RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 STHQ8IWL8 128 aa7.85□□□□□ -1.15
COL4A1-205ENST00000615732 PRELID3AQ96N28 172 aa7.85□□□□□ -1.15
COL4A1-205ENST00000615732 MSRB1Q9NZV6 116 aa7.85□□□□□ -1.15
COL4A1-205ENST00000615732 IGHV4-4A0A075B6R2 117 aa7.84□□□□□ -1.15
COL4A1-205ENST00000615732 A8MTW9 85 aa7.84□□□□□ -1.15
COL4A1-205ENST00000615732 GNRH2O43555 120 aa7.84□□□□□ -1.15
COL4A1-205ENST00000615732 ZNF324O75467 553 aaPredicted RBP7.84□□□□□ -1.15
COL4A1-205ENST00000615732 PPBPP02775 128 aa7.84□□□□□ -1.15
COL4A1-205ENST00000615732 ZNF124Q15973 351 aa7.84□□□□□ -1.15
COL4A1-205ENST00000615732 CHCHD1Q96BP2 118 aaKnown RBP7.84□□□□□ -1.15
COL4A1-205ENST00000615732 KMT2AQ03164 3969 aa7.83□□□□□ -1.16
COL4A1-205ENST00000615732 INSP01308 110 aa7.83□□□□□ -1.16
COL4A1-205ENST00000615732 ODF3L2Q3SX64 289 aa7.83□□□□□ -1.16
COL4A1-205ENST00000615732 DMRTA1Q5VZB9 504 aa7.83□□□□□ -1.16
COL4A1-205ENST00000615732 NIT1Q86X76 327 aa7.83□□□□□ -1.16
COL4A1-205ENST00000615732 SYT8Q8NBV8 401 aa7.83□□□□□ -1.16
COL4A1-205ENST00000615732 PRSS3P2Q8NHM4 247 aa7.83□□□□□ -1.16
COL4A1-205ENST00000615732 IL17DQ8TAD2 202 aa7.83□□□□□ -1.16
COL4A1-205ENST00000615732 AP1S3Q96PC3 154 aa7.83□□□□□ -1.16
COL4A1-205ENST00000615732 SCRT2Q9NQ03 307 aa7.83□□□□□ -1.16
COL4A1-205ENST00000615732 AGRNO00468 2067 aa7.82□□□□□ -1.16
COL4A1-205ENST00000615732 CBY3A6NI87 242 aa7.82□□□□□ -1.16
COL4A1-205ENST00000615732 SMKR1H3BMG3 65 aa7.82□□□□□ -1.16
COL4A1-205ENST00000615732 NCR2O95944 276 aa7.82□□□□□ -1.16
COL4A1-205ENST00000615732 SMIM17P0DL12 118 aa7.82□□□□□ -1.16
COL4A1-205ENST00000615732 RAB4AP20338 218 aa7.82□□□□□ -1.16
COL4A1-205ENST00000615732 TDRG1Q3Y452 100 aa7.82□□□□□ -1.16
COL4A1-205ENST00000615732 PYY3Q5JQD4 70 aa7.82□□□□□ -1.16
COL4A1-205ENST00000615732 LINC00476Q8WZB0 136 aa7.82□□□□□ -1.16
COL4A1-205ENST00000615732 RNF185Q96GF1 192 aa7.82□□□□□ -1.16
COL4A1-205ENST00000615732 MAP1LC3AQ9H492 121 aa7.82□□□□□ -1.16
COL4A1-205ENST00000615732 DPH3P1Q9H4G8 78 aa7.82□□□□□ -1.16
COL4A1-205ENST00000615732 NIT2Q9NQR4 276 aa7.82□□□□□ -1.16
COL4A1-205ENST00000615732 LAMTOR2Q9Y2Q5 125 aa7.82□□□□□ -1.16
COL4A1-205ENST00000615732 HECTD4Q9Y4D8 3996 aa7.81□□□□□ -1.16
COL4A1-205ENST00000615732 IGHV3-16A0A0C4DH30 117 aa7.81□□□□□ -1.16
COL4A1-205ENST00000615732 LOC389332A0A1B0GUA5 103 aa7.81□□□□□ -1.16
COL4A1-205ENST00000615732 SCGB1D1O95968 90 aa7.81□□□□□ -1.16
COL4A1-205ENST00000615732 MGPP08493 103 aa7.81□□□□□ -1.16
COL4A1-205ENST00000615732 LINC00614P0C842 121 aa7.81□□□□□ -1.16
COL4A1-205ENST00000615732 RNASE3P12724 160 aaKnown RBP7.81□□□□□ -1.16
COL4A1-205ENST00000615732 EVI2AP22794 236 aa7.81□□□□□ -1.16
COL4A1-205ENST00000615732 JOSD1Q15040 202 aaPredicted RBP7.81□□□□□ -1.16
COL4A1-205ENST00000615732 MRAP2Q96G30 205 aa7.81□□□□□ -1.16
COL4A1-205ENST00000615732 CLUHP3Q96NS8 147 aa7.81□□□□□ -1.16
COL4A1-205ENST00000615732 C20orf144Q9BQM9 153 aa7.81□□□□□ -1.16
COL4A1-205ENST00000615732 KIAA1109Q2LD37 5005 aa7.8□□□□□ -1.16
COL4A1-205ENST00000615732 SPRY2O43597 315 aa7.8□□□□□ -1.16
COL4A1-205ENST00000615732 NXPH4O95158 308 aa7.8□□□□□ -1.16
COL4A1-205ENST00000615732 NPYP01303 97 aa7.8□□□□□ -1.16
COL4A1-205ENST00000615732 KRTDAPP60985 99 aa7.8□□□□□ -1.16
COL4A1-205ENST00000615732 NUTF2P61970 127 aaKnown RBP7.8□□□□□ -1.16
COL4A1-205ENST00000615732 Q6ZWC4 215 aa7.8□□□□□ -1.16
COL4A1-205ENST00000615732 FAM19A2Q8N3H0 131 aa7.8□□□□□ -1.16
COL4A1-205ENST00000615732 C9orf85Q96MD7 179 aa7.8□□□□□ -1.16
COL4A1-205ENST00000615732 LINC01587Q99440 93 aa7.8□□□□□ -1.16
COL4A1-205ENST00000615732 AP5S1Q9NUS5 200 aa7.8□□□□□ -1.16
COL4A1-205ENST00000615732 CRXO43186 299 aaPredicted RBP7.79□□□□□ -1.16
COL4A1-205ENST00000615732 S100A12P80511 92 aa7.79□□□□□ -1.16
COL4A1-205ENST00000615732 ZNF415Q09FC8 603 aa7.79□□□□□ -1.16
COL4A1-205ENST00000615732 TRPT1Q86TN4 253 aaKnown RBP7.79□□□□□ -1.16
COL4A1-205ENST00000615732 C14orf178Q8N769 122 aaPredicted RBP7.79□□□□□ -1.16
COL4A1-205ENST00000615732 URB1-AS1Q96HZ7 61 aa7.79□□□□□ -1.16
COL4A1-205ENST00000615732 OVOL2Q9BRP0 275 aa7.79□□□□□ -1.16
COL4A1-205ENST00000615732 TMEM208Q9BTX3 173 aa7.79□□□□□ -1.16
COL4A1-205ENST00000615732 RYR1P21817 5038 aa7.78□□□□□ -1.16
COL4A1-205ENST00000615732 IGHV1-24A0A0C4DH33 117 aa7.78□□□□□ -1.16
COL4A1-205ENST00000615732 A0A0J9YWU9 116 aa7.78□□□□□ -1.16
COL4A1-205ENST00000615732 PCP4L1A6NKN8 68 aa7.78□□□□□ -1.16
COL4A1-205ENST00000615732 TNFRSF6BO95407 300 aa7.78□□□□□ -1.16
COL4A1-205ENST00000615732 LY6G6CO95867 125 aa7.78□□□□□ -1.16
COL4A1-205ENST00000615732 RBMY1A1P0DJD3 496 aaKnown RBP7.78□□□□□ -1.16
COL4A1-205ENST00000615732 RBMY1CP0DJD4 496 aa7.78□□□□□ -1.16
COL4A1-205ENST00000615732 HTN1P15515 57 aa7.78□□□□□ -1.16
COL4A1-205ENST00000615732 IFI27P40305 119 aaPredicted RBP7.78□□□□□ -1.16
COL4A1-205ENST00000615732 RBMY1FQ15415 496 aaKnown RBP7.78□□□□□ -1.16
COL4A1-205ENST00000615732 MDFICQ9P1T7 246 aa7.78□□□□□ -1.16
COL4A1-205ENST00000615732 HSPB8Q9UJY1 196 aa7.78□□□□□ -1.16
COL4A1-205ENST00000615732 TRAV26-2A0A0B4J265 109 aa7.77□□□□□ -1.17
COL4A1-205ENST00000615732 PPP1R17O96001 155 aa7.77□□□□□ -1.17
COL4A1-205ENST00000615732 PMCHL1Q16048 86 aa7.77□□□□□ -1.17
COL4A1-205ENST00000615732 DEFB135Q30KP9 77 aa7.77□□□□□ -1.17
COL4A1-205ENST00000615732 LINC00467Q9BRT7 94 aa7.77□□□□□ -1.17
COL4A1-205ENST00000615732 NXT2Q9NPJ8 142 aaKnown RBP7.77□□□□□ -1.17
COL4A1-205ENST00000615732 GSN-AS1Q9NRJ2 163 aa7.77□□□□□ -1.17
COL4A1-205ENST00000615732 XCL2Q9UBD3 114 aa7.77□□□□□ -1.17
COL4A1-205ENST00000615732 VPS13DQ5THJ4 4388 aa7.76□□□□□ -1.17
COL4A1-205ENST00000615732 LEPROTL1O95214 131 aa7.76□□□□□ -1.17
COL4A1-205ENST00000615732 GATA1P15976 413 aaPredicted RBP7.76□□□□□ -1.17
COL4A1-205ENST00000615732 RPL35AP18077 110 aaKnown RBP7.76□□□□□ -1.17
COL4A1-205ENST00000615732 GOLT1BQ9Y3E0 138 aa7.76□□□□□ -1.17
COL4A1-205ENST00000615732 IGHV3OR16-12A0A075B7B8 117 aa7.75□□□□□ -1.17
COL4A1-205ENST00000615732 A0A087WWL8 130 aa7.75□□□□□ -1.17
COL4A1-205ENST00000615732 C20orf202A1L168 122 aa7.75□□□□□ -1.17
COL4A1-205ENST00000615732 F5H697 171 aa7.75□□□□□ -1.17
COL4A1-205ENST00000615732 M0R2P5 195 aa7.75□□□□□ -1.17
COL4A1-205ENST00000615732 C3orf79P0CE67 100 aa7.75□□□□□ -1.17
COL4A1-205ENST00000615732 ZNF56Q15929 161 aa7.75□□□□□ -1.17
COL4A1-205ENST00000615732 FAM74A4Q5TZK3 123 aa7.75□□□□□ -1.17
COL4A1-205ENST00000615732 CDPF1Q6NVV7 123 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms