RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 C9orf85Q96MD7 179 aa9.76□□□□□ -0.85
SKP2-209ENST00000620197 LINC01600Q96MT4 127 aa9.76□□□□□ -0.85
SKP2-209ENST00000620197 EIF4EBP3O60516 100 aaPredicted RBP9.76□□□□□ -0.85
SKP2-209ENST00000620197 CKS1BP61024 79 aa9.76□□□□□ -0.85
SKP2-209ENST00000620197 PAPPA-AS1Q5QFB9 102 aa9.76□□□□□ -0.85
SKP2-209ENST00000620197 SUMO4Q6EEV6 95 aa9.76□□□□□ -0.85
SKP2-209ENST00000620197 DCANP1Q8TF63 244 aa9.76□□□□□ -0.85
SKP2-209ENST00000620197 M0QXV9 152 aa9.75□□□□□ -0.85
SKP2-209ENST00000620197 IGHV1-69P01742 117 aa9.75□□□□□ -0.85
SKP2-209ENST00000620197 RNASE4P34096 147 aaKnown RBP9.75□□□□□ -0.85
SKP2-209ENST00000620197 DLX4Q92988 240 aaPredicted RBP9.75□□□□□ -0.85
SKP2-209ENST00000620197 ODF3Q96PU9 254 aa9.75□□□□□ -0.85
SKP2-209ENST00000620197 F6UB75 175 aa9.75□□□□□ -0.85
SKP2-209ENST00000620197 FOXC1Q12948 553 aa9.75□□□□□ -0.85
SKP2-209ENST00000620197 PMVKQ15126 192 aa9.75□□□□□ -0.85
SKP2-209ENST00000620197 SYT8Q8NBV8 401 aa9.75□□□□□ -0.85
SKP2-209ENST00000620197 A6NDX4 124 aa9.74□□□□□ -0.85
SKP2-209ENST00000620197 NSUN5P1Q3KNT7 163 aa9.74□□□□□ -0.85
SKP2-209ENST00000620197 KLHL30-AS1Q8NEE0 82 aa9.74□□□□□ -0.85
SKP2-209ENST00000620197 MRPL16Q9NX20 251 aaKnown RBP9.74□□□□□ -0.85
SKP2-209ENST00000620197 TP53TG1Q9Y2A0 90 aa9.74□□□□□ -0.85
SKP2-209ENST00000620197 CFC1BP0CG36 223 aa9.74□□□□□ -0.85
SKP2-209ENST00000620197 CFC1P0CG37 223 aa9.74□□□□□ -0.85
SKP2-209ENST00000620197 PF4V1P10720 104 aa9.74□□□□□ -0.85
SKP2-209ENST00000620197 Q6ZS46 218 aa9.74□□□□□ -0.85
SKP2-209ENST00000620197 K7EMT4 169 aa9.73□□□□□ -0.85
SKP2-209ENST00000620197 PTH2Q96A98 100 aa9.73□□□□□ -0.85
SKP2-209ENST00000620197 NOTCH3Q9UM47 2321 aa9.73□□□□□ -0.85
SKP2-209ENST00000620197 MT-ATP8P03928 68 aa9.73□□□□□ -0.85
SKP2-209ENST00000620197 XGP55808 180 aa9.73□□□□□ -0.85
SKP2-209ENST00000620197 ITPR1Q14643 2758 aa9.73□□□□□ -0.85
SKP2-209ENST00000620197 LINC00527Q9UJ94 153 aa9.73□□□□□ -0.85
SKP2-209ENST00000620197 CRYBA4P53673 196 aa9.72□□□□□ -0.85
SKP2-209ENST00000620197 FAM104AQ969W3 186 aa9.72□□□□□ -0.85
SKP2-209ENST00000620197 EDA2RQ9HAV5 297 aa9.72□□□□□ -0.85
SKP2-209ENST00000620197 TRAV26-1A0A087WT03 109 aa9.72□□□□□ -0.85
SKP2-209ENST00000620197 VCYO14598 125 aa9.72□□□□□ -0.85
SKP2-209ENST00000620197 MGPP08493 103 aa9.72□□□□□ -0.85
SKP2-209ENST00000620197 S100A4P26447 101 aaKnown RBP9.72□□□□□ -0.85
SKP2-209ENST00000620197 Q6ZUT4 128 aa9.72□□□□□ -0.85
SKP2-209ENST00000620197 ZNF418Q8TF45 676 aaPredicted RBP9.72□□□□□ -0.85
SKP2-209ENST00000620197 IGHV3-16A0A0C4DH30 117 aa9.71□□□□□ -0.85
SKP2-209ENST00000620197 RPL39P62891 51 aaKnown RBP9.71□□□□□ -0.85
SKP2-209ENST00000620197 RHPN1-AS1Q9BWJ2 59 aa9.71□□□□□ -0.85
SKP2-209ENST00000620197 JPT2Q9H910 190 aa9.71□□□□□ -0.85
SKP2-209ENST00000620197 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.71□□□□□ -0.863e-7■■■■■ 41
SKP2-209ENST00000620197 TCL1BO95988 128 aa9.71□□□□□ -0.86
SKP2-209ENST00000620197 EDN2P20800 178 aa9.71□□□□□ -0.86
SKP2-209ENST00000620197 ZNF256Q9Y2P7 627 aaPredicted RBP9.71□□□□□ -0.86
SKP2-209ENST00000620197 NCOR2Q9Y618 2525 aa9.71□□□□□ -0.86
SKP2-209ENST00000620197 M0QY20 66 aa9.71□□□□□ -0.86
SKP2-209ENST00000620197 IGHV4-39P01824 125 aa9.71□□□□□ -0.86
SKP2-209ENST00000620197 UCNP55089 124 aa9.71□□□□□ -0.86
SKP2-209ENST00000620197 DAZ1Q9NQZ3 744 aaKnown RBP9.71□□□□□ -0.86
SKP2-209ENST00000620197 A0A0J9YX75 114 aa9.7□□□□□ -0.86
SKP2-209ENST00000620197 SFTA2Q6UW10 78 aa9.7□□□□□ -0.86
SKP2-209ENST00000620197 TMEM223A0PJW6 202 aa9.7□□□□□ -0.86
SKP2-209ENST00000620197 P0DMU3 169 aa9.7□□□□□ -0.86
SKP2-209ENST00000620197 FAM231AP0DMU4 169 aa9.7□□□□□ -0.86
SKP2-209ENST00000620197 FAM231CP0DMU5 169 aa9.7□□□□□ -0.86
SKP2-209ENST00000620197 PSMB2P49721 201 aa9.7□□□□□ -0.86
SKP2-209ENST00000620197 CELSR2Q9HCU4 2923 aa9.69□□□□□ -0.86
SKP2-209ENST00000620197 TEN1Q86WV5 123 aa9.69□□□□□ -0.86
SKP2-209ENST00000620197 C10orf126Q8N4M7 172 aa9.69□□□□□ -0.86
SKP2-209ENST00000620197 GEMIN7Q9H840 131 aaKnown RBP9.69□□□□□ -0.86
SKP2-209ENST00000620197 CRYBG3Q68DQ2 2970 aa9.69□□□□□ -0.86
SKP2-209ENST00000620197 TRBV20-1A0A075B6N2 111 aa9.69□□□□□ -0.86
SKP2-209ENST00000620197 SPINK8P0C7L1 97 aa9.69□□□□□ -0.86
SKP2-209ENST00000620197 RHOHQ15669 191 aa9.69□□□□□ -0.86
SKP2-209ENST00000620197 UBTD1Q9HAC8 227 aa9.69□□□□□ -0.86
SKP2-209ENST00000620197 CHD8Q9HCK8 2581 aa9.68□□□□□ -0.86
SKP2-209ENST00000620197 SDHAF1A6NFY7 115 aa9.68□□□□□ -0.86
SKP2-209ENST00000620197 TMEM263Q8WUH6 116 aaKnown RBP9.68□□□□□ -0.86
SKP2-209ENST00000620197 HERVK_113P61574 105 aa9.68□□□□□ -0.86
SKP2-209ENST00000620197 SCGB1D4Q6XE38 83 aa9.68□□□□□ -0.86
SKP2-209ENST00000620197 PPDPFLQ8WWR9 84 aa9.68□□□□□ -0.86
SKP2-209ENST00000620197 MDFICQ9P1T7 246 aa9.68□□□□□ -0.86
SKP2-209ENST00000620197 LOC107984156A0A0G2JMH3 177 aa9.67□□□□□ -0.86
SKP2-209ENST00000620197 IGHV4-38-2P0DP08 117 aa9.67□□□□□ -0.86
SKP2-209ENST00000620197 ARL17AQ8IVW1 177 aa9.67□□□□□ -0.86
SKP2-209ENST00000620197 MUC6Q6W4X9 2439 aa9.67□□□□□ -0.86
SKP2-209ENST00000620197 LEPROTO15243 131 aa9.67□□□□□ -0.86
SKP2-209ENST00000620197 SRSF9Q13242 221 aaKnown RBP eCLIP9.67□□□□□ -0.86
SKP2-209ENST00000620197 BRD3OSQ6XYD6 125 aa9.67□□□□□ -0.86
SKP2-209ENST00000620197 C19orf84I3L1E1 186 aa9.67□□□□□ -0.86
SKP2-209ENST00000620197 J3QQQ9 107 aa9.67□□□□□ -0.86
SKP2-209ENST00000620197 A0A0B4J2C4 111 aa9.66□□□□□ -0.86
SKP2-209ENST00000620197 PSMB8P28062 276 aa9.66□□□□□ -0.86
SKP2-209ENST00000620197 EMP1P54849 157 aa9.66□□□□□ -0.86
SKP2-209ENST00000620197 Q5PR19 223 aa9.66□□□□□ -0.86
SKP2-209ENST00000620197 KIR2DL4Q99706 377 aa9.66□□□□□ -0.86
SKP2-209ENST00000620197 LITAFQ99732 161 aa9.66□□□□□ -0.86
SKP2-209ENST00000620197 SCGB2A2Q13296 93 aa9.66□□□□□ -0.86
SKP2-209ENST00000620197 A0A087WWL8 130 aa9.65□□□□□ -0.86
SKP2-209ENST00000620197 IGHV3-11P01762 117 aa9.65□□□□□ -0.86
SKP2-209ENST00000620197 BLCAPP62952 87 aa9.65□□□□□ -0.86
SKP2-209ENST00000620197 FAM159AQ6UWV7 190 aa9.65□□□□□ -0.86
SKP2-209ENST00000620197 PRO1854Q9UHT4 67 aa9.65□□□□□ -0.86
SKP2-209ENST00000620197 IGHV4-61A0A0C4DH41 118 aa9.65□□□□□ -0.87
SKP2-209ENST00000620197 M0R2P5 195 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms