RNA–Protein interactions for RNA: ENST00000612991.4

RELA-226, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 1 (best) BASIC

Gene RELA, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-226ENST00000612991 ODF3Q96PU9 254 aa13.36□□□□□ -0.27
RELA-226ENST00000612991 TSPOP30536 169 aa13.35□□□□□ -0.27
RELA-226ENST00000612991 KRTAP24-1Q3LI83 254 aa13.35□□□□□ -0.27
RELA-226ENST00000612991 NDUFA11Q86Y39 141 aa13.35□□□□□ -0.27
RELA-226ENST00000612991 Q8N1Y9 231 aa13.35□□□□□ -0.27
RELA-226ENST00000612991 AP1S3Q96PC3 154 aa13.35□□□□□ -0.27
RELA-226ENST00000612991 A0A087WWL8 130 aa13.34□□□□□ -0.27
RELA-226ENST00000612991 HSBP1L1C9JCN9 74 aa13.34□□□□□ -0.27
RELA-226ENST00000612991 DUSP14O95147 198 aaKnown RBP13.34□□□□□ -0.27
RELA-226ENST00000612991 CD300EQ496F6 205 aaPredicted RBP13.34□□□□□ -0.27
RELA-226ENST00000612991 LBHQ53QV2 105 aaPredicted RBP13.34□□□□□ -0.27
RELA-226ENST00000612991 GOLT1BQ9Y3E0 138 aa13.34□□□□□ -0.27
RELA-226ENST00000612991 IGHV3-16A0A0C4DH30 117 aa13.33□□□□□ -0.28
RELA-226ENST00000612991 RBMY1A1P0DJD3 496 aaKnown RBP13.33□□□□□ -0.28
RELA-226ENST00000612991 RBMY1CP0DJD4 496 aa13.33□□□□□ -0.28
RELA-226ENST00000612991 HTN1P15515 57 aa13.33□□□□□ -0.28
RELA-226ENST00000612991 RBMY1FQ15415 496 aaKnown RBP13.33□□□□□ -0.28
RELA-226ENST00000612991 ST20Q9HBF5 79 aa13.33□□□□□ -0.28
RELA-226ENST00000612991 NXPH4O95158 308 aa13.33□□□□□ -0.28
RELA-226ENST00000612991 DEFB114Q30KQ6 69 aa13.33□□□□□ -0.28
RELA-226ENST00000612991 DEFB104AQ8WTQ1 72 aa13.33□□□□□ -0.28
RELA-226ENST00000612991 IGHV1OR15-1A0A075B7D0 117 aa13.32□□□□□ -0.28
RELA-226ENST00000612991 RBMY1BA6NDE4 496 aaKnown RBP13.32□□□□□ -0.28
RELA-226ENST00000612991 RBMY1EA6NEQ0 496 aaKnown RBP13.32□□□□□ -0.28
RELA-226ENST00000612991 PRM2P04554 102 aa13.32□□□□□ -0.28
RELA-226ENST00000612991 RBMY1DP0C7P1 496 aaKnown RBP13.32□□□□□ -0.28
RELA-226ENST00000612991 DKK2Q9UBU2 259 aa13.32□□□□□ -0.28
RELA-226ENST00000612991 LINC00315P59091 139 aa13.32□□□□□ -0.28
RELA-226ENST00000612991 LAGE3Q14657 143 aa13.32□□□□□ -0.28
RELA-226ENST00000612991 SMIM2Q9BVW6 85 aa13.32□□□□□ -0.28
RELA-226ENST00000612991 KIF25-AS1Q9Y6Z4 181 aa13.32□□□□□ -0.28
RELA-226ENST00000612991 SMIM17P0DL12 118 aa13.31□□□□□ -0.28
RELA-226ENST00000612991 SUMO2P61956 95 aaKnown RBP13.31□□□□□ -0.28
RELA-226ENST00000612991 STPG4Q8N801 248 aa13.31□□□□□ -0.28
RELA-226ENST00000612991 PRSS47A8MTI9 375 aa13.3□□□□□ -0.28
RELA-226ENST00000612991 LGALS9BQ3B8N2 356 aa13.3□□□□□ -0.28
RELA-226ENST00000612991 FAM74A4Q5TZK3 123 aa13.3□□□□□ -0.28
RELA-226ENST00000612991 LGALS9CQ6DKI2 356 aa13.3□□□□□ -0.28
RELA-226ENST00000612991 NEGR1Q7Z3B1 354 aa13.3□□□□□ -0.28
RELA-226ENST00000612991 CITED1Q99966 193 aa13.3□□□□□ -0.28
RELA-226ENST00000612991 MAP6D1Q9H9H5 199 aa13.3□□□□□ -0.28
RELA-226ENST00000612991 TRRAPQ9Y4A5 3859 aa13.3□□□□□ -0.28
RELA-226ENST00000612991 H3BMM0 161 aa13.3□□□□□ -0.28
RELA-226ENST00000612991 HLA-DRB4P13762 266 aa13.3□□□□□ -0.28
RELA-226ENST00000612991 C9orf85Q96MD7 179 aa13.3□□□□□ -0.28
RELA-226ENST00000612991 HLA-DRB4X5D2U9 266 aa13.3□□□□□ -0.28
RELA-226ENST00000612991 STAB1Q9NY15 2570 aa13.3□□□□□ -0.28
RELA-226ENST00000612991 F5H697 171 aa13.29□□□□□ -0.28
RELA-226ENST00000612991 PRSS1P07477 247 aa13.29□□□□□ -0.28
RELA-226ENST00000612991 HINT1P49773 126 aaPredicted RBP13.29□□□□□ -0.28
RELA-226ENST00000612991 ANKRD39Q53RE8 183 aa13.29□□□□□ -0.28
RELA-226ENST00000612991 DEFB125Q8N687 156 aa13.29□□□□□ -0.28
RELA-226ENST00000612991 NUDT3O95989 172 aa13.28□□□□□ -0.28
RELA-226ENST00000612991 SPATA3Q8NHX4 192 aa13.28□□□□□ -0.28
RELA-226ENST00000612991 CBY3A6NI87 242 aa13.28□□□□□ -0.28
RELA-226ENST00000612991 PF4P02776 101 aa13.28□□□□□ -0.28
RELA-226ENST00000612991 NUTF2P61970 127 aaKnown RBP13.28□□□□□ -0.28
RELA-226ENST00000612991 SUMO4Q6EEV6 95 aa13.28□□□□□ -0.28
RELA-226ENST00000612991 LURAP1LQ8IV03 231 aa13.28□□□□□ -0.28
RELA-226ENST00000612991 SLC25A34Q6PIV7 304 aa13.27□□□□□ -0.28
RELA-226ENST00000612991 SAP30O75446 220 aa13.27□□□□□ -0.29
RELA-226ENST00000612991 MRPL52Q86TS9 123 aaKnown RBP13.27□□□□□ -0.29
RELA-226ENST00000612991 ZNF256Q9Y2P7 627 aaPredicted RBP13.27□□□□□ -0.29
RELA-226ENST00000612991 NOTCH3Q9UM47 2321 aa13.26□□□□□ -0.29
RELA-226ENST00000612991 C20orf78Q9BR46 151 aa13.26□□□□□ -0.29
RELA-226ENST00000612991 CSTL1Q9H114 145 aa13.26□□□□□ -0.29
RELA-226ENST00000612991 MRPS16Q9Y3D3 137 aaKnown RBP13.26□□□□□ -0.29
RELA-226ENST00000612991 ODF1Q14990 250 aa13.25□□□□□ -0.29
RELA-226ENST00000612991 LINC00482Q8N8I6 264 aa13.25□□□□□ -0.29
RELA-226ENST00000612991 COL6A5A8TX70 2615 aa13.25□□□□□ -0.29
RELA-226ENST00000612991 TRAV2A0A0B4J234 112 aa13.25□□□□□ -0.29
RELA-226ENST00000612991 POM121L12Q8N7R1 296 aa13.25□□□□□ -0.29
RELA-226ENST00000612991 ZNF876PQ49A33 203 aa13.24□□□□□ -0.29
RELA-226ENST00000612991 SYT8Q8NBV8 401 aa13.24□□□□□ -0.29
RELA-226ENST00000612991 ZNF56Q15929 161 aa13.23□□□□□ -0.29
RELA-226ENST00000612991 ODF3L2Q3SX64 289 aa13.23□□□□□ -0.29
RELA-226ENST00000612991 SPAG8Q99932 426 aaPredicted RBP13.23□□□□□ -0.29
RELA-226ENST00000612991 A8MTW9 85 aa13.23□□□□□ -0.29
RELA-226ENST00000612991 CRYGDP07320 174 aa13.23□□□□□ -0.29
RELA-226ENST00000612991 TRGV11A0A075B6L2 103 aa13.22□□□□□ -0.29
RELA-226ENST00000612991 ATP5LO75964 103 aa13.22□□□□□ -0.29
RELA-226ENST00000612991 COX8AP10176 69 aa13.22□□□□□ -0.29
RELA-226ENST00000612991 ORMDL2Q53FV1 153 aa13.22□□□□□ -0.29
RELA-226ENST00000612991 MPV17L2Q567V2 206 aa13.21□□□□□ -0.29
RELA-226ENST00000612991 SCGB3A1Q96QR1 104 aa13.2□□□□□ -0.3
RELA-226ENST00000612991 MRPL35Q9NZE8 188 aaKnown RBP13.2□□□□□ -0.3
RELA-226ENST00000612991 IGHV3-73A0A0B4J1V6 119 aa13.2□□□□□ -0.3
RELA-226ENST00000612991 IGLV1-51P01701 117 aa13.2□□□□□ -0.3
RELA-226ENST00000612991 NMUP48645 174 aa13.2□□□□□ -0.3
RELA-226ENST00000612991 COL5A1-AS1Q5SY13 56 aa13.2□□□□□ -0.3
RELA-226ENST00000612991 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.19□□□□□ -0.3
RELA-226ENST00000612991 PPP1R17O96001 155 aa13.19□□□□□ -0.3
RELA-226ENST00000612991 FGF6P10767 208 aa13.19□□□□□ -0.3
RELA-226ENST00000612991 G0S2P27469 103 aa13.19□□□□□ -0.3
RELA-226ENST00000612991 MORN3Q6PF18 240 aaPredicted RBP13.19□□□□□ -0.3
RELA-226ENST00000612991 C2orf66Q6UXQ4 117 aa13.19□□□□□ -0.3
RELA-226ENST00000612991 TOMM6Q96B49 74 aa13.19□□□□□ -0.3
RELA-226ENST00000612991 XCL2Q9UBD3 114 aa13.19□□□□□ -0.3
RELA-226ENST00000612991 PCP2Q8IVA1 136 aa13.19□□□□□ -0.3
RELA-226ENST00000612991 LINC01587Q99440 93 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms