RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 OR2D3Q8NGH3 330 aa3.85□□□□□ -1.79
LINC00550-202ENST00000629570 OR10AG1Q8NH19 301 aa3.85□□□□□ -1.79
LINC00550-202ENST00000629570 OCC1Q8TAD7 63 aa3.85□□□□□ -1.79
LINC00550-202ENST00000629570 PTH2Q96A98 100 aa3.85□□□□□ -1.79
LINC00550-202ENST00000629570 SMIM7Q9BQ49 75 aa3.85□□□□□ -1.79
LINC00550-202ENST00000629570 SAMD10Q9BYL1 202 aa3.85□□□□□ -1.79
LINC00550-202ENST00000629570 RNASE7Q9H1E1 156 aaKnown RBP3.85□□□□□ -1.79
LINC00550-202ENST00000629570 PRO0255Q9UI72 69 aa3.85□□□□□ -1.79
LINC00550-202ENST00000629570 HHLA3Q9XRX5 114 aa3.85□□□□□ -1.79
LINC00550-202ENST00000629570 PHLDA3Q9Y5J5 127 aa3.85□□□□□ -1.79
LINC00550-202ENST00000629570 A0A087WWL8 130 aa3.84□□□□□ -1.79
LINC00550-202ENST00000629570 LOC100131303A0A0U1RQF7 123 aa3.84□□□□□ -1.79
LINC00550-202ENST00000629570 ZNF727A8MUV8 499 aa3.84□□□□□ -1.79
LINC00550-202ENST00000629570 H3BNG1 76 aa3.84□□□□□ -1.79
LINC00550-202ENST00000629570 SNAI2O43623 268 aa3.84□□□□□ -1.79
LINC00550-202ENST00000629570 NXPH4O95158 308 aa3.84□□□□□ -1.79
LINC00550-202ENST00000629570 P01737 135 aa3.84□□□□□ -1.79
LINC00550-202ENST00000629570 CXCL1P09341 107 aa3.84□□□□□ -1.79
LINC00550-202ENST00000629570 IGLC6P0CF74 106 aa3.84□□□□□ -1.79
LINC00550-202ENST00000629570 GYPEP15421 78 aa3.84□□□□□ -1.79
LINC00550-202ENST00000629570 GATA1P15976 413 aaPredicted RBP3.84□□□□□ -1.79
LINC00550-202ENST00000629570 SSTP61278 116 aa3.84□□□□□ -1.79
LINC00550-202ENST00000629570 IFITM2Q01629 132 aa3.84□□□□□ -1.79
LINC00550-202ENST00000629570 FAM74A4Q5TZK3 123 aa3.84□□□□□ -1.79
LINC00550-202ENST00000629570 UFSP1Q6NVU6 142 aa3.84□□□□□ -1.79
LINC00550-202ENST00000629570 Q6ZSN1 163 aa3.84□□□□□ -1.79
LINC00550-202ENST00000629570 LINC01551Q86U37 167 aa3.84□□□□□ -1.79
LINC00550-202ENST00000629570 ZFP82Q8N141 532 aa3.84□□□□□ -1.79
LINC00550-202ENST00000629570 SLC25A29Q8N8R3 303 aa3.84□□□□□ -1.79
LINC00550-202ENST00000629570 NUDT10Q8NFP7 164 aa3.84□□□□□ -1.79
LINC00550-202ENST00000629570 DAZAP1Q96EP5 407 aaKnown RBP3.84□□□□□ -1.79
LINC00550-202ENST00000629570 NUDT11Q96G61 164 aa3.84□□□□□ -1.79
LINC00550-202ENST00000629570 TPPP3Q9BW30 176 aa3.84□□□□□ -1.79
LINC00550-202ENST00000629570 RPP21Q9H633 154 aaKnown RBP3.84□□□□□ -1.79
LINC00550-202ENST00000629570 IGLV2-18A0A075B6J9 118 aa3.83□□□□□ -1.8
LINC00550-202ENST00000629570 A8MWV9 139 aa3.83□□□□□ -1.8
LINC00550-202ENST00000629570 K7EQD1 137 aa3.83□□□□□ -1.8
LINC00550-202ENST00000629570 NDUFS6O75380 124 aaKnown RBP3.83□□□□□ -1.8
LINC00550-202ENST00000629570 CRYGDP07320 174 aa3.83□□□□□ -1.8
LINC00550-202ENST00000629570 OR5AL1P0C617 328 aa3.83□□□□□ -1.8
LINC00550-202ENST00000629570 CCL18P55774 89 aa3.83□□□□□ -1.8
LINC00550-202ENST00000629570 RAB14P61106 215 aa3.83□□□□□ -1.8
LINC00550-202ENST00000629570 SLAQ13239 276 aa3.83□□□□□ -1.8
LINC00550-202ENST00000629570 PEA15Q15121 130 aa3.83□□□□□ -1.8
LINC00550-202ENST00000629570 ESRGQ1W209 222 aa3.83□□□□□ -1.8
LINC00550-202ENST00000629570 PIK3CD-AS1Q5SR53 167 aa3.83□□□□□ -1.8
LINC00550-202ENST00000629570 SPANXN1Q5VSR9 72 aa3.83□□□□□ -1.8
LINC00550-202ENST00000629570 FER1L6-AS1Q8NA97 138 aa3.83□□□□□ -1.8
LINC00550-202ENST00000629570 SFRP2Q96HF1 295 aa3.83□□□□□ -1.8
LINC00550-202ENST00000629570 BIN3Q9NQY0 253 aa3.83□□□□□ -1.8
LINC00550-202ENST00000629570 Q9UF83 564 aa3.83□□□□□ -1.8
LINC00550-202ENST00000629570 LINC00588Q9Y4M8 146 aa3.83□□□□□ -1.8
LINC00550-202ENST00000629570 ICOSQ9Y6W8 199 aa3.83□□□□□ -1.8
LINC00550-202ENST00000629570 TRBV6-4A0A1B0GX49 114 aa3.82□□□□□ -1.8
LINC00550-202ENST00000629570 XKRY2A2RUG3 117 aa3.82□□□□□ -1.8
LINC00550-202ENST00000629570 SRIP30626 198 aa3.82□□□□□ -1.8
LINC00550-202ENST00000629570 CTRLP40313 264 aa3.82□□□□□ -1.8
LINC00550-202ENST00000629570 ERVFC1-1P60608 527 aa3.82□□□□□ -1.8
LINC00550-202ENST00000629570 RPS20P60866 119 aaKnown RBP3.82□□□□□ -1.8
LINC00550-202ENST00000629570 RHOHQ15669 191 aa3.82□□□□□ -1.8
LINC00550-202ENST00000629570 MRPL23Q16540 153 aaKnown RBP3.82□□□□□ -1.8
LINC00550-202ENST00000629570 RNF212Q495C1 297 aa3.82□□□□□ -1.8
LINC00550-202ENST00000629570 CLLU1Q5K131 121 aa3.82□□□□□ -1.8
LINC00550-202ENST00000629570 LYZL1Q6UWQ5 148 aa3.82□□□□□ -1.8
LINC00550-202ENST00000629570 ZFP2Q6ZN57 461 aa3.82□□□□□ -1.8
LINC00550-202ENST00000629570 FAM231DQ6ZW35 169 aa3.82□□□□□ -1.8
LINC00550-202ENST00000629570 C14orf178Q8N769 122 aaPredicted RBP3.82□□□□□ -1.8
LINC00550-202ENST00000629570 ZNRF2Q8NHG8 242 aa3.82□□□□□ -1.8
LINC00550-202ENST00000629570 GTSF1Q8WW33 167 aa3.82□□□□□ -1.8
LINC00550-202ENST00000629570 MSRB1Q9NZV6 116 aa3.82□□□□□ -1.8
LINC00550-202ENST00000629570 LY96Q9Y6Y9 160 aa3.82□□□□□ -1.8
LINC00550-202ENST00000629570 DNAH6Q9C0G6 4158 aa3.81□□□□□ -1.8
LINC00550-202ENST00000629570 M0R2N4 97 aa3.81□□□□□ -1.8
LINC00550-202ENST00000629570 RHODO00212 210 aa3.81□□□□□ -1.8
LINC00550-202ENST00000629570 GATCO43716 136 aaKnown RBP3.81□□□□□ -1.8
LINC00550-202ENST00000629570 CIDEAO60543 219 aa3.81□□□□□ -1.8
LINC00550-202ENST00000629570 LINC00694P0DN24 101 aa3.81□□□□□ -1.8
LINC00550-202ENST00000629570 FAM3BP58499 235 aaPredicted RBP3.81□□□□□ -1.8
LINC00550-202ENST00000629570 RPL23P62829 140 aaKnown RBP3.81□□□□□ -1.8
LINC00550-202ENST00000629570 ADIRFQ15847 76 aa3.81□□□□□ -1.8
LINC00550-202ENST00000629570 TMEM241Q24JQ0 296 aa3.81□□□□□ -1.8
LINC00550-202ENST00000629570 FAM74A3Q4VXF1 159 aa3.81□□□□□ -1.8
LINC00550-202ENST00000629570 SOHLH1Q5JUK2 328 aa3.81□□□□□ -1.8
LINC00550-202ENST00000629570 NEGR1Q7Z3B1 354 aa3.81□□□□□ -1.8
LINC00550-202ENST00000629570 ISOC2Q96AB3 205 aa3.81□□□□□ -1.8
LINC00550-202ENST00000629570 AP1S3Q96PC3 154 aa3.81□□□□□ -1.8
LINC00550-202ENST00000629570 PRADC1Q9BSG0 188 aa3.81□□□□□ -1.8
LINC00550-202ENST00000629570 SMDT1Q9H4I9 107 aa3.81□□□□□ -1.8
LINC00550-202ENST00000629570 NAT8Q9UHE5 227 aa3.81□□□□□ -1.8
LINC00550-202ENST00000629570 MRPS16Q9Y3D3 137 aaKnown RBP3.81□□□□□ -1.8
LINC00550-202ENST00000629570 KIF25-AS1Q9Y6Z4 181 aa3.81□□□□□ -1.8
LINC00550-202ENST00000629570 EPPK1P58107 5090 aaKnown RBP3.8□□□□□ -1.8
LINC00550-202ENST00000629570 A0A1W2PPQ1 181 aa3.8□□□□□ -1.8
LINC00550-202ENST00000629570 GAGE12JA6NER3 117 aa3.8□□□□□ -1.8
LINC00550-202ENST00000629570 A8MWL6 223 aa3.8□□□□□ -1.8
LINC00550-202ENST00000629570 F2Z2F3 143 aa3.8□□□□□ -1.8
LINC00550-202ENST00000629570 NTF3P20783 257 aa3.8□□□□□ -1.8
LINC00550-202ENST00000629570 EVI2AP22794 236 aa3.8□□□□□ -1.8
LINC00550-202ENST00000629570 LINC00315P59091 139 aa3.8□□□□□ -1.8
LINC00550-202ENST00000629570 CACNG7P62955 275 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms