RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 GNG4P50150 75 aa7.56□□□□□ -1.2
DDX41-219ENST00000629036 RHOHQ15669 191 aa7.56□□□□□ -1.2
DDX41-219ENST00000629036 Q6ZRN7 208 aaPredicted RBP7.56□□□□□ -1.2
DDX41-219ENST00000629036 LINC00336Q6ZUF6 198 aa7.56□□□□□ -1.2
DDX41-219ENST00000629036 WFDC10BQ8IUB3 73 aa7.56□□□□□ -1.2
DDX41-219ENST00000629036 FAM210AQ96ND0 272 aa7.56□□□□□ -1.2
DDX41-219ENST00000629036 KIF25-AS1Q9Y6Z4 181 aa7.56□□□□□ -1.2
DDX41-219ENST00000629036 M0R381 172 aa7.55□□□□□ -1.2
DDX41-219ENST00000629036 LINC00315P59091 139 aa7.55□□□□□ -1.2
DDX41-219ENST00000629036 TOR2AQ5JU69 321 aa7.55□□□□□ -1.2
DDX41-219ENST00000629036 TEX261Q6UWH6 196 aa7.55□□□□□ -1.2
DDX41-219ENST00000629036 ZFP82Q8N141 532 aa7.55□□□□□ -1.2
DDX41-219ENST00000629036 PCNPQ8WW12 178 aaKnown RBP7.55□□□□□ -1.2
DDX41-219ENST00000629036 PHLDA3Q9Y5J5 127 aa7.55□□□□□ -1.2
DDX41-219ENST00000629036 A0A087WWL8 130 aa7.54□□□□□ -1.2
DDX41-219ENST00000629036 A0A1W2PPQ1 181 aa7.54□□□□□ -1.2
DDX41-219ENST00000629036 C9JQL5 133 aa7.54□□□□□ -1.2
DDX41-219ENST00000629036 RHODO00212 210 aa7.54□□□□□ -1.2
DDX41-219ENST00000629036 C1orf134Q5TEV5 83 aa7.54□□□□□ -1.2
DDX41-219ENST00000629036 C6orf223Q8N319 242 aa7.54□□□□□ -1.2
DDX41-219ENST00000629036 SYT8Q8NBV8 401 aa7.54□□□□□ -1.2
DDX41-219ENST00000629036 OCC1Q8TAD7 63 aa7.54□□□□□ -1.2
DDX41-219ENST00000629036 MUC21A0A0G2JKD1 596 aa7.53□□□□□ -1.2
DDX41-219ENST00000629036 MUC21A0A140T8X8 626 aa7.53□□□□□ -1.2
DDX41-219ENST00000629036 PRSS29PA6NIE9 313 aa7.53□□□□□ -1.2
DDX41-219ENST00000629036 SIVA1O15304 175 aa7.53□□□□□ -1.2
DDX41-219ENST00000629036 SRP19P09132 144 aaKnown RBP7.53□□□□□ -1.2
DDX41-219ENST00000629036 DNAH10OSP0CZ25 163 aa7.53□□□□□ -1.2
DDX41-219ENST00000629036 CTRLP40313 264 aa7.53□□□□□ -1.2
DDX41-219ENST00000629036 TNP2Q05952 138 aa7.53□□□□□ -1.2
DDX41-219ENST00000629036 NUDT10Q8NFP7 164 aa7.53□□□□□ -1.2
DDX41-219ENST00000629036 OR2D3Q8NGH3 330 aa7.53□□□□□ -1.2
DDX41-219ENST00000629036 NUDT11Q96G61 164 aa7.53□□□□□ -1.2
DDX41-219ENST00000629036 CNFNQ9BYD5 112 aa7.53□□□□□ -1.2
DDX41-219ENST00000629036 APOBP04114 4563 aaKnown RBP7.52□□□□□ -1.2
DDX41-219ENST00000629036 SRSF3P84103 164 aaKnown RBP7.52□□□□□ -1.21
DDX41-219ENST00000629036 TTC32Q5I0X7 151 aa7.52□□□□□ -1.21
DDX41-219ENST00000629036 FAM74A4Q5TZK3 123 aa7.52□□□□□ -1.21
DDX41-219ENST00000629036 SH2D6Q7Z4S9 175 aa7.52□□□□□ -1.21
DDX41-219ENST00000629036 PRADC1Q9BSG0 188 aa7.52□□□□□ -1.21
DDX41-219ENST00000629036 RNASE7Q9H1E1 156 aaKnown RBP7.52□□□□□ -1.21
DDX41-219ENST00000629036 MSRB1Q9NZV6 116 aa7.52□□□□□ -1.21
DDX41-219ENST00000629036 P01737 135 aa7.51□□□□□ -1.21
DDX41-219ENST00000629036 Q8N3U1 123 aa7.51□□□□□ -1.21
DDX41-219ENST00000629036 FER1L6-AS1Q8NA97 138 aa7.51□□□□□ -1.21
DDX41-219ENST00000629036 OR10G8Q8NGN5 311 aa7.51□□□□□ -1.21
DDX41-219ENST00000629036 GTSF1Q8WW33 167 aa7.51□□□□□ -1.21
DDX41-219ENST00000629036 LY96Q9Y6Y9 160 aa7.51□□□□□ -1.21
DDX41-219ENST00000629036 GAGE12JA6NER3 117 aa7.5□□□□□ -1.21
DDX41-219ENST00000629036 BTF3P20290 206 aaKnown RBP7.5□□□□□ -1.21
DDX41-219ENST00000629036 RPS20P60866 119 aaKnown RBP7.5□□□□□ -1.21
DDX41-219ENST00000629036 GAGE1Q13065 139 aa7.5□□□□□ -1.21
DDX41-219ENST00000629036 GAGE4Q13068 117 aa7.5□□□□□ -1.21
DDX41-219ENST00000629036 GAGE5Q13069 117 aa7.5□□□□□ -1.21
DDX41-219ENST00000629036 GAGE13Q4V321 117 aa7.5□□□□□ -1.21
DDX41-219ENST00000629036 LELP1Q5T871 98 aa7.5□□□□□ -1.21
DDX41-219ENST00000629036 FAM231DQ6ZW35 169 aa7.5□□□□□ -1.21
DDX41-219ENST00000629036 LINC01551Q86U37 167 aa7.5□□□□□ -1.21
DDX41-219ENST00000629036 ATP6V0E2Q8NHE4 81 aa7.5□□□□□ -1.21
DDX41-219ENST00000629036 GTSF1LQ9H1H1 148 aa7.5□□□□□ -1.21
DDX41-219ENST00000629036 RPP21Q9H633 154 aaKnown RBP7.5□□□□□ -1.21
DDX41-219ENST00000629036 TNFRSF18Q9Y5U5 241 aa7.5□□□□□ -1.21
DDX41-219ENST00000629036 TRBV10-1A0A0K0K1A3 114 aa7.49□□□□□ -1.21
DDX41-219ENST00000629036 RAB4BP61018 213 aa7.49□□□□□ -1.21
DDX41-219ENST00000629036 UBE2D3P61077 147 aa7.49□□□□□ -1.21
DDX41-219ENST00000629036 UBE2D2P62837 147 aa7.49□□□□□ -1.21
DDX41-219ENST00000629036 LINC01556Q5JQF7 62 aa7.49□□□□□ -1.21
DDX41-219ENST00000629036 LYZL1Q6UWQ5 148 aa7.49□□□□□ -1.21
DDX41-219ENST00000629036 MAPKAPK5-AS1Q8N8E1 139 aa7.49□□□□□ -1.21
DDX41-219ENST00000629036 NEXN-AS1Q8NBZ9 246 aa7.49□□□□□ -1.21
DDX41-219ENST00000629036 SMIM7Q9BQ49 75 aa7.49□□□□□ -1.21
DDX41-219ENST00000629036 BIN3Q9NQY0 253 aa7.49□□□□□ -1.21
DDX41-219ENST00000629036 SPANXN1Q5VSR9 72 aa7.48□□□□□ -1.21
DDX41-219ENST00000629036 DAZAP1Q96EP5 407 aaKnown RBP7.48□□□□□ -1.21
DDX41-219ENST00000629036 AP1S3Q96PC3 154 aa7.48□□□□□ -1.21
DDX41-219ENST00000629036 EIF5A2Q9GZV4 153 aaKnown RBP7.48□□□□□ -1.21
DDX41-219ENST00000629036 IGHV3-38A0A0C4DH36 116 aa7.47□□□□□ -1.21
DDX41-219ENST00000629036 F2Z2F3 143 aa7.47□□□□□ -1.21
DDX41-219ENST00000629036 CT83Q5H943 113 aa7.47□□□□□ -1.21
DDX41-219ENST00000629036 SOHLH1Q5JUK2 328 aa7.47□□□□□ -1.21
DDX41-219ENST00000629036 WDR73Q6P4I2 378 aa7.47□□□□□ -1.21
DDX41-219ENST00000629036 TRBV7-3A0A075B6L6 115 aa7.46□□□□□ -1.22
DDX41-219ENST00000629036 K7EP13 123 aa7.46□□□□□ -1.22
DDX41-219ENST00000629036 M0QY20 66 aa7.46□□□□□ -1.22
DDX41-219ENST00000629036 EVI2AP22794 236 aa7.46□□□□□ -1.22
DDX41-219ENST00000629036 CEBPGP53567 150 aa7.46□□□□□ -1.22
DDX41-219ENST00000629036 FOXA3P55318 350 aaPredicted RBP7.46□□□□□ -1.22
DDX41-219ENST00000629036 SSTP61278 116 aa7.46□□□□□ -1.22
DDX41-219ENST00000629036 CACNG7P62955 275 aa7.46□□□□□ -1.22
DDX41-219ENST00000629036 IFITM2Q01629 132 aa7.46□□□□□ -1.22
DDX41-219ENST00000629036 ZNF56Q15929 161 aa7.46□□□□□ -1.22
DDX41-219ENST00000629036 TPPP3Q9BW30 176 aa7.46□□□□□ -1.22
DDX41-219ENST00000629036 XKRY2A2RUG3 117 aa7.45□□□□□ -1.22
DDX41-219ENST00000629036 ZNF727A8MUV8 499 aa7.45□□□□□ -1.22
DDX41-219ENST00000629036 NTF3P20783 257 aa7.45□□□□□ -1.22
DDX41-219ENST00000629036 RPL23P62829 140 aaKnown RBP7.45□□□□□ -1.22
DDX41-219ENST00000629036 SUMO4Q6EEV6 95 aa7.45□□□□□ -1.22
DDX41-219ENST00000629036 ISOC2Q96AB3 205 aa7.45□□□□□ -1.22
DDX41-219ENST00000629036 V9GYV3 84 aa7.45□□□□□ -1.22
DDX41-219ENST00000629036 DMBT1Q9UGM3 2413 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms