RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 HLA-DRB4X5D2U9 266 aa14.51□□□□□ -0.09
CHRNA4-209ENST00000627000 HIVEP2P31629 2446 aa14.51□□□□□ -0.09
CHRNA4-209ENST00000627000 H3BMM0 161 aa14.51□□□□□ -0.09
CHRNA4-209ENST00000627000 AP1S3Q96PC3 154 aa14.51□□□□□ -0.09
CHRNA4-209ENST00000627000 IGHV1OR15-1A0A075B7D0 117 aa14.5□□□□□ -0.09
CHRNA4-209ENST00000627000 HINT1P49773 126 aaPredicted RBP14.5□□□□□ -0.09
CHRNA4-209ENST00000627000 LINC01545Q5VT33 79 aa14.5□□□□□ -0.09
CHRNA4-209ENST00000627000 NOTCH2Q04721 2471 aa14.5□□□□□ -0.09
CHRNA4-209ENST00000627000 hDV102S1A0JD36 115 aa14.5□□□□□ -0.09
CHRNA4-209ENST00000627000 RASL10AQ92737 203 aa14.5□□□□□ -0.09
CHRNA4-209ENST00000627000 RPL39LQ96EH5 51 aaKnown RBP14.5□□□□□ -0.09
CHRNA4-209ENST00000627000 PRSS47A8MTI9 375 aa14.49□□□□□ -0.09
CHRNA4-209ENST00000627000 C9orf85Q96MD7 179 aa14.49□□□□□ -0.09
CHRNA4-209ENST00000627000 ST20Q9HBF5 79 aa14.49□□□□□ -0.09
CHRNA4-209ENST00000627000 ZNF256Q9Y2P7 627 aaPredicted RBP14.49□□□□□ -0.09
CHRNA4-209ENST00000627000 KIF25-AS1Q9Y6Z4 181 aa14.49□□□□□ -0.09
CHRNA4-209ENST00000627000 A8MTW9 85 aa14.48□□□□□ -0.09
CHRNA4-209ENST00000627000 FCER1GP30273 86 aa14.48□□□□□ -0.09
CHRNA4-209ENST00000627000 LINC00315P59091 139 aa14.48□□□□□ -0.09
CHRNA4-209ENST00000627000 C18orf15Q96N68 181 aa14.48□□□□□ -0.09
CHRNA4-209ENST00000627000 DEFB125Q8N687 156 aa14.47□□□□□ -0.09
CHRNA4-209ENST00000627000 TMEM158Q8WZ71 300 aa14.47□□□□□ -0.09
CHRNA4-209ENST00000627000 OTOGQ6ZRI0 2925 aa14.47□□□□□ -0.09
CHRNA4-209ENST00000627000 K7EP13 123 aa14.47□□□□□ -0.09
CHRNA4-209ENST00000627000 IFI27L1Q96BM0 104 aa14.47□□□□□ -0.09
CHRNA4-209ENST00000627000 SPAG8Q99932 426 aaPredicted RBP14.47□□□□□ -0.09
CHRNA4-209ENST00000627000 A0A087WWL8 130 aa14.46□□□□□ -0.09
CHRNA4-209ENST00000627000 CCL25O15444 150 aa14.46□□□□□ -0.09
CHRNA4-209ENST00000627000 HSBP1L1C9JCN9 74 aa14.46□□□□□ -0.1
CHRNA4-209ENST00000627000 PROK1P58294 105 aa14.45□□□□□ -0.1
CHRNA4-209ENST00000627000 SMIM2Q9BVW6 85 aa14.45□□□□□ -0.1
CHRNA4-209ENST00000627000 PRM2P04554 102 aa14.44□□□□□ -0.1
CHRNA4-209ENST00000627000 HTN1P15515 57 aa14.44□□□□□ -0.1
CHRNA4-209ENST00000627000 SUMO2P61956 95 aaKnown RBP14.44□□□□□ -0.1
CHRNA4-209ENST00000627000 ODF3L2Q3SX64 289 aa14.44□□□□□ -0.1
CHRNA4-209ENST00000627000 POM121L12Q8N7R1 296 aa14.44□□□□□ -0.1
CHRNA4-209ENST00000627000 ADARB2-AS1A8MUL3 147 aa14.44□□□□□ -0.1
CHRNA4-209ENST00000627000 NDUFA7O95182 113 aa14.44□□□□□ -0.1
CHRNA4-209ENST00000627000 SMIM17P0DL12 118 aa14.44□□□□□ -0.1
CHRNA4-209ENST00000627000 LAGE3Q14657 143 aa14.44□□□□□ -0.1
CHRNA4-209ENST00000627000 TP73-AS1Q9UF72 201 aa14.44□□□□□ -0.1
CHRNA4-209ENST00000627000 CBY3A6NI87 242 aa14.43□□□□□ -0.1
CHRNA4-209ENST00000627000 NSUN5P1Q3KNT7 163 aa14.43□□□□□ -0.1
CHRNA4-209ENST00000627000 OR4C5Q8NGB2 326 aa14.43□□□□□ -0.1
CHRNA4-209ENST00000627000 SETXQ7Z333 2677 aaKnown RBP14.43□□□□□ -0.1
CHRNA4-209ENST00000627000 TRAV25A0A0B4J276 109 aa14.42□□□□□ -0.1
CHRNA4-209ENST00000627000 INAFM1C9JVW0 142 aa14.42□□□□□ -0.1
CHRNA4-209ENST00000627000 C21orf62-AS1Q17RA5 79 aa14.41□□□□□ -0.1
CHRNA4-209ENST00000627000 LGALS9BQ3B8N2 356 aa14.41□□□□□ -0.1
CHRNA4-209ENST00000627000 FAM74A4Q5TZK3 123 aa14.41□□□□□ -0.1
CHRNA4-209ENST00000627000 LGALS9CQ6DKI2 356 aa14.41□□□□□ -0.1
CHRNA4-209ENST00000627000 SUMO4Q6EEV6 95 aa14.41□□□□□ -0.1
CHRNA4-209ENST00000627000 C20orf78Q9BR46 151 aa14.41□□□□□ -0.1
CHRNA4-209ENST00000627000 KRTAP10-3P60369 221 aa14.41□□□□□ -0.1
CHRNA4-209ENST00000627000 C12orf54Q6X4T0 127 aa14.41□□□□□ -0.1
CHRNA4-209ENST00000627000 TRGV11A0A075B6L2 103 aa14.4□□□□□ -0.1
CHRNA4-209ENST00000627000 SLC25A34Q6PIV7 304 aa14.4□□□□□ -0.1
CHRNA4-209ENST00000627000 SYT8Q8NBV8 401 aa14.4□□□□□ -0.1
CHRNA4-209ENST00000627000 JMJD8Q96S16 334 aa14.4□□□□□ -0.1
CHRNA4-209ENST00000627000 F5H697 171 aa14.4□□□□□ -0.1
CHRNA4-209ENST00000627000 VAMP3Q15836 100 aa14.4□□□□□ -0.1
CHRNA4-209ENST00000627000 SAP30O75446 220 aa14.39□□□□□ -0.11
CHRNA4-209ENST00000627000 ZNF876PQ49A33 203 aa14.39□□□□□ -0.11
CHRNA4-209ENST00000627000 NEGR1Q7Z3B1 354 aa14.39□□□□□ -0.11
CHRNA4-209ENST00000627000 DKK2Q9UBU2 259 aa14.39□□□□□ -0.11
CHRNA4-209ENST00000627000 CRYGDP07320 174 aa14.39□□□□□ -0.11
CHRNA4-209ENST00000627000 RBX1P62877 108 aa14.39□□□□□ -0.11
CHRNA4-209ENST00000627000 NUDT3O95989 172 aa14.38□□□□□ -0.11
CHRNA4-209ENST00000627000 RNASE8Q8TDE3 154 aaKnown RBP14.38□□□□□ -0.11
CHRNA4-209ENST00000627000 CSTL1Q9H114 145 aa14.38□□□□□ -0.11
CHRNA4-209ENST00000627000 DEFB104AQ8WTQ1 72 aa14.37□□□□□ -0.11
CHRNA4-209ENST00000627000 ANKRD39Q53RE8 183 aa14.37□□□□□ -0.11
CHRNA4-209ENST00000627000 OR11H12B2RN74 326 aa14.36□□□□□ -0.11
CHRNA4-209ENST00000627000 PRSS1P07477 247 aa14.36□□□□□ -0.11
CHRNA4-209ENST00000627000 COTL1Q14019 142 aa14.36□□□□□ -0.11
CHRNA4-209ENST00000627000 NIPBLQ6KC79 2804 aaeCLIP14.36□□□□□ -0.11
CHRNA4-209ENST00000627000 ZNF56Q15929 161 aa14.36□□□□□ -0.11
CHRNA4-209ENST00000627000 PPP1R17O96001 155 aa14.35□□□□□ -0.11
CHRNA4-209ENST00000627000 ODF1Q14990 250 aa14.35□□□□□ -0.11
CHRNA4-209ENST00000627000 STHQ8IWL8 128 aa14.35□□□□□ -0.11
CHRNA4-209ENST00000627000 LINC01587Q99440 93 aa14.35□□□□□ -0.11
CHRNA4-209ENST00000627000 XCL2Q9UBD3 114 aa14.35□□□□□ -0.11
CHRNA4-209ENST00000627000 TCTAP57738 103 aa14.34□□□□□ -0.11
CHRNA4-209ENST00000627000 ORMDL2Q53FV1 153 aa14.34□□□□□ -0.11
CHRNA4-209ENST00000627000 INSP01308 110 aa14.34□□□□□ -0.11
CHRNA4-209ENST00000627000 MPV17L2Q567V2 206 aa14.34□□□□□ -0.11
CHRNA4-209ENST00000627000 MORN3Q6PF18 240 aaPredicted RBP14.34□□□□□ -0.11
CHRNA4-209ENST00000627000 ATP5LO75964 103 aa14.33□□□□□ -0.11
CHRNA4-209ENST00000627000 BVES-AS1Q5T3Y7 98 aa14.33□□□□□ -0.11
CHRNA4-209ENST00000627000 M0QY20 66 aa14.33□□□□□ -0.12
CHRNA4-209ENST00000627000 IGLV1-51P01701 117 aa14.33□□□□□ -0.12
CHRNA4-209ENST00000627000 POLR2KP53803 58 aaKnown RBP14.33□□□□□ -0.12
CHRNA4-209ENST00000627000 TRPT1Q86TN4 253 aaKnown RBP14.33□□□□□ -0.12
CHRNA4-209ENST00000627000 CLUHP3Q96NS8 147 aa14.32□□□□□ -0.12
CHRNA4-209ENST00000627000 WFDC10AQ9H1F0 79 aa14.32□□□□□ -0.12
CHRNA4-209ENST00000627000 FN1P02751 2386 aaKnown RBP14.32□□□□□ -0.12
CHRNA4-209ENST00000627000 Q6ZVH6 145 aa14.32□□□□□ -0.12
CHRNA4-209ENST00000627000 TOMM6Q96B49 74 aa14.32□□□□□ -0.12
CHRNA4-209ENST00000627000 SDHAF1A6NFY7 115 aa14.31□□□□□ -0.12
CHRNA4-209ENST00000627000 TAX1BP3O14907 124 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms