 195 aa4.07□□□□□ -1.76
NEK3-211ENST00000629912 TCAPO15273 167 aa4.07□□□□□ -1.76
NEK3-211ENST00000629912 NUDT3O95989 172 aa4.07□□□□□ -1.76
NEK3-211ENST00000629912 IGLV1-51P01701 117 aa4.07□□□□□ -1.76
NEK3-211ENST00000629912 MGPP08493 103 aa4.07□□□□□ -1.76
NEK3-211ENST00000629912 ZNF124Q15973 351 aa4.07□□□□□ -1.76
NEK3-211ENST00000629912 BEAN1Q3B7T3 259 aa4.07□□□□□ -1.76
NEK3-211ENST00000629912 ZNF876PQ49A33 203 aa4.07□□□□□ -1.76
NEK3-211ENST00000629912 HIST2H2BDQ6DRA6 164 aa4.07□□□□□ -1.76
NEK3-211ENST00000629912 SUMO4Q6EEV6 95 aa4.07□□□□□ -1.76
NEK3-211ENST00000629912 Q6ZN92 141 aa4.07□□□□□ -1.76
NEK3-211ENST00000629912 TRPT1Q86TN4 253 aaKnown RBP4.07□□□□□ -1.76
NEK3-211ENST00000629912 TOMM6Q96B49 74 aa4.07□□□□□ -1.76
NEK3-211ENST00000629912 RPL39LQ96EH5 51 aaKnown RBP4.07□□□□□ -1.76
NEK3-211ENST00000629912 MCRIP2Q9BUT9 160 aaKnown RBP4.07□□□□□ -1.76
NEK3-211ENST00000629912 CSTL1Q9H114 145 aa4.07□□□□□ -1.76
NEK3-211ENST00000629912 JPT2Q9H910 190 aa4.07□□□□□ -1.76
NEK3-211ENST00000629912 WNK1Q9H4A3 2382 aa4.07□□□□□ -1.76
NEK3-211ENST00000629912 FASNP49327 2511 aaKnown RBP4.06□□□□□ -1.76
NEK3-211ENST00000629912 A0A087WX48 190 aa4.06□□□□□ -1.76
NEK3-211ENST00000629912 TRAV12-1A0A0B4J245 112 aa4.06□□□□□ -1.76
NEK3-211ENST00000629912 A8MWV9 139 aa4.06□□□□□ -1.76
NEK3-211ENST00000629912 F5H697 171 aa4.06□□□□□ -1.76
NEK3-211ENST00000629912 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.06□□□□□ -1.76
NEK3-211ENST00000629912 DLEU1O43261 78 aa4.06□□□□□ -1.76
NEK3-211ENST00000629912 INSP01308 110 aa4.06□□□□□ -1.76
NEK3-211ENST00000629912 PRSS1P07477 247 aa4.06□□□□□ -1.76
NEK3-211ENST00000629912 COX8AP10176 69 aa4.06□□□□□ -1.76
NEK3-211ENST00000629912 HNRNPA3P51991 378 aaKnown RBP4.06□□□□□ -1.76
NEK3-211ENST00000629912 RIPPLY3P57055 190 aa4.06□□□□□ -1.76
NEK3-211ENST00000629912 KRTAP10-3P60369 221 aa4.06□□□□□ -1.76
NEK3-211ENST00000629912 NUTF2P61970 127 aaKnown RBP4.06□□□□□ -1.76
NEK3-211ENST00000629912 ZNF415Q09FC8 603 aa4.06□□□□□ -1.76
NEK3-211ENST00000629912 ODF1Q14990 250 aa4.06□□□□□ -1.76
NEK3-211ENST00000629912 UFSP1Q6NVU6 142 aa4.06□□□□□ -1.76
NEK3-211ENST00000629912 SLC25A34Q6PIV7 304 aa4.06□□□□□ -1.76
NEK3-211ENST00000629912 ERASQ7Z444 233 aa4.06□□□□□ -1.76
NEK3-211ENST00000629912 STHQ8IWL8 128 aa4.06□□□□□ -1.76
NEK3-211ENST00000629912 C18orf15Q96N68 181 aa4.06□□□□□ -1.76
NEK3-211ENST00000629912 LINC01587Q99440 93 aa4.06□□□□□ -1.76
NEK3-211ENST00000629912 C19orf73Q9NVV2 129 aa4.06□□□□□ -1.76
NEK3-211ENST00000629912 DKK2Q9UBU2 259 aa4.06□□□□□ -1.76
NEK3-211ENST00000629912 HHLA3Q9XRX5 114 aa4.06□□□□□ -1.76
NEK3-211ENST00000629912 A0A087WWL8 130 aa4.05□□□□□ -1.76
NEK3-211ENST00000629912 H0Y8G0 127 aa4.05□□□□□ -1.76
NEK3-211ENST00000629912 H7C1H1 209 aa4.05□□□□□ -1.76
NEK3-211ENST00000629912 EREGO14944 169 aa4.05□□□□□ -1.76
NEK3-211ENST00000629912 SIVA1O15304 175 aa4.05□□□□□ -1.76
NEK3-211ENST00000629912 RS1O15537 224 aa4.05□□□□□ -1.76
NEK3-211ENST00000629912 SAP30O75446 220 aa4.05□□□□□ -1.76
NEK3-211ENST00000629912 CRLF1O75462 422 aa4.05□□□□□ -1.76
NEK3-211ENST00000629912 DPM2O94777 84 aa4.05□□□□□ -1.76
NEK3-211ENST00000629912 RHOHQ15669 191 aa4.05□□□□□ -1.76
NEK3-211ENST00000629912 ANKRD39Q53RE8 183 aa4.05□□□□□ -1.76
NEK3-211ENST00000629912 MORN3Q6PF18 240 aaPredicted RBP4.05□□□□□ -1.76
NEK3-211ENST00000629912 C2orf66Q6UXQ4 117 aa4.05□□□□□ -1.76
NEK3-211ENST00000629912 ZFP2Q6ZN57 461 aa4.05□□□□□ -1.76
NEK3-211ENST00000629912 C1orf158Q8N1D5 194 aa4.05□□□□□ -1.76
NEK3-211ENST00000629912 C11orf72Q8NBR9 251 aa4.05□□□□□ -1.76
NEK3-211ENST00000629912 SCGB3A1Q96QR1 104 aa4.05□□□□□ -1.76
NEK3-211ENST00000629912 NACAE9PAV3 2078 aa4.05□□□□□ -1.76
NEK3-211ENST00000629912 MTORP42345 2549 aa4.04□□□□□ -1.76
NEK3-211ENST00000629912 SDHAF1A6NFY7 115 aa4.04□□□□□ -1.76
NEK3-211ENST00000629912 IGIPA6NJ69 53 aa4.04□□□□□ -1.76
NEK3-211ENST00000629912 INAFM1C9JVW0 142 aa4.04□□□□□ -1.76
NEK3-211ENST00000629912 RHODO00212 210 aa4.04□□□□□ -1.76
NEK3-211ENST00000629912 IGKCP01834 107 aa4.04□□□□□ -1.76
NEK3-211ENST00000629912 FGF6P10767 208 aa4.04□□□□□ -1.76
NEK3-211ENST00000629912 INSL3P51460 131 aa4.04□□□□□ -1.76
NEK3-211ENST00000629912 NSUN5P1Q3KNT7 163 aa4.04□□□□□ -1.76
NEK3-211ENST00000629912 COL5A1-AS1Q5SY13 56 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms