RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 IGHV3-30-3P0DP02 117 aa6.48□□□□□ -1.37
TARDBP-218ENST00000617172 IGHV3-30-5P0DP03 117 aa6.48□□□□□ -1.37
TARDBP-218ENST00000617172 ZFP82Q8N141 532 aa6.48□□□□□ -1.37
TARDBP-218ENST00000617172 FAM213BQ8TBF2 198 aa6.48□□□□□ -1.37
TARDBP-218ENST00000617172 SAMD10Q9BYL1 202 aa6.48□□□□□ -1.37
TARDBP-218ENST00000617172 JPT2Q9H910 190 aa6.48□□□□□ -1.37
TARDBP-218ENST00000617172 Q9HAA7 133 aa6.48□□□□□ -1.37
TARDBP-218ENST00000617172 COX11Q9Y6N1 276 aa6.48□□□□□ -1.37
TARDBP-218ENST00000617172 LRP1BQ9NZR2 4599 aa6.48□□□□□ -1.37
TARDBP-218ENST00000617172 IGLV5-52A0A0A0MRZ9 124 aa6.47□□□□□ -1.37
TARDBP-218ENST00000617172 TRBV10-1A0A0K0K1A3 114 aa6.47□□□□□ -1.37
TARDBP-218ENST00000617172 GRIFINA4D1Z8 144 aa6.47□□□□□ -1.37
TARDBP-218ENST00000617172 PFDN1O60925 122 aa6.47□□□□□ -1.37
TARDBP-218ENST00000617172 FUSP35637 526 aaKnown RBP eCLIP6.47□□□□□ -1.37
TARDBP-218ENST00000617172 XGP55808 180 aa6.47□□□□□ -1.37
TARDBP-218ENST00000617172 KRTAP10-1P60331 282 aa6.47□□□□□ -1.37
TARDBP-218ENST00000617172 FAM74A4Q5TZK3 123 aa6.47□□□□□ -1.37
TARDBP-218ENST00000617172 ZNF471Q9BX82 626 aaPredicted RBP6.47□□□□□ -1.37
TARDBP-218ENST00000617172 URGCP-MRPS24S4R325 110 aa6.47□□□□□ -1.37
TARDBP-218ENST00000617172 HSPG2P98160 4391 aa6.46□□□□□ -1.38
TARDBP-218ENST00000617172 SMLR1H3BR10 107 aa6.46□□□□□ -1.38
TARDBP-218ENST00000617172 M0R381 172 aa6.46□□□□□ -1.38
TARDBP-218ENST00000617172 BCL2L11O43521 198 aa6.46□□□□□ -1.38
TARDBP-218ENST00000617172 CXCL1P09341 107 aa6.46□□□□□ -1.38
TARDBP-218ENST00000617172 H2AFB1P0C5Y9 115 aa6.46□□□□□ -1.38
TARDBP-218ENST00000617172 RPL36AP83881 106 aaKnown RBP6.46□□□□□ -1.38
TARDBP-218ENST00000617172 BAGE2Q86Y30 109 aa6.46□□□□□ -1.38
TARDBP-218ENST00000617172 C14orf178Q8N769 122 aaPredicted RBP6.46□□□□□ -1.38
TARDBP-218ENST00000617172 Q8N814 137 aa6.46□□□□□ -1.38
TARDBP-218ENST00000617172 FRZBQ92765 325 aa6.46□□□□□ -1.38
TARDBP-218ENST00000617172 RPL36ALQ969Q0 106 aaKnown RBP6.46□□□□□ -1.38
TARDBP-218ENST00000617172 RMI2Q96E14 147 aa6.46□□□□□ -1.38
TARDBP-218ENST00000617172 TMEM70Q9BUB7 260 aa6.46□□□□□ -1.38
TARDBP-218ENST00000617172 MLST8Q9BVC4 326 aa6.46□□□□□ -1.38
TARDBP-218ENST00000617172 DNAH5Q8TE73 4624 aa6.45□□□□□ -1.38
TARDBP-218ENST00000617172 TRBV7-3A0A075B6L6 115 aa6.45□□□□□ -1.38
TARDBP-218ENST00000617172 A0A087WWL8 130 aa6.45□□□□□ -1.38
TARDBP-218ENST00000617172 TMSB15BA0A087X1C1 80 aa6.45□□□□□ -1.38
TARDBP-218ENST00000617172 C1QBP02746 253 aa6.45□□□□□ -1.38
TARDBP-218ENST00000617172 ELOBQ15370 118 aa6.45□□□□□ -1.38
TARDBP-218ENST00000617172 EIF5AL1Q6IS14 154 aaKnown RBP6.45□□□□□ -1.38
TARDBP-218ENST00000617172 KCNIP4Q6PIL6 250 aa6.45□□□□□ -1.38
TARDBP-218ENST00000617172 TMUB2Q71RG4 321 aa6.45□□□□□ -1.38
TARDBP-218ENST00000617172 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.45□□□□□ -1.38
TARDBP-218ENST00000617172 CHCHD7Q9BUK0 85 aa6.45□□□□□ -1.38
TARDBP-218ENST00000617172 Q9UF83 564 aa6.45□□□□□ -1.38
TARDBP-218ENST00000617172 SCO2A0A1W2PP80 73 aa6.44□□□□□ -1.38
TARDBP-218ENST00000617172 TEX46H3BTG2 121 aa6.44□□□□□ -1.38
TARDBP-218ENST00000617172 RAB5CP51148 216 aa6.44□□□□□ -1.38
TARDBP-218ENST00000617172 RAB4BP61018 213 aa6.44□□□□□ -1.38
TARDBP-218ENST00000617172 DAZ4Q86SG3 579 aaKnown RBP6.44□□□□□ -1.38
TARDBP-218ENST00000617172 NIT1Q86X76 327 aa6.44□□□□□ -1.38
TARDBP-218ENST00000617172 SSBP4Q9BWG4 385 aaPredicted RBP6.44□□□□□ -1.38
TARDBP-218ENST00000617172 MANBALQ9NQG1 85 aa6.44□□□□□ -1.38
TARDBP-218ENST00000617172 DAZ3Q9NR90 486 aaKnown RBP6.44□□□□□ -1.38
TARDBP-218ENST00000617172 A0A087WX48 190 aa6.43□□□□□ -1.38
TARDBP-218ENST00000617172 TRAV1-1A0A0B4J248 108 aa6.43□□□□□ -1.38
TARDBP-218ENST00000617172 A0A1B0GV50 99 aa6.43□□□□□ -1.38
TARDBP-218ENST00000617172 FAM229AH3BQW9 127 aa6.43□□□□□ -1.38
TARDBP-218ENST00000617172 OR5AL1P0C617 328 aa6.43□□□□□ -1.38
TARDBP-218ENST00000617172 UBE2D3P61077 147 aa6.43□□□□□ -1.38
TARDBP-218ENST00000617172 UBE2D2P62837 147 aa6.43□□□□□ -1.38
TARDBP-218ENST00000617172 Q0VG73 95 aa6.43□□□□□ -1.38
TARDBP-218ENST00000617172 SPANXN1Q5VSR9 72 aa6.43□□□□□ -1.38
TARDBP-218ENST00000617172 OR10G8Q8NGN5 311 aa6.43□□□□□ -1.38
TARDBP-218ENST00000617172 SNAI2O43623 268 aa6.42□□□□□ -1.38
TARDBP-218ENST00000617172 INAFM2P0DMQ5 153 aa6.42□□□□□ -1.38
TARDBP-218ENST00000617172 RPL35P42766 123 aaKnown RBP6.42□□□□□ -1.38
TARDBP-218ENST00000617172 PKIAP61925 76 aa6.42□□□□□ -1.38
TARDBP-218ENST00000617172 Q5VSD8 79 aa6.42□□□□□ -1.38
TARDBP-218ENST00000617172 Q8N3U1 123 aa6.42□□□□□ -1.38
TARDBP-218ENST00000617172 Q8N976 141 aa6.42□□□□□ -1.38
TARDBP-218ENST00000617172 OR10AG1Q8NH19 301 aa6.42□□□□□ -1.38
TARDBP-218ENST00000617172 ABCA13Q86UQ4 5058 aa6.41□□□□□ -1.38
TARDBP-218ENST00000617172 TRBV6-8A0A0A6YYG3 113 aa6.41□□□□□ -1.38
TARDBP-218ENST00000617172 TMEM262E9PQX1 116 aa6.41□□□□□ -1.38
TARDBP-218ENST00000617172 SMIM17P0DL12 118 aa6.41□□□□□ -1.38
TARDBP-218ENST00000617172 RPL19P84098 196 aaKnown RBP6.41□□□□□ -1.38
TARDBP-218ENST00000617172 ZNF56Q15929 161 aa6.41□□□□□ -1.38
TARDBP-218ENST00000617172 TMEM97Q5BJF2 176 aa6.41□□□□□ -1.38
TARDBP-218ENST00000617172 PRR27Q6MZM9 219 aa6.41□□□□□ -1.38
TARDBP-218ENST00000617172 C11orf52Q96A22 123 aa6.41□□□□□ -1.38
TARDBP-218ENST00000617172 DAZAP1Q96EP5 407 aaKnown RBP6.41□□□□□ -1.38
TARDBP-218ENST00000617172 SMIM12Q96EX1 92 aa6.41□□□□□ -1.38
TARDBP-218ENST00000617172 GNG13Q9P2W3 67 aa6.41□□□□□ -1.38
TARDBP-218ENST00000617172 KLK12Q9UKR0 248 aa6.41□□□□□ -1.38
TARDBP-218ENST00000617172 APOBP04114 4563 aaKnown RBP6.4□□□□□ -1.38
TARDBP-218ENST00000617172 IGKV2D-24A0A075B6R9 120 aa6.4□□□□□ -1.38
TARDBP-218ENST00000617172 XKRY2A2RUG3 117 aa6.4□□□□□ -1.38
TARDBP-218ENST00000617172 F5H697 171 aa6.4□□□□□ -1.38
TARDBP-218ENST00000617172 PDE6DO43924 150 aa6.4□□□□□ -1.38
TARDBP-218ENST00000617172 SMR3BP02814 79 aaPredicted RBP6.4□□□□□ -1.38
TARDBP-218ENST00000617172 RPS20P60866 119 aaKnown RBP6.4□□□□□ -1.38
TARDBP-218ENST00000617172 NEXN-AS1Q8NBZ9 246 aa6.4□□□□□ -1.38
TARDBP-218ENST00000617172 UBE2WQ96B02 151 aa6.4□□□□□ -1.38
TARDBP-218ENST00000617172 BIN3Q9NQY0 253 aa6.4□□□□□ -1.38
TARDBP-218ENST00000617172 RBFOX3A6NFN3 312 aa6.39□□□□□ -1.39
TARDBP-218ENST00000617172 F2Z2F3 143 aa6.39□□□□□ -1.39
TARDBP-218ENST00000617172 SULT1A2P50226 295 aa6.39□□□□□ -1.39
TARDBP-218ENST00000617172 CCL20P78556 96 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms