RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 PEMTQ9UBM1 199 aa11.73□□□□□ -0.53
NOP56-220ENST00000616692 FAM104BQ5XKR9 115 aa11.73□□□□□ -0.53
NOP56-220ENST00000616692 GGNQ86UU5 652 aa11.73□□□□□ -0.53
NOP56-220ENST00000616692 LOXL3P58215 753 aa11.72□□□□□ -0.53
NOP56-220ENST00000616692 FGF12P61328 243 aa11.72□□□□□ -0.53
NOP56-220ENST00000616692 SCGB1D4Q6XE38 83 aa11.72□□□□□ -0.53
NOP56-220ENST00000616692 TRBV7-1A0A0A6YYK4 115 aa11.72□□□□□ -0.53
NOP56-220ENST00000616692 UPK2O00526 184 aa11.72□□□□□ -0.53
NOP56-220ENST00000616692 C9orf139Q6ZV77 190 aa11.72□□□□□ -0.53
NOP56-220ENST00000616692 IGHV4-39P01824 125 aa11.71□□□□□ -0.53
NOP56-220ENST00000616692 FHL2Q14192 279 aa11.71□□□□□ -0.53
NOP56-220ENST00000616692 AKAP6Q13023 2319 aa11.71□□□□□ -0.53
NOP56-220ENST00000616692 SDIM1Q6ZPB5 146 aa11.71□□□□□ -0.54
NOP56-220ENST00000616692 A0A1W2PQD3 144 aa11.7□□□□□ -0.54
NOP56-220ENST00000616692 FOXB1Q99853 325 aa11.7□□□□□ -0.54
NOP56-220ENST00000616692 DSCAMO60469 2012 aa11.69□□□□□ -0.54
NOP56-220ENST00000616692 LINC01546A6NGU7 62 aa11.69□□□□□ -0.54
NOP56-220ENST00000616692 ZNF815PA8K554 130 aa11.69□□□□□ -0.54
NOP56-220ENST00000616692 HIVEP2P31629 2446 aa11.69□□□□□ -0.54
NOP56-220ENST00000616692 C17orf100A8MU93 164 aa11.69□□□□□ -0.54
NOP56-220ENST00000616692 H7C423 109 aa11.69□□□□□ -0.54
NOP56-220ENST00000616692 NDUFA3O95167 84 aa11.69□□□□□ -0.54
NOP56-220ENST00000616692 ZNF497Q6ZNH5 498 aa11.69□□□□□ -0.54
NOP56-220ENST00000616692 IGHV3-33P01772 117 aa11.68□□□□□ -0.54
NOP56-220ENST00000616692 C22orf34Q6ZV56 151 aa11.68□□□□□ -0.54
NOP56-220ENST00000616692 TMEM243Q9BU79 118 aa11.68□□□□□ -0.54
NOP56-220ENST00000616692 PLAUP00749 431 aa11.68□□□□□ -0.54
NOP56-220ENST00000616692 RNF223E7ERA6 249 aa11.67□□□□□ -0.54
NOP56-220ENST00000616692 FAM201AQ5SY85 155 aa11.67□□□□□ -0.54
NOP56-220ENST00000616692 KNCNA6PVL3 124 aa11.66□□□□□ -0.54
NOP56-220ENST00000616692 LINC00596Q86U02 117 aa11.66□□□□□ -0.54
NOP56-220ENST00000616692 EMC6Q9BV81 110 aa11.66□□□□□ -0.54
NOP56-220ENST00000616692 RNF7Q9UBF6 113 aa11.66□□□□□ -0.54
NOP56-220ENST00000616692 TRBV6-6A0A0A6YYG2 114 aa11.66□□□□□ -0.54
NOP56-220ENST00000616692 A0A0B4J2C4 111 aa11.66□□□□□ -0.54
NOP56-220ENST00000616692 DLX1P56177 255 aa11.66□□□□□ -0.54
NOP56-220ENST00000616692 H3BTX0 84 aa11.65□□□□□ -0.54
NOP56-220ENST00000616692 Q6ZRU5 148 aa11.65□□□□□ -0.54
NOP56-220ENST00000616692 EEF1AKMT3Q96AZ1 226 aa11.65□□□□□ -0.54
NOP56-220ENST00000616692 FAM167A-AS1Q96KT0 104 aa11.65□□□□□ -0.54
NOP56-220ENST00000616692 ZNF714Q96N38 554 aa11.65□□□□□ -0.54
NOP56-220ENST00000616692 IGHV3-30P01768 117 aa11.65□□□□□ -0.54
NOP56-220ENST00000616692 IGHV3-30-5P0DP03 117 aa11.65□□□□□ -0.54
NOP56-220ENST00000616692 MRPL51Q4U2R6 128 aaKnown RBP11.65□□□□□ -0.54
NOP56-220ENST00000616692 MRPL55Q7Z7F7 128 aaKnown RBP11.65□□□□□ -0.54
NOP56-220ENST00000616692 ZNF837Q96EG3 531 aaPredicted RBP11.65□□□□□ -0.54
NOP56-220ENST00000616692 MRPL53Q96EL3 112 aaKnown RBP11.65□□□□□ -0.54
NOP56-220ENST00000616692 FMC1Q96HJ9 113 aa11.64□□□□□ -0.55
NOP56-220ENST00000616692 IQCF6A8MYZ5 107 aa11.64□□□□□ -0.55
NOP56-220ENST00000616692 SS18Q15532 418 aa11.63□□□□□ -0.55
NOP56-220ENST00000616692 PRR15Q8IV56 129 aa11.63□□□□□ -0.55
NOP56-220ENST00000616692 A0A096LNT2 108 aa11.63□□□□□ -0.55
NOP56-220ENST00000616692 ORMDL2Q53FV1 153 aa11.63□□□□□ -0.55
NOP56-220ENST00000616692 CKS2P33552 79 aa11.63□□□□□ -0.55
NOP56-220ENST00000616692 HILS1P60008 231 aa11.63□□□□□ -0.55
NOP56-220ENST00000616692 ERCC8Q13216 396 aa11.63□□□□□ -0.55
NOP56-220ENST00000616692 FAM223AQ8IWN6 122 aa11.63□□□□□ -0.55
NOP56-220ENST00000616692 ZNF799Q96GE5 643 aa11.63□□□□□ -0.55
NOP56-220ENST00000616692 IGHV3-13P01766 116 aa11.62□□□□□ -0.55
NOP56-220ENST00000616692 RHOHQ15669 191 aa11.62□□□□□ -0.55
NOP56-220ENST00000616692 TMEM263Q8WUH6 116 aaKnown RBP11.62□□□□□ -0.55
NOP56-220ENST00000616692 TMEM190Q8WZ59 177 aa11.62□□□□□ -0.55
NOP56-220ENST00000616692 Q9UF83 564 aa11.62□□□□□ -0.55
NOP56-220ENST00000616692 MAP1AP78559 2803 aaPredicted RBP11.61□□□□□ -0.55
NOP56-220ENST00000616692 A0A0J9YY99 117 aa11.61□□□□□ -0.55
NOP56-220ENST00000616692 F8VRH5 84 aa11.61□□□□□ -0.55
NOP56-220ENST00000616692 H7C2G1 150 aa11.61□□□□□ -0.55
NOP56-220ENST00000616692 Q1RN00 199 aa11.61□□□□□ -0.55
NOP56-220ENST00000616692 DAZ4Q86SG3 579 aaKnown RBP11.61□□□□□ -0.55
NOP56-220ENST00000616692 SRSF12Q8WXF0 261 aaKnown RBP11.61□□□□□ -0.55
NOP56-220ENST00000616692 PAXXQ9BUH6 204 aa11.61□□□□□ -0.55
NOP56-220ENST00000616692 DAZ1Q9NQZ3 744 aaKnown RBP11.61□□□□□ -0.55
NOP56-220ENST00000616692 SLC25A15Q9Y619 301 aa11.61□□□□□ -0.55
NOP56-220ENST00000616692 CSPG4Q6UVK1 2322 aa11.61□□□□□ -0.55
NOP56-220ENST00000616692 C17orf98A8MV24 154 aa11.61□□□□□ -0.55
NOP56-220ENST00000616692 PAX4O43316 350 aa11.61□□□□□ -0.55
NOP56-220ENST00000616692 BSPH1Q075Z2 132 aa11.61□□□□□ -0.55
NOP56-220ENST00000616692 C11orf71Q6IPW1 123 aa11.61□□□□□ -0.55
NOP56-220ENST00000616692 COPS9Q8WXC6 57 aa11.61□□□□□ -0.55
NOP56-220ENST00000616692 DYNLRB1Q9NP97 96 aa11.61□□□□□ -0.55
NOP56-220ENST00000616692 U3KQE9 123 aa11.61□□□□□ -0.55
NOP56-220ENST00000616692 TRBV30A0A0K0K1B3 111 aa11.6□□□□□ -0.55
NOP56-220ENST00000616692 SMKR1H3BMG3 65 aa11.6□□□□□ -0.55
NOP56-220ENST00000616692 CIRBPQ14011 172 aaKnown RBP11.6□□□□□ -0.55
NOP56-220ENST00000616692 MRPS36P82909 103 aaKnown RBP11.6□□□□□ -0.55
NOP56-220ENST00000616692 C11orf45Q8TAV5 145 aa11.6□□□□□ -0.55
NOP56-220ENST00000616692 CR1P17927 2039 aa11.6□□□□□ -0.55
NOP56-220ENST00000616692 IGKV3D-15A0A087WSY6 115 aa11.59□□□□□ -0.55
NOP56-220ENST00000616692 RNASE2P10153 161 aaKnown RBP11.59□□□□□ -0.55
NOP56-220ENST00000616692 MORN5Q5VZ52 161 aa11.59□□□□□ -0.55
NOP56-220ENST00000616692 SLC50A1Q9BRV3 221 aa11.59□□□□□ -0.55
NOP56-220ENST00000616692 ANK3Q12955 4377 aaKnown RBP11.59□□□□□ -0.55
NOP56-220ENST00000616692 TEX22C9J3V5 150 aa11.59□□□□□ -0.55
NOP56-220ENST00000616692 ZNF134P52741 427 aa11.59□□□□□ -0.55
NOP56-220ENST00000616692 BRWD1-AS2P59051 145 aa11.59□□□□□ -0.55
NOP56-220ENST00000616692 SNRPD3P62318 126 aaKnown RBP11.58□□□□□ -0.56
NOP56-220ENST00000616692 SRXN1Q9BYN0 137 aa11.58□□□□□ -0.56
NOP56-220ENST00000616692 TRAV12-1A0A0B4J245 112 aa11.58□□□□□ -0.56
NOP56-220ENST00000616692 SPRY2O43597 315 aa11.58□□□□□ -0.56
NOP56-220ENST00000616692 DUTP33316 252 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms