RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 APOC3P02656 99 aa6.95□□□□□ -1.3
SOX2-OT-249ENST00000628810 ATP5G1P05496 136 aa6.95□□□□□ -1.3
SOX2-OT-249ENST00000628810 SPANXN1Q5VSR9 72 aa6.95□□□□□ -1.3
SOX2-OT-249ENST00000628810 CFAP126Q5VTH2 177 aa6.95□□□□□ -1.3
SOX2-OT-249ENST00000628810 UFSP1Q6NVU6 142 aa6.95□□□□□ -1.3
SOX2-OT-249ENST00000628810 TPPP3Q9BW30 176 aa6.95□□□□□ -1.3
SOX2-OT-249ENST00000628810 TMEM242Q9NWH2 141 aa6.95□□□□□ -1.3
SOX2-OT-249ENST00000628810 NAT8BQ9UHF3 227 aa6.95□□□□□ -1.3
SOX2-OT-249ENST00000628810 TRAV10A0A0B4J240 114 aa6.94□□□□□ -1.3
SOX2-OT-249ENST00000628810 C7orf77A4D0Y5 90 aa6.94□□□□□ -1.3
SOX2-OT-249ENST00000628810 M0R381 172 aa6.94□□□□□ -1.3
SOX2-OT-249ENST00000628810 SNAPINO95295 136 aa6.94□□□□□ -1.3
SOX2-OT-249ENST00000628810 ZFP2Q6ZN57 461 aa6.94□□□□□ -1.3
SOX2-OT-249ENST00000628810 NUP35Q8NFH5 326 aa6.94□□□□□ -1.3
SOX2-OT-249ENST00000628810 AP1S3Q96PC3 154 aa6.94□□□□□ -1.3
SOX2-OT-249ENST00000628810 IMMP2LQ96T52 175 aa6.94□□□□□ -1.3
SOX2-OT-249ENST00000628810 A0A1B0GUT8 65 aa6.93□□□□□ -1.3
SOX2-OT-249ENST00000628810 RHODO00212 210 aa6.93□□□□□ -1.3
SOX2-OT-249ENST00000628810 HOXA5P20719 270 aa6.93□□□□□ -1.3
SOX2-OT-249ENST00000628810 OR4C5Q8NGB2 326 aa6.93□□□□□ -1.3
SOX2-OT-249ENST00000628810 MUC7Q8TAX7 377 aa6.93□□□□□ -1.3
SOX2-OT-249ENST00000628810 PHLDA1Q8WV24 401 aaPredicted RBP6.93□□□□□ -1.3
SOX2-OT-249ENST00000628810 ZNF479Q96JC4 524 aa6.93□□□□□ -1.3
SOX2-OT-249ENST00000628810 PGLYRP4Q96LB8 373 aa6.93□□□□□ -1.3
SOX2-OT-249ENST00000628810 KIF25-AS1Q9Y6Z4 181 aa6.93□□□□□ -1.3
SOX2-OT-249ENST00000628810 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.93□□□□□ -1.3
SOX2-OT-249ENST00000628810 DEFB131BA0A096LNP1 70 aa6.92□□□□□ -1.3
SOX2-OT-249ENST00000628810 MUC21A0A0G2JKD1 596 aa6.92□□□□□ -1.3
SOX2-OT-249ENST00000628810 MUC21A0A140T8X8 626 aa6.92□□□□□ -1.3
SOX2-OT-249ENST00000628810 NUPR2A6NF83 97 aa6.92□□□□□ -1.3
SOX2-OT-249ENST00000628810 CRYGDP07320 174 aa6.92□□□□□ -1.3
SOX2-OT-249ENST00000628810 TRGC1P0CF51 173 aa6.92□□□□□ -1.3
SOX2-OT-249ENST00000628810 NTF3P20783 257 aa6.92□□□□□ -1.3
SOX2-OT-249ENST00000628810 FHL2Q14192 279 aa6.92□□□□□ -1.3
SOX2-OT-249ENST00000628810 BORCS7Q96B45 105 aa6.92□□□□□ -1.3
SOX2-OT-249ENST00000628810 FAM210BQ96KR6 192 aa6.92□□□□□ -1.3
SOX2-OT-249ENST00000628810 JPT2Q9H910 190 aa6.92□□□□□ -1.3
SOX2-OT-249ENST00000628810 STARD9Q9P2P6 4700 aa6.92□□□□□ -1.3
SOX2-OT-249ENST00000628810 TRAV9-1A0A075B6T8 112 aa6.91□□□□□ -1.3
SOX2-OT-249ENST00000628810 A0A1B0GW15 77 aa6.91□□□□□ -1.3
SOX2-OT-249ENST00000628810 A0A1B0GXF2 115 aa6.91□□□□□ -1.3
SOX2-OT-249ENST00000628810 H3BNG1 76 aa6.91□□□□□ -1.3
SOX2-OT-249ENST00000628810 GATA1P15976 413 aaPredicted RBP6.91□□□□□ -1.3
SOX2-OT-249ENST00000628810 LINC00315P59091 139 aa6.91□□□□□ -1.3
SOX2-OT-249ENST00000628810 SLAQ13239 276 aa6.91□□□□□ -1.3
SOX2-OT-249ENST00000628810 RIGQ13278 110 aa6.91□□□□□ -1.3
SOX2-OT-249ENST00000628810 CEMP1Q6PRD7 247 aaPredicted RBP6.91□□□□□ -1.3
SOX2-OT-249ENST00000628810 ATP5L2Q7Z4Y8 100 aa6.91□□□□□ -1.3
SOX2-OT-249ENST00000628810 GATD1Q8NB37 220 aa6.91□□□□□ -1.3
SOX2-OT-249ENST00000628810 SAMD10Q9BYL1 202 aa6.91□□□□□ -1.3
SOX2-OT-249ENST00000628810 RPS10P5Q9NQ39 176 aa6.91□□□□□ -1.3
SOX2-OT-249ENST00000628810 MSRB1Q9NZV6 116 aa6.91□□□□□ -1.3
SOX2-OT-249ENST00000628810 NACAE9PAV3 2078 aa6.9□□□□□ -1.3
SOX2-OT-249ENST00000628810 TRBV6-4A0A1B0GX49 114 aa6.9□□□□□ -1.3
SOX2-OT-249ENST00000628810 F5H768 121 aa6.9□□□□□ -1.3
SOX2-OT-249ENST00000628810 C3orf84H3BNL1 204 aa6.9□□□□□ -1.3
SOX2-OT-249ENST00000628810 IGHV3-53P01767 116 aa6.9□□□□□ -1.3
SOX2-OT-249ENST00000628810 FAM3BP58499 235 aaPredicted RBP6.9□□□□□ -1.3
SOX2-OT-249ENST00000628810 TWIST1Q15672 202 aa6.9□□□□□ -1.3
SOX2-OT-249ENST00000628810 KCNIP4Q6PIL6 250 aa6.9□□□□□ -1.3
SOX2-OT-249ENST00000628810 C14orf178Q8N769 122 aaPredicted RBP6.9□□□□□ -1.3
SOX2-OT-249ENST00000628810 TMEM191AQ9H0A3 160 aa6.9□□□□□ -1.3
SOX2-OT-249ENST00000628810 DPH3P1Q9H4G8 78 aa6.9□□□□□ -1.3
SOX2-OT-249ENST00000628810 PRO0255Q9UI72 69 aa6.9□□□□□ -1.3
SOX2-OT-249ENST00000628810 A0A087WWL8 130 aa6.89□□□□□ -1.31
SOX2-OT-249ENST00000628810 TRGV4A0A0C4DH28 118 aa6.89□□□□□ -1.31
SOX2-OT-249ENST00000628810 HTN3P15516 51 aa6.89□□□□□ -1.31
SOX2-OT-249ENST00000628810 EVI2AP22794 236 aa6.89□□□□□ -1.31
SOX2-OT-249ENST00000628810 CRYBA4P53673 196 aa6.89□□□□□ -1.31
SOX2-OT-249ENST00000628810 HBBP68871 147 aa6.89□□□□□ -1.31
SOX2-OT-249ENST00000628810 FAM74A4Q5TZK3 123 aa6.89□□□□□ -1.31
SOX2-OT-249ENST00000628810 ATRAIDQ6UW56 229 aa6.89□□□□□ -1.31
SOX2-OT-249ENST00000628810 BTF3L4Q96K17 158 aa6.89□□□□□ -1.31
SOX2-OT-249ENST00000628810 HHLA3Q9XRX5 114 aa6.89□□□□□ -1.31
SOX2-OT-249ENST00000628810 TRAV26-1A0A087WT03 109 aa6.88□□□□□ -1.31
SOX2-OT-249ENST00000628810 K7EQD1 137 aa6.88□□□□□ -1.31
SOX2-OT-249ENST00000628810 S100A8P05109 93 aa6.88□□□□□ -1.31
SOX2-OT-249ENST00000628810 SMIM17P0DL12 118 aa6.88□□□□□ -1.31
SOX2-OT-249ENST00000628810 S100PP25815 95 aa6.88□□□□□ -1.31
SOX2-OT-249ENST00000628810 TCTAP57738 103 aa6.88□□□□□ -1.31
SOX2-OT-249ENST00000628810 RAB4BP61018 213 aa6.88□□□□□ -1.31
SOX2-OT-249ENST00000628810 SSTP61278 116 aa6.88□□□□□ -1.31
SOX2-OT-249ENST00000628810 RHOHQ15669 191 aa6.88□□□□□ -1.31
SOX2-OT-249ENST00000628810 MRPL54Q6P161 138 aaKnown RBP6.88□□□□□ -1.31
SOX2-OT-249ENST00000628810 TMEM88Q6PEY1 159 aa6.88□□□□□ -1.31
SOX2-OT-249ENST00000628810 RASL11AQ6T310 242 aa6.88□□□□□ -1.31
SOX2-OT-249ENST00000628810 Q6ZSN1 163 aa6.88□□□□□ -1.31
SOX2-OT-249ENST00000628810 SMIM15Q7Z3B0 74 aa6.88□□□□□ -1.31
SOX2-OT-249ENST00000628810 SLC25A29Q8N8R3 303 aa6.88□□□□□ -1.31
SOX2-OT-249ENST00000628810 FRZBQ92765 325 aa6.88□□□□□ -1.31
SOX2-OT-249ENST00000628810 VSIG2Q96IQ7 327 aa6.88□□□□□ -1.31
SOX2-OT-249ENST00000628810 KLK5Q9Y337 293 aaPredicted RBP6.88□□□□□ -1.31
SOX2-OT-249ENST00000628810 IGHV3-73A0A0B4J1V6 119 aa6.87□□□□□ -1.31
SOX2-OT-249ENST00000628810 LINC00694P0DN24 101 aa6.87□□□□□ -1.31
SOX2-OT-249ENST00000628810 ZNF56Q15929 161 aa6.87□□□□□ -1.31
SOX2-OT-249ENST00000628810 CASC10Q5T4H9 136 aa6.87□□□□□ -1.31
SOX2-OT-249ENST00000628810 C15orf53Q8NAA6 179 aa6.87□□□□□ -1.31
SOX2-OT-249ENST00000628810 YPEL4Q96NS1 127 aa6.87□□□□□ -1.31
SOX2-OT-249ENST00000628810 TRBV10-1A0A0K0K1A3 114 aa6.86□□□□□ -1.31
SOX2-OT-249ENST00000628810 ATP6V1G1O75348 118 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms