RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 WNK2Q9Y3S1 2297 aa9.49□□□□□ -0.89
LITAF-221ENST00000622633 IGHV7-81A0A0B4J1V7 117 aa9.49□□□□□ -0.89
LITAF-221ENST00000622633 COX7CP15954 63 aa9.49□□□□□ -0.89
LITAF-221ENST00000622633 C11orf71Q6IPW1 123 aa9.49□□□□□ -0.89
LITAF-221ENST00000622633 HRNRQ86YZ3 2850 aaPredicted RBP9.49□□□□□ -0.89
LITAF-221ENST00000622633 C2orf48Q96LS8 159 aa9.48□□□□□ -0.89
LITAF-221ENST00000622633 LINC00527Q9UJ94 153 aa9.48□□□□□ -0.89
LITAF-221ENST00000622633 ZNF575Q86XF7 245 aa9.48□□□□□ -0.89
LITAF-221ENST00000622633 IMUPQ9GZP8 106 aa9.48□□□□□ -0.89
LITAF-221ENST00000622633 LINC01546A6NGU7 62 aa9.47□□□□□ -0.89
LITAF-221ENST00000622633 CKS2P33552 79 aa9.47□□□□□ -0.89
LITAF-221ENST00000622633 ERCC8Q13216 396 aa9.47□□□□□ -0.89
LITAF-221ENST00000622633 COX8CQ7Z4L0 72 aa9.47□□□□□ -0.89
LITAF-221ENST00000622633 Q8N9W7 124 aa9.47□□□□□ -0.89
LITAF-221ENST00000622633 MSRB1Q9NZV6 116 aa9.47□□□□□ -0.89
LITAF-221ENST00000622633 ASH1LQ9NR48 2969 aaKnown RBP9.47□□□□□ -0.89
LITAF-221ENST00000622633 ATRXP46100 2492 aa9.47□□□□□ -0.89
LITAF-221ENST00000622633 IGHV3-66A0A0C4DH42 116 aa9.46□□□□□ -0.89
LITAF-221ENST00000622633 hADV29S1A0JD25 119 aa9.46□□□□□ -0.89
LITAF-221ENST00000622633 PRAC2D3DTV9 90 aa9.46□□□□□ -0.89
LITAF-221ENST00000622633 CFC1BP0CG36 223 aa9.46□□□□□ -0.89
LITAF-221ENST00000622633 CFC1P0CG37 223 aa9.46□□□□□ -0.89
LITAF-221ENST00000622633 FAM19A4Q96LR4 140 aa9.46□□□□□ -0.89
LITAF-221ENST00000622633 PKIGQ9Y2B9 76 aa9.46□□□□□ -0.89
LITAF-221ENST00000622633 PYGO1Q9Y3Y4 419 aa9.46□□□□□ -0.89
LITAF-221ENST00000622633 H3BMM0 161 aa9.46□□□□□ -0.9
LITAF-221ENST00000622633 CACNA1BQ00975 2339 aa9.46□□□□□ -0.9
LITAF-221ENST00000622633 ECSCRQ19T08 205 aa9.46□□□□□ -0.9
LITAF-221ENST00000622633 SVEP1Q4LDE5 3571 aa9.46□□□□□ -0.9
LITAF-221ENST00000622633 MINOS1Q5TGZ0 78 aa9.46□□□□□ -0.9
LITAF-221ENST00000622633 LINC00336Q6ZUF6 198 aa9.46□□□□□ -0.9
LITAF-221ENST00000622633 UBE2WQ96B02 151 aa9.46□□□□□ -0.9
LITAF-221ENST00000622633 DSCR8Q96T75 97 aa9.46□□□□□ -0.9
LITAF-221ENST00000622633 MINOS1-NBL1R4GNA1 71 aa9.46□□□□□ -0.9
LITAF-221ENST00000622633 FAM240AA0A1B0GVK7 77 aa9.45□□□□□ -0.9
LITAF-221ENST00000622633 C15orf32Q32M92 178 aa9.45□□□□□ -0.9
LITAF-221ENST00000622633 LINC01559Q495D7 138 aa9.45□□□□□ -0.9
LITAF-221ENST00000622633 RNF182Q8N6D2 247 aa9.45□□□□□ -0.9
LITAF-221ENST00000622633 PLEKHB2Q96CS7 222 aa9.45□□□□□ -0.9
LITAF-221ENST00000622633 IGF2RP11717 2491 aa9.45□□□□□ -0.9
LITAF-221ENST00000622633 IGHV3OR16-13A0A075B7E8 117 aa9.45□□□□□ -0.9
LITAF-221ENST00000622633 IGHV3-74A0A0B4J1X5 117 aa9.45□□□□□ -0.9
LITAF-221ENST00000622633 A0A1W2PPR1 153 aa9.44□□□□□ -0.9
LITAF-221ENST00000622633 GAS8-AS1O95177 125 aa9.44□□□□□ -0.9
LITAF-221ENST00000622633 TMEM86BQ8N661 226 aa9.44□□□□□ -0.9
LITAF-221ENST00000622633 SIRPDQ9H106 197 aa9.44□□□□□ -0.9
LITAF-221ENST00000622633 TRACP01848 142 aa9.44□□□□□ -0.9
LITAF-221ENST00000622633 LINC01620Q4KN68 170 aa9.44□□□□□ -0.9
LITAF-221ENST00000622633 IGHV3-49A0A0A0MS15 119 aa9.43□□□□□ -0.9
LITAF-221ENST00000622633 ATP6V0E1O15342 81 aa9.43□□□□□ -0.9
LITAF-221ENST00000622633 ZNF22P17026 224 aaPredicted RBP9.43□□□□□ -0.9
LITAF-221ENST00000622633 TMEM258P61165 79 aa9.43□□□□□ -0.9
LITAF-221ENST00000622633 RNF185Q96GF1 192 aa9.43□□□□□ -0.9
LITAF-221ENST00000622633 G3V318 75 aa9.43□□□□□ -0.9
LITAF-221ENST00000622633 BUB3O43684 328 aa9.43□□□□□ -0.9
LITAF-221ENST00000622633 KLRB1Q12918 225 aa9.43□□□□□ -0.9
LITAF-221ENST00000622633 CLEC19AQ6UXS0 136 aa9.43□□□□□ -0.9
LITAF-221ENST00000622633 FAM110DQ8TAY7 271 aaPredicted RBP9.43□□□□□ -0.9
LITAF-221ENST00000622633 PSMG3-AS1Q96PY0 264 aa9.43□□□□□ -0.9
LITAF-221ENST00000622633 SPANXDQ9BXN6 97 aa9.43□□□□□ -0.9
LITAF-221ENST00000622633 ZFAND3Q9H8U3 227 aa9.43□□□□□ -0.9
LITAF-221ENST00000622633 COL6A6A6NMZ7 2263 aa9.43□□□□□ -0.9
LITAF-221ENST00000622633 SPTBN1Q01082 2364 aaKnown RBP9.42□□□□□ -0.9
LITAF-221ENST00000622633 ATP5G1P05496 136 aa9.42□□□□□ -0.9
LITAF-221ENST00000622633 IL17RELQ6ZVW7 336 aa9.42□□□□□ -0.9
LITAF-221ENST00000622633 Q8N8P6 123 aa9.42□□□□□ -0.9
LITAF-221ENST00000622633 V9GYY9 64 aa9.42□□□□□ -0.9
LITAF-221ENST00000622633 TRBV10-2A0A0K0K1G8 114 aa9.42□□□□□ -0.9
LITAF-221ENST00000622633 ELANEP08246 267 aa9.42□□□□□ -0.9
LITAF-221ENST00000622633 PLNP26678 52 aa9.42□□□□□ -0.9
LITAF-221ENST00000622633 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.42□□□□□ -0.9
LITAF-221ENST00000622633 PRO1854Q9UHT4 67 aa9.42□□□□□ -0.9
LITAF-221ENST00000622633 GATA1P15976 413 aaPredicted RBP9.41□□□□□ -0.9
LITAF-221ENST00000622633 NXT2Q9NPJ8 142 aaKnown RBP9.41□□□□□ -0.9
LITAF-221ENST00000622633 ZNF256Q9Y2P7 627 aaPredicted RBP9.41□□□□□ -0.9
LITAF-221ENST00000622633 CLPSL1A2RUU4 121 aa9.41□□□□□ -0.9
LITAF-221ENST00000622633 ZNF815PA8K554 130 aa9.41□□□□□ -0.9
LITAF-221ENST00000622633 SLC25A16P16260 332 aa9.41□□□□□ -0.9
LITAF-221ENST00000622633 SAA4P35542 130 aa9.41□□□□□ -0.9
LITAF-221ENST00000622633 SCGB1D4Q6XE38 83 aa9.41□□□□□ -0.9
LITAF-221ENST00000622633 CCDC140Q96MF4 163 aa9.41□□□□□ -0.9
LITAF-221ENST00000622633 UBE2E1P51965 193 aa9.4□□□□□ -0.9
LITAF-221ENST00000622633 ZNF415Q09FC8 603 aa9.4□□□□□ -0.9
LITAF-221ENST00000622633 RNF152Q8N8N0 203 aa9.4□□□□□ -0.9
LITAF-221ENST00000622633 AGPAT4-IT1Q9H0P7 198 aa9.4□□□□□ -0.9
LITAF-221ENST00000622633 TRAV41A0A0B4J266 112 aa9.4□□□□□ -0.91
LITAF-221ENST00000622633 C11orf21Q9P2W6 132 aa9.4□□□□□ -0.91
LITAF-221ENST00000622633 AKAP6Q13023 2319 aa9.4□□□□□ -0.91
LITAF-221ENST00000622633 IGKV3D-20A0A0C4DH25 116 aa9.39□□□□□ -0.91
LITAF-221ENST00000622633 P0DMU3 169 aa9.39□□□□□ -0.91
LITAF-221ENST00000622633 FAM231AP0DMU4 169 aa9.39□□□□□ -0.91
LITAF-221ENST00000622633 FAM231CP0DMU5 169 aa9.39□□□□□ -0.91
LITAF-221ENST00000622633 COX6B1P14854 86 aa9.39□□□□□ -0.91
LITAF-221ENST00000622633 DEFB121Q5J5C9 76 aa9.39□□□□□ -0.91
LITAF-221ENST00000622633 CNFNQ9BYD5 112 aa9.39□□□□□ -0.91
LITAF-221ENST00000622633 ATXN8Q156A1 80 aa9.39□□□□□ -0.91
LITAF-221ENST00000622633 J3QQQ9 107 aa9.38□□□□□ -0.91
LITAF-221ENST00000622633 EIF4EBP3O60516 100 aaPredicted RBP9.38□□□□□ -0.91
LITAF-221ENST00000622633 PFN2P35080 140 aa9.38□□□□□ -0.91
LITAF-221ENST00000622633 F8VRH5 84 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms