RNA–Protein interactions for RNA: ENST00000627179.1

LINC01338-201, Transcript of long intergenic non-protein coding RNA 1338, humanhuman

TSL 3 BASIC

Gene LINC01338, Length 632 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01338-201ENST00000627179 Q0VG73 95 aa3.84□□□□□ -1.79
LINC01338-201ENST00000627179 SLAQ13239 276 aa3.84□□□□□ -1.79
LINC01338-201ENST00000627179 KIAA1644Q3SXP7 199 aa3.84□□□□□ -1.79
LINC01338-201ENST00000627179 COA6Q5JTJ3 125 aaKnown RBP3.84□□□□□ -1.79
LINC01338-201ENST00000627179 PRR9Q5T870 116 aa3.84□□□□□ -1.79
LINC01338-201ENST00000627179 GDF5OSQ5U4N7 250 aa3.84□□□□□ -1.79
LINC01338-201ENST00000627179 FAM159AQ6UWV7 190 aa3.84□□□□□ -1.79
LINC01338-201ENST00000627179 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.84□□□□□ -1.79
LINC01338-201ENST00000627179 GATD1Q8NB37 220 aa3.84□□□□□ -1.79
LINC01338-201ENST00000627179 HLA-DRB4X5D2U9 266 aa3.84□□□□□ -1.79
LINC01338-201ENST00000627179 TEX15Q9BXT5 2789 aa3.84□□□□□ -1.8
LINC01338-201ENST00000627179 LOC102724200A0A096LPH7 203 aaPredicted RBP3.83□□□□□ -1.8
LINC01338-201ENST00000627179 TRAV12-3A0A0B4J271 114 aa3.83□□□□□ -1.8
LINC01338-201ENST00000627179 H3BMM0 161 aa3.83□□□□□ -1.8
LINC01338-201ENST00000627179 H3BVH4 76 aa3.83□□□□□ -1.8
LINC01338-201ENST00000627179 M0R2Z0 102 aa3.83□□□□□ -1.8
LINC01338-201ENST00000627179 SNAI2O43623 268 aa3.83□□□□□ -1.8
LINC01338-201ENST00000627179 OR5AL1P0C617 328 aa3.83□□□□□ -1.8
LINC01338-201ENST00000627179 NTF3P20783 257 aa3.83□□□□□ -1.8
LINC01338-201ENST00000627179 SSTP61278 116 aa3.83□□□□□ -1.8
LINC01338-201ENST00000627179 SPINK13Q1W4C9 94 aa3.83□□□□□ -1.8
LINC01338-201ENST00000627179 PDZD11Q5EBL8 140 aa3.83□□□□□ -1.8
LINC01338-201ENST00000627179 MUC21Q5SSG8 566 aa3.83□□□□□ -1.8
LINC01338-201ENST00000627179 SPANXN1Q5VSR9 72 aa3.83□□□□□ -1.8
LINC01338-201ENST00000627179 ZNF493Q6ZR52 646 aa3.83□□□□□ -1.8
LINC01338-201ENST00000627179 NOTCH2NLQ7Z3S9 236 aa3.83□□□□□ -1.8
LINC01338-201ENST00000627179 STHQ8IWL8 128 aa3.83□□□□□ -1.8
LINC01338-201ENST00000627179 HIST3H2BBQ8N257 126 aa3.83□□□□□ -1.8
LINC01338-201ENST00000627179 STPG4Q8N801 248 aa3.83□□□□□ -1.8
LINC01338-201ENST00000627179 TIMM8BQ9Y5J9 83 aaPredicted RBP3.83□□□□□ -1.8
LINC01338-201ENST00000627179 SONP18583 2426 aaKnown RBP3.83□□□□□ -1.8
LINC01338-201ENST00000627179 MYO9AB2RTY4 2548 aa3.83□□□□□ -1.8
LINC01338-201ENST00000627179 ZANQ9Y493 2812 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 TRAV12-2A0A075B6T6 113 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 IGHV1OR15-1A0A075B7D0 117 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 MUC21A0A0G2JKD1 596 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 MUC21A0A140T8X8 626 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 A8MTW9 85 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 IGLV1-51P01701 117 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 CD7P09564 240 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 FABP4P15090 132 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 INSL3P51460 131 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 NUTF2P61970 127 aaKnown RBP3.82□□□□□ -1.8
LINC01338-201ENST00000627179 DNLZQ5SXM8 178 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 C9orf66Q5T8R8 295 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 FAM104BQ5XKR9 115 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 AMTNQ6UX39 209 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 C18orf32Q8TCD1 76 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 C20orf144Q9BQM9 153 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 ALKBH7Q9BT30 221 aaPredicted RBP3.82□□□□□ -1.8
LINC01338-201ENST00000627179 MCRIP2Q9BUT9 160 aaKnown RBP3.82□□□□□ -1.8
LINC01338-201ENST00000627179 CNFNQ9BYD5 112 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 SAMD10Q9BYL1 202 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 TMEM191AQ9H0A3 160 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 ZNF256Q9Y2P7 627 aaPredicted RBP3.82□□□□□ -1.8
LINC01338-201ENST00000627179 PHLDA3Q9Y5J5 127 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 ITPR2Q14571 2701 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 TLN2Q9Y4G6 2542 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 CSMD2Q7Z408 3487 aa3.82□□□□□ -1.8
LINC01338-201ENST00000627179 ACANP16112 2415 aa3.81□□□□□ -1.8
LINC01338-201ENST00000627179 IGHV4-4A0A075B6R2 117 aa3.81□□□□□ -1.8
LINC01338-201ENST00000627179 M0R381 172 aa3.81□□□□□ -1.8
LINC01338-201ENST00000627179 HSBP1O75506 76 aa3.81□□□□□ -1.8
LINC01338-201ENST00000627179 SERF1AO75920 110 aa3.81□□□□□ -1.8
LINC01338-201ENST00000627179 INSP01308 110 aa3.81□□□□□ -1.8
LINC01338-201ENST00000627179 PPBPP02775 128 aa3.81□□□□□ -1.8
LINC01338-201ENST00000627179 SMIM6P0DI80 62 aa3.81□□□□□ -1.8
LINC01338-201ENST00000627179 ESDP10768 282 aa3.81□□□□□ -1.8
LINC01338-201ENST00000627179 CKS2P33552 79 aa3.81□□□□□ -1.8
LINC01338-201ENST00000627179 FXYD7P58549 80 aa3.81□□□□□ -1.8
LINC01338-201ENST00000627179 TDRG1Q3Y452 100 aa3.81□□□□□ -1.8
LINC01338-201ENST00000627179 RNASEKQ6P5S7 137 aaKnown RBP3.81□□□□□ -1.8
LINC01338-201ENST00000627179 Q6ZQT7 251 aa3.81□□□□□ -1.8
LINC01338-201ENST00000627179 AMN1Q8IY45 258 aa3.81□□□□□ -1.8
LINC01338-201ENST00000627179 ORMDL3Q8N138 153 aa3.81□□□□□ -1.8
LINC01338-201ENST00000627179 TMEM256Q8N2U0 113 aa3.81□□□□□ -1.8
LINC01338-201ENST00000627179 OR10D4PQ8NGN7 298 aa3.81□□□□□ -1.8
LINC01338-201ENST00000627179 OR10AG1Q8NH19 301 aa3.81□□□□□ -1.8
LINC01338-201ENST00000627179 PACRGQ96M98 296 aaPredicted RBP3.81□□□□□ -1.8
LINC01338-201ENST00000627179 PRELID3AQ96N28 172 aa3.81□□□□□ -1.8
LINC01338-201ENST00000627179 AP1S3Q96PC3 154 aa3.81□□□□□ -1.8
LINC01338-201ENST00000627179 HIST1H2BLQ99880 126 aa3.81□□□□□ -1.8
LINC01338-201ENST00000627179 CITED1Q99966 193 aa3.81□□□□□ -1.8
LINC01338-201ENST00000627179 MAP1AP78559 2803 aaPredicted RBP3.8□□□□□ -1.8
LINC01338-201ENST00000627179 IGHV3-16A0A0C4DH30 117 aa3.8□□□□□ -1.8
LINC01338-201ENST00000627179 RBMY1BA6NDE4 496 aaKnown RBP3.8□□□□□ -1.8
LINC01338-201ENST00000627179 RBMY1EA6NEQ0 496 aaKnown RBP3.8□□□□□ -1.8
LINC01338-201ENST00000627179 D6R8Y8 96 aa3.8□□□□□ -1.8
LINC01338-201ENST00000627179 GNRH2O43555 120 aa3.8□□□□□ -1.8
LINC01338-201ENST00000627179 ZNF324O75467 553 aaPredicted RBP3.8□□□□□ -1.8
LINC01338-201ENST00000627179 RBMY1DP0C7P1 496 aaKnown RBP3.8□□□□□ -1.8
LINC01338-201ENST00000627179 SMIM17P0DL12 118 aa3.8□□□□□ -1.8
LINC01338-201ENST00000627179 RNASE3P12724 160 aaKnown RBP3.8□□□□□ -1.8
LINC01338-201ENST00000627179 PMCHP20382 165 aa3.8□□□□□ -1.8
LINC01338-201ENST00000627179 ZNF415Q09FC8 603 aa3.8□□□□□ -1.8
LINC01338-201ENST00000627179 IQCJQ1A5X6 159 aa3.8□□□□□ -1.8
LINC01338-201ENST00000627179 MRPL51Q4U2R6 128 aaKnown RBP3.8□□□□□ -1.8
LINC01338-201ENST00000627179 FA2HQ7L5A8 372 aa3.8□□□□□ -1.8
LINC01338-201ENST00000627179 TRPT1Q86TN4 253 aaKnown RBP3.8□□□□□ -1.8
LINC01338-201ENST00000627179 GTSCR1Q86UQ5 136 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms