RNA–Protein interactions for RNA: ENST00000624193.1

ATRX-215, Transcript of ATRX, chromatin remodeler, human

TSL 4

Gene ATRX, Length 463 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRX-215	ENST00000624193	RAB19	A4D1S5	217 aa		10.24	□□□□□ -0.77
ATRX-215	ENST00000624193	IFNA1	P01562	189 aa		10.24	□□□□□ -0.77
ATRX-215	ENST00000624193	S100A9	P06702	114 aa	Known RBP	10.24	□□□□□ -0.77
ATRX-215	ENST00000624193	LINC01559	Q495D7	138 aa		10.24	□□□□□ -0.77
ATRX-215	ENST00000624193	CENPW	Q5EE01	88 aa		10.24	□□□□□ -0.77
ATRX-215	ENST00000624193	FAM162B	Q5T6X4	162 aa		10.24	□□□□□ -0.77
ATRX-215	ENST00000624193	BAGE2	Q86Y30	109 aa		10.24	□□□□□ -0.77
ATRX-215	ENST00000624193		Q9HAA7	133 aa		10.24	□□□□□ -0.77
ATRX-215	ENST00000624193	TRAV4	A0A0B4J268	109 aa		10.23	□□□□□ -0.77
ATRX-215	ENST00000624193		M0R036	132 aa		10.23	□□□□□ -0.77
ATRX-215	ENST00000624193		M0R2P5	195 aa		10.23	□□□□□ -0.77
ATRX-215	ENST00000624193	PDE6D	O43924	150 aa		10.23	□□□□□ -0.77
ATRX-215	ENST00000624193	PLA2G1B	P04054	148 aa	Known RBP	10.23	□□□□□ -0.77
ATRX-215	ENST00000624193	LINC01556	Q5JQF7	62 aa		10.23	□□□□□ -0.77
ATRX-215	ENST00000624193	OR4C5	Q8NGB2	326 aa		10.23	□□□□□ -0.77
ATRX-215	ENST00000624193	PGPEP1L	A6NFU8	196 aa		10.22	□□□□□ -0.77
ATRX-215	ENST00000624193	KRTAP29-1	A8MX34	341 aa	Predicted RBP	10.22	□□□□□ -0.77
ATRX-215	ENST00000624193	IBA57-AS1	B1ANH7	110 aa		10.22	□□□□□ -0.77
ATRX-215	ENST00000624193	RPL19	P84098	196 aa	Known RBP	10.22	□□□□□ -0.77
ATRX-215	ENST00000624193	ZNF506	Q5JVG8	444 aa		10.22	□□□□□ -0.77
ATRX-215	ENST00000624193	DNLZ	Q5SXM8	178 aa		10.22	□□□□□ -0.77
ATRX-215	ENST00000624193	SH2D6	Q7Z4S9	175 aa		10.22	□□□□□ -0.77
ATRX-215	ENST00000624193	GRIFIN	A4D1Z8	144 aa		10.21	□□□□□ -0.77
ATRX-215	ENST00000624193	RBFOX3	A6NFN3	312 aa		10.21	□□□□□ -0.77
ATRX-215	ENST00000624193		B4DEV8	164 aa		10.21	□□□□□ -0.77
ATRX-215	ENST00000624193	TAGLN2	P37802	199 aa	Known RBP	10.21	□□□□□ -0.77
ATRX-215	ENST00000624193	TIRAP	P58753	221 aa		10.21	□□□□□ -0.77
ATRX-215	ENST00000624193	LINC00528	Q8N1L1	170 aa		10.21	□□□□□ -0.77
ATRX-215	ENST00000624193	MED9	Q9NWA0	146 aa		10.21	□□□□□ -0.77
ATRX-215	ENST00000624193	TMSB15B	A0A087X1C1	80 aa		10.2	□□□□□ -0.78
ATRX-215	ENST00000624193	TOR2A	Q5JU69	321 aa		10.2	□□□□□ -0.78
ATRX-215	ENST00000624193	PTH2	Q96A98	100 aa		10.2	□□□□□ -0.78
ATRX-215	ENST00000624193	FAM210A	Q96ND0	272 aa		10.2	□□□□□ -0.78
ATRX-215	ENST00000624193	IL36B	Q9NZH7	164 aa		10.2	□□□□□ -0.78
ATRX-215	ENST00000624193	TRAV8-6	A0A0B4J262	113 aa		10.19	□□□□□ -0.78
ATRX-215	ENST00000624193	C19orf71	A6NCJ1	209 aa		10.19	□□□□□ -0.78
ATRX-215	ENST00000624193		H3BVH4	76 aa		10.19	□□□□□ -0.78
ATRX-215	ENST00000624193	IGHV3-30	P01768	117 aa		10.19	□□□□□ -0.78
ATRX-215	ENST00000624193	IGHV3-33	P01772	117 aa		10.19	□□□□□ -0.78
ATRX-215	ENST00000624193	IGHV3-30-3	P0DP02	117 aa		10.19	□□□□□ -0.78
ATRX-215	ENST00000624193	IGHV3-30-5	P0DP03	117 aa		10.19	□□□□□ -0.78
ATRX-215	ENST00000624193	GATA1	P15976	413 aa	Predicted RBP	10.19	□□□□□ -0.78
ATRX-215	ENST00000624193	ASIP	P42127	132 aa		10.19	□□□□□ -0.78
ATRX-215	ENST00000624193	ZNF876P	Q49A33	203 aa		10.19	□□□□□ -0.78
ATRX-215	ENST00000624193	OR10J3	Q5JRS4	329 aa		10.19	□□□□□ -0.78
ATRX-215	ENST00000624193	PRR27	Q6MZM9	219 aa		10.19	□□□□□ -0.78
ATRX-215	ENST00000624193	TMEM250	H0YL14	139 aa		10.18	□□□□□ -0.78
ATRX-215	ENST00000624193		K7EN84	100 aa		10.18	□□□□□ -0.78
ATRX-215	ENST00000624193	RS1	O15537	224 aa		10.18	□□□□□ -0.78
ATRX-215	ENST00000624193	ARMS2	P0C7Q2	107 aa		10.18	□□□□□ -0.78
ATRX-215	ENST00000624193	CFAP126	Q5VTH2	177 aa		10.18	□□□□□ -0.78
ATRX-215	ENST00000624193		Q6ZSA8	131 aa		10.18	□□□□□ -0.78
ATRX-215	ENST00000624193	DEFB104A	Q8WTQ1	72 aa		10.18	□□□□□ -0.78
ATRX-215	ENST00000624193	PARL	Q9H300	379 aa		10.18	□□□□□ -0.78
ATRX-215	ENST00000624193		C9JQL5	133 aa		10.17	□□□□□ -0.78
ATRX-215	ENST00000624193	GNG4	P50150	75 aa		10.17	□□□□□ -0.78
ATRX-215	ENST00000624193	SRSF3	P84103	164 aa	Known RBP	10.17	□□□□□ -0.78
ATRX-215	ENST00000624193	WFDC2	Q14508	124 aa		10.17	□□□□□ -0.78
ATRX-215	ENST00000624193	UFSP1	Q6NVU6	142 aa		10.17	□□□□□ -0.78
ATRX-215	ENST00000624193	SMIM12	Q96EX1	92 aa		10.17	□□□□□ -0.78
ATRX-215	ENST00000624193	JPT2	Q9H910	190 aa		10.17	□□□□□ -0.78
ATRX-215	ENST00000624193	SRP19	P09132	144 aa	Known RBP	10.16	□□□□□ -0.78
ATRX-215	ENST00000624193	CXCL1	P09341	107 aa		10.16	□□□□□ -0.78
ATRX-215	ENST00000624193	DMRTA1	Q5VZB9	504 aa		10.16	□□□□□ -0.78
ATRX-215	ENST00000624193	MGST1	P10620	155 aa	Known RBP	10.15	□□□□□ -0.78
ATRX-215	ENST00000624193	S100A4	P26447	101 aa	Known RBP	10.15	□□□□□ -0.78
ATRX-215	ENST00000624193	LAGE3	Q14657	143 aa		10.15	□□□□□ -0.78
ATRX-215	ENST00000624193	LELP1	Q5T871	98 aa		10.15	□□□□□ -0.78
ATRX-215	ENST00000624193	SLC25A29	Q8N8R3	303 aa		10.15	□□□□□ -0.78
ATRX-215	ENST00000624193	OCC1	Q8TAD7	63 aa		10.15	□□□□□ -0.78
ATRX-215	ENST00000624193	SSBP4	Q9BWG4	385 aa	Predicted RBP	10.15	□□□□□ -0.78
ATRX-215	ENST00000624193	TM2D2	Q9BX73	214 aa		10.15	□□□□□ -0.78
ATRX-215	ENST00000624193	SAMD10	Q9BYL1	202 aa		10.15	□□□□□ -0.78
ATRX-215	ENST00000624193	LECT2	O14960	151 aa		10.14	□□□□□ -0.79
ATRX-215	ENST00000624193	SNAI2	O43623	268 aa		10.14	□□□□□ -0.79
ATRX-215	ENST00000624193	NDUFS6	O75380	124 aa	Known RBP	10.14	□□□□□ -0.79
ATRX-215	ENST00000624193	GZMB	P10144	247 aa		10.14	□□□□□ -0.79
ATRX-215	ENST00000624193	IFITM2	Q01629	132 aa		10.14	□□□□□ -0.79
ATRX-215	ENST00000624193	PIK3CD-AS1	Q5SR53	167 aa		10.14	□□□□□ -0.79
ATRX-215	ENST00000624193	SERTAD4-AS1	Q5TG53	156 aa		10.14	□□□□□ -0.79
ATRX-215	ENST00000624193	SYT8	Q8NBV8	401 aa		10.14	□□□□□ -0.79
ATRX-215	ENST00000624193	OR10AG1	Q8NH19	301 aa		10.14	□□□□□ -0.79
ATRX-215	ENST00000624193	PRADC1	Q9BSG0	188 aa		10.14	□□□□□ -0.79
ATRX-215	ENST00000624193	EIF5A2	Q9GZV4	153 aa	Known RBP	10.14	□□□□□ -0.79
ATRX-215	ENST00000624193	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	10.13	□□□□□ -0.79
ATRX-215	ENST00000624193	IGLC6	P0CF74	106 aa		10.13	□□□□□ -0.79
ATRX-215	ENST00000624193	RHOH	Q15669	191 aa		10.13	□□□□□ -0.79
ATRX-215	ENST00000624193		Q8N3U1	123 aa		10.13	□□□□□ -0.79
ATRX-215	ENST00000624193	IGHV3-73	A0A0B4J1V6	119 aa		10.12	□□□□□ -0.79
ATRX-215	ENST00000624193	TRBV6-4	A0A1B0GX49	114 aa		10.12	□□□□□ -0.79
ATRX-215	ENST00000624193	LINC01620	Q4KN68	170 aa		10.12	□□□□□ -0.79
ATRX-215	ENST00000624193	SCX	Q7RTU7	201 aa		10.12	□□□□□ -0.79
ATRX-215	ENST00000624193	NUDT10	Q8NFP7	164 aa		10.12	□□□□□ -0.79
ATRX-215	ENST00000624193	NUDT11	Q96G61	164 aa		10.12	□□□□□ -0.79
ATRX-215	ENST00000624193	RNASE7	Q9H1E1	156 aa	Known RBP	10.12	□□□□□ -0.79
ATRX-215	ENST00000624193	GTSF1L	Q9H1H1	148 aa		10.12	□□□□□ -0.79
ATRX-215	ENST00000624193	DNAH8	Q96JB1	4490 aa		10.12	□□□□□ -0.79
ATRX-215	ENST00000624193	MUC21	A0A0G2JKD1	596 aa		10.11	□□□□□ -0.79
ATRX-215	ENST00000624193	MUC21	A0A140T8X8	626 aa		10.11	□□□□□ -0.79
ATRX-215	ENST00000624193		M0R381	172 aa		10.11	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 1127.8 ms