RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 IGHV3-11P01762 117 aa9.58□□□□□ -0.88
PCDHGA4-202ENST00000612927 KRTAP10-9P60411 292 aa9.58□□□□□ -0.88
PCDHGA4-202ENST00000612927 NRACQ8N912 160 aa9.58□□□□□ -0.88
PCDHGA4-202ENST00000612927 GLMPQ8WWB7 406 aa9.58□□□□□ -0.88
PCDHGA4-202ENST00000612927 C11orf21Q9P2W6 132 aa9.58□□□□□ -0.88
PCDHGA4-202ENST00000612927 ZANQ9Y493 2812 aa9.57□□□□□ -0.88
PCDHGA4-202ENST00000612927 TMEM262E9PQX1 116 aa9.57□□□□□ -0.88
PCDHGA4-202ENST00000612927 PSMB2P49721 201 aa9.57□□□□□ -0.88
PCDHGA4-202ENST00000612927 SBSPONQ8IVN8 264 aa9.57□□□□□ -0.88
PCDHGA4-202ENST00000612927 LINC01356Q8N9X3 169 aa9.57□□□□□ -0.88
PCDHGA4-202ENST00000612927 UBR5O95071 2799 aaPredicted RBP9.57□□□□□ -0.88
PCDHGA4-202ENST00000612927 TRBV20-1A0A075B6N2 111 aa9.57□□□□□ -0.88
PCDHGA4-202ENST00000612927 LINC01549A6NIU2 74 aa9.57□□□□□ -0.88
PCDHGA4-202ENST00000612927 TMEM78Q5T7P6 136 aa9.57□□□□□ -0.88
PCDHGA4-202ENST00000612927 CARD19Q96LW7 228 aa9.57□□□□□ -0.88
PCDHGA4-202ENST00000612927 USP9YO00507 2555 aaPredicted RBP9.57□□□□□ -0.88
PCDHGA4-202ENST00000612927 FAM208BQ5VWN6 2430 aa9.56□□□□□ -0.88
PCDHGA4-202ENST00000612927 ZNF688P0C7X2 276 aa9.56□□□□□ -0.88
PCDHGA4-202ENST00000612927 ZFAND6Q6FIF0 208 aa9.56□□□□□ -0.88
PCDHGA4-202ENST00000612927 KLK15Q9H2R5 256 aa9.56□□□□□ -0.88
PCDHGA4-202ENST00000612927 U3KQE9 123 aa9.56□□□□□ -0.88
PCDHGA4-202ENST00000612927 IGKV3D-20A0A0C4DH25 116 aa9.56□□□□□ -0.88
PCDHGA4-202ENST00000612927 LOC107984156A0A0G2JMH3 177 aa9.55□□□□□ -0.88
PCDHGA4-202ENST00000612927 RBAKDNA6NC62 111 aa9.55□□□□□ -0.88
PCDHGA4-202ENST00000612927 DEFB1P60022 68 aa9.55□□□□□ -0.88
PCDHGA4-202ENST00000612927 DEFB112Q30KQ8 113 aa9.55□□□□□ -0.88
PCDHGA4-202ENST00000612927 ARL17AQ8IVW1 177 aa9.55□□□□□ -0.88
PCDHGA4-202ENST00000612927 C16orf92Q96LL3 132 aa9.55□□□□□ -0.88
PCDHGA4-202ENST00000612927 C20orf173Q96LM9 149 aa9.55□□□□□ -0.88
PCDHGA4-202ENST00000612927 LRRK2Q5S007 2527 aa9.54□□□□□ -0.88
PCDHGA4-202ENST00000612927 PRSS29PA6NIE9 313 aa9.54□□□□□ -0.88
PCDHGA4-202ENST00000612927 A8MWV9 139 aa9.54□□□□□ -0.88
PCDHGA4-202ENST00000612927 IGHV4-59P01825 116 aa9.54□□□□□ -0.88
PCDHGA4-202ENST00000612927 TEX29Q8N6K0 151 aa9.54□□□□□ -0.88
PCDHGA4-202ENST00000612927 RNF223E7ERA6 249 aa9.54□□□□□ -0.88
PCDHGA4-202ENST00000612927 M0QXV9 152 aa9.54□□□□□ -0.88
PCDHGA4-202ENST00000612927 TGFAP01135 160 aa9.54□□□□□ -0.88
PCDHGA4-202ENST00000612927 ORMDL2Q53FV1 153 aa9.54□□□□□ -0.88
PCDHGA4-202ENST00000612927 H3BUA1 57 aa9.53□□□□□ -0.88
PCDHGA4-202ENST00000612927 PRR9Q5T870 116 aa9.53□□□□□ -0.88
PCDHGA4-202ENST00000612927 NEXN-AS1Q8NBZ9 246 aa9.53□□□□□ -0.88
PCDHGA4-202ENST00000612927 PRADC1Q9BSG0 188 aa9.53□□□□□ -0.88
PCDHGA4-202ENST00000612927 IGKV3-7A0A075B6H7 116 aa9.53□□□□□ -0.88
PCDHGA4-202ENST00000612927 IGHV4-4A0A075B6R2 117 aa9.53□□□□□ -0.88
PCDHGA4-202ENST00000612927 ZNF815PA8K554 130 aa9.53□□□□□ -0.88
PCDHGA4-202ENST00000612927 CD7P09564 240 aa9.53□□□□□ -0.88
PCDHGA4-202ENST00000612927 ZFP2Q6ZN57 461 aa9.53□□□□□ -0.88
PCDHGA4-202ENST00000612927 GPHB5Q86YW7 130 aa9.53□□□□□ -0.88
PCDHGA4-202ENST00000612927 PTH2Q96A98 100 aa9.53□□□□□ -0.88
PCDHGA4-202ENST00000612927 TOMM6Q96B49 74 aa9.53□□□□□ -0.88
PCDHGA4-202ENST00000612927 SMIM2Q9BVW6 85 aa9.53□□□□□ -0.88
PCDHGA4-202ENST00000612927 SRD5A1P18405 259 aa9.52□□□□□ -0.88
PCDHGA4-202ENST00000612927 CFHR3Q02985 330 aa9.52□□□□□ -0.88
PCDHGA4-202ENST00000612927 SRSF9Q13242 221 aaKnown RBP eCLIP9.52□□□□□ -0.88
PCDHGA4-202ENST00000612927 USMG5Q96IX5 58 aa9.52□□□□□ -0.88
PCDHGA4-202ENST00000612927 SCGB3A1Q96QR1 104 aa9.52□□□□□ -0.88
PCDHGA4-202ENST00000612927 ANKRD17O75179 2603 aaKnown RBP9.52□□□□□ -0.89
PCDHGA4-202ENST00000612927 IGLV1-40P01703 118 aa9.52□□□□□ -0.89
PCDHGA4-202ENST00000612927 SCGB1D4Q6XE38 83 aa9.52□□□□□ -0.89
PCDHGA4-202ENST00000612927 MRPL53Q96EL3 112 aaKnown RBP9.52□□□□□ -0.89
PCDHGA4-202ENST00000612927 J3QLI3 93 aa9.51□□□□□ -0.89
PCDHGA4-202ENST00000612927 C9orf47Q6ZRZ4 202 aa9.51□□□□□ -0.89
PCDHGA4-202ENST00000612927 NDUFA11Q86Y39 141 aa9.51□□□□□ -0.89
PCDHGA4-202ENST00000612927 NDUFA4O00483 81 aa9.51□□□□□ -0.89
PCDHGA4-202ENST00000612927 TCL1BO95988 128 aa9.51□□□□□ -0.89
PCDHGA4-202ENST00000612927 EDN2P20800 178 aa9.51□□□□□ -0.89
PCDHGA4-202ENST00000612927 ASIPP42127 132 aa9.51□□□□□ -0.89
PCDHGA4-202ENST00000612927 C5orf47Q569G3 176 aa9.51□□□□□ -0.89
PCDHGA4-202ENST00000612927 EPG5Q9HCE0 2579 aa9.51□□□□□ -0.89
PCDHGA4-202ENST00000612927 TRAV26-2A0A0B4J265 109 aa9.5□□□□□ -0.89
PCDHGA4-202ENST00000612927 IGHV7-4-1A0A0J9YVY3 117 aa9.5□□□□□ -0.89
PCDHGA4-202ENST00000612927 IGHV4-31P0DP07 118 aa9.5□□□□□ -0.89
PCDHGA4-202ENST00000612927 RPL11P62913 178 aaKnown RBP9.5□□□□□ -0.89
PCDHGA4-202ENST00000612927 C9orf139Q6ZV77 190 aa9.5□□□□□ -0.89
PCDHGA4-202ENST00000612927 ANKRD29Q8N6D5 301 aa9.5□□□□□ -0.89
PCDHGA4-202ENST00000612927 VPREB3Q9UKI3 123 aa9.5□□□□□ -0.89
PCDHGA4-202ENST00000612927 SPRY2O43597 315 aa9.5□□□□□ -0.89
PCDHGA4-202ENST00000612927 DEFB113Q30KQ7 82 aa9.5□□□□□ -0.89
PCDHGA4-202ENST00000612927 RHODO00212 210 aa9.49□□□□□ -0.89
PCDHGA4-202ENST00000612927 TRAV25A0A0B4J276 109 aa9.49□□□□□ -0.89
PCDHGA4-202ENST00000612927 F6UB75 175 aa9.49□□□□□ -0.89
PCDHGA4-202ENST00000612927 H3BVH4 76 aa9.49□□□□□ -0.89
PCDHGA4-202ENST00000612927 PLEKHB2Q96CS7 222 aa9.49□□□□□ -0.89
PCDHGA4-202ENST00000612927 SOCS3O14543 225 aa9.49□□□□□ -0.89
PCDHGA4-202ENST00000612927 FSHBP01225 129 aa9.49□□□□□ -0.89
PCDHGA4-202ENST00000612927 C10orf99Q6UWK7 81 aa9.49□□□□□ -0.89
PCDHGA4-202ENST00000612927 BAALCQ8WXS3 180 aa9.49□□□□□ -0.89
PCDHGA4-202ENST00000612927 BEX4Q9NWD9 120 aaPredicted RBP9.49□□□□□ -0.89
PCDHGA4-202ENST00000612927 PTPN13Q12923 2485 aa9.48□□□□□ -0.89
PCDHGA4-202ENST00000612927 NHLRC4P0CG21 123 aaPredicted RBP9.48□□□□□ -0.89
PCDHGA4-202ENST00000612927 SPANXN1Q5VSR9 72 aa9.48□□□□□ -0.89
PCDHGA4-202ENST00000612927 SFTA2Q6UW10 78 aa9.48□□□□□ -0.89
PCDHGA4-202ENST00000612927 C10orf126Q8N4M7 172 aa9.48□□□□□ -0.89
PCDHGA4-202ENST00000612927 CR1P17927 2039 aa9.48□□□□□ -0.89
PCDHGA4-202ENST00000612927 RASL10AQ92737 203 aa9.48□□□□□ -0.89
PCDHGA4-202ENST00000612927 PPDPFQ9H3Y8 114 aa9.48□□□□□ -0.89
PCDHGA4-202ENST00000612927 SPANXA1Q9NS26 97 aa9.48□□□□□ -0.89
PCDHGA4-202ENST00000612927 ABCA12Q86UK0 2595 aa9.47□□□□□ -0.89
PCDHGA4-202ENST00000612927 SUMO2P61956 95 aaKnown RBP9.47□□□□□ -0.89
PCDHGA4-202ENST00000612927 PAPPA-AS1Q5QFB9 102 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms