RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 RNASE13Q5GAN3 156 aaKnown RBP10.02□□□□□ -0.81
TCF3-220ENST00000611869 ZNF493Q6ZR52 646 aa10.02□□□□□ -0.81
TCF3-220ENST00000611869 TTTY13Q9BZ97 58 aa10.02□□□□□ -0.81
TCF3-220ENST00000611869 RAI1Q7Z5J4 1906 aaPredicted RBP10.02□□□□□ -0.81
TCF3-220ENST00000611869 TIMM21Q9BVV7 248 aa10.02□□□□□ -0.81
TCF3-220ENST00000611869 A0A087WX48 190 aa10.02□□□□□ -0.81
TCF3-220ENST00000611869 GAGE12BA1L429 117 aa10.02□□□□□ -0.81
TCF3-220ENST00000611869 TMEM238C9JI98 176 aa10.02□□□□□ -0.81
TCF3-220ENST00000611869 GAGE7O76087 117 aa10.02□□□□□ -0.81
TCF3-220ENST00000611869 GAGE12FP0CL80 117 aa10.02□□□□□ -0.81
TCF3-220ENST00000611869 GAGE12GP0CL81 117 aa10.02□□□□□ -0.81
TCF3-220ENST00000611869 GAGE12IP0CL82 117 aa10.02□□□□□ -0.81
TCF3-220ENST00000611869 RNF114Q9Y508 228 aa10.02□□□□□ -0.81
TCF3-220ENST00000611869 Q8N1Y9 231 aa10.01□□□□□ -0.81
TCF3-220ENST00000611869 PGPEP1Q9NXJ5 209 aa10.01□□□□□ -0.81
TCF3-220ENST00000611869 DOPEY1Q5JWR5 2465 aa10.01□□□□□ -0.81
TCF3-220ENST00000611869 TMEM141Q96I45 108 aa10.01□□□□□ -0.81
TCF3-220ENST00000611869 Q6ZS46 218 aa10.01□□□□□ -0.81
TCF3-220ENST00000611869 JPT2Q9H910 190 aa10.01□□□□□ -0.81
TCF3-220ENST00000611869 ACANP16112 2415 aa10□□□□□ -0.81
TCF3-220ENST00000611869 SUMO4Q6EEV6 95 aa10□□□□□ -0.81
TCF3-220ENST00000611869 ZNF625Q96I27 306 aaPredicted RBP10□□□□□ -0.81
TCF3-220ENST00000611869 VWC2LB2RUY7 222 aa10□□□□□ -0.81
TCF3-220ENST00000611869 IGHG4P01861 327 aa10□□□□□ -0.81
TCF3-220ENST00000611869 IGLC6P0CF74 106 aa10□□□□□ -0.81
TCF3-220ENST00000611869 ERG28Q9UKR5 140 aa10□□□□□ -0.81
TCF3-220ENST00000611869 TMEM61Q8N0U2 210 aa9.99□□□□□ -0.81
TCF3-220ENST00000611869 C20orf173Q96LM9 149 aa9.99□□□□□ -0.81
TCF3-220ENST00000611869 MYMXA0A1B0GTQ4 84 aa9.99□□□□□ -0.81
TCF3-220ENST00000611869 M0R2P5 195 aa9.99□□□□□ -0.81
TCF3-220ENST00000611869 RNASE1P07998 156 aaKnown RBP9.99□□□□□ -0.81
TCF3-220ENST00000611869 C11orf68Q9H3H3 251 aaKnown RBP9.98□□□□□ -0.81
TCF3-220ENST00000611869 K7ERJ3 54 aa9.98□□□□□ -0.81
TCF3-220ENST00000611869 MDFICQ9P1T7 246 aa9.98□□□□□ -0.81
TCF3-220ENST00000611869 U3KQE9 123 aa9.98□□□□□ -0.81
TCF3-220ENST00000611869 HIST2H2BCQ6DN03 193 aa9.98□□□□□ -0.81
TCF3-220ENST00000611869 DNAL4O96015 105 aa9.98□□□□□ -0.81
TCF3-220ENST00000611869 SPAG8Q99932 426 aaPredicted RBP9.97□□□□□ -0.81
TCF3-220ENST00000611869 TP73-AS1Q9UF72 201 aa9.97□□□□□ -0.81
TCF3-220ENST00000611869 TSSC4Q9Y5U2 329 aaPredicted RBP9.97□□□□□ -0.81
TCF3-220ENST00000611869 TRBV7-9A0A0J9YWB2 115 aa9.97□□□□□ -0.81
TCF3-220ENST00000611869 A0A0J9YX75 114 aa9.97□□□□□ -0.81
TCF3-220ENST00000611869 AVPP01185 164 aa9.97□□□□□ -0.81
TCF3-220ENST00000611869 MTURNQ8N3F0 131 aa9.97□□□□□ -0.81
TCF3-220ENST00000611869 RPL39P62891 51 aaKnown RBP9.97□□□□□ -0.81
TCF3-220ENST00000611869 WFDC11Q8NEX6 87 aa9.97□□□□□ -0.81
TCF3-220ENST00000611869 SCRT2Q9NQ03 307 aa9.97□□□□□ -0.81
TCF3-220ENST00000611869 TRAV8-2A0A0B4J237 113 aa9.96□□□□□ -0.81
TCF3-220ENST00000611869 IGHV4-31P0DP07 118 aa9.96□□□□□ -0.81
TCF3-220ENST00000611869 ADAMTSL5Q6ZMM2 481 aa9.96□□□□□ -0.81
TCF3-220ENST00000611869 HIST2H2BDQ6DRA6 164 aa9.96□□□□□ -0.81
TCF3-220ENST00000611869 C9orf118A6NHY6 69 aa9.96□□□□□ -0.82
TCF3-220ENST00000611869 LINC00158P58513 81 aa9.96□□□□□ -0.82
TCF3-220ENST00000611869 MRGPRG-AS1Q2M3A8 158 aa9.96□□□□□ -0.82
TCF3-220ENST00000611869 MORN3Q6PF18 240 aaPredicted RBP9.96□□□□□ -0.82
TCF3-220ENST00000611869 TRBV25-1A0A075B6N4 114 aa9.96□□□□□ -0.82
TCF3-220ENST00000611869 CFAP161Q6P656 301 aa9.96□□□□□ -0.82
TCF3-220ENST00000611869 PRIMA1Q86XR5 153 aa9.96□□□□□ -0.82
TCF3-220ENST00000611869 NOP10Q9NPE3 64 aaKnown RBP9.96□□□□□ -0.82
TCF3-220ENST00000611869 MALP21145 153 aa9.95□□□□□ -0.82
TCF3-220ENST00000611869 ZFP2Q6ZN57 461 aa9.95□□□□□ -0.82
TCF3-220ENST00000611869 ZNF843Q8N446 348 aa9.95□□□□□ -0.82
TCF3-220ENST00000611869 TMEM89A2RUT3 159 aa9.95□□□□□ -0.82
TCF3-220ENST00000611869 LINC00310P59036 64 aa9.95□□□□□ -0.82
TCF3-220ENST00000611869 GATD1Q8NB37 220 aa9.95□□□□□ -0.82
TCF3-220ENST00000611869 RASL10AQ92737 203 aa9.95□□□□□ -0.82
TCF3-220ENST00000611869 DLX4Q92988 240 aaPredicted RBP9.95□□□□□ -0.82
TCF3-220ENST00000611869 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.94□□□□□ -0.82
TCF3-220ENST00000611869 IGKV2-29A2NJV5 120 aaPredicted RBP9.94□□□□□ -0.82
TCF3-220ENST00000611869 ZNF292O60281 2723 aa9.94□□□□□ -0.82
TCF3-220ENST00000611869 PTPRBP23467 1997 aa9.94□□□□□ -0.82
TCF3-220ENST00000611869 ANKRD17O75179 2603 aaKnown RBP9.94□□□□□ -0.82
TCF3-220ENST00000611869 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.94□□□□□ -0.82
TCF3-220ENST00000611869 J3QQQ9 107 aa9.94□□□□□ -0.82
TCF3-220ENST00000611869 K7EMI3 77 aa9.94□□□□□ -0.82
TCF3-220ENST00000611869 SRSF2Q01130 221 aaKnown RBP9.94□□□□□ -0.82
TCF3-220ENST00000611869 CELSR3Q9NYQ7 3312 aa9.94□□□□□ -0.82
TCF3-220ENST00000611869 DEFB125Q8N687 156 aa9.93□□□□□ -0.82
TCF3-220ENST00000611869 ZFAND2AQ8N6M9 145 aa9.93□□□□□ -0.82
TCF3-220ENST00000611869 ODF1Q14990 250 aa9.93□□□□□ -0.82
TCF3-220ENST00000611869 F8W735 103 aaPredicted RBP9.93□□□□□ -0.82
TCF3-220ENST00000611869 Q6YL49 198 aa9.93□□□□□ -0.82
TCF3-220ENST00000611869 CEND1Q8N111 149 aa9.93□□□□□ -0.82
TCF3-220ENST00000611869 CLPSL1A2RUU4 121 aa9.93□□□□□ -0.82
TCF3-220ENST00000611869 CITED2Q99967 270 aaPredicted RBP9.93□□□□□ -0.82
TCF3-220ENST00000611869 C11orf21Q9P2W6 132 aa9.93□□□□□ -0.82
TCF3-220ENST00000611869 MRPS12O15235 138 aaKnown RBP9.92□□□□□ -0.82
TCF3-220ENST00000611869 SIVA1O15304 175 aa9.92□□□□□ -0.82
TCF3-220ENST00000611869 RHOHQ15669 191 aa9.92□□□□□ -0.82
TCF3-220ENST00000611869 GAGE6Q13070 117 aa9.92□□□□□ -0.82
TCF3-220ENST00000611869 NDUFA12Q9UI09 145 aa9.92□□□□□ -0.82
TCF3-220ENST00000611869 DNAJC9-AS1A6NH13 148 aa9.91□□□□□ -0.82
TCF3-220ENST00000611869 CST9LQ9H4G1 147 aa9.91□□□□□ -0.82
TCF3-220ENST00000611869 A0A0J9YXV3 536 aa9.91□□□□□ -0.82
TCF3-220ENST00000611869 K7EQG2 157 aa9.91□□□□□ -0.82
TCF3-220ENST00000611869 Q6ZQT7 251 aa9.91□□□□□ -0.82
TCF3-220ENST00000611869 AMTNQ6UX39 209 aa9.91□□□□□ -0.82
TCF3-220ENST00000611869 A0A096LPF7 62 aa9.91□□□□□ -0.82
TCF3-220ENST00000611869 MED14OSP0DP75 135 aa9.91□□□□□ -0.82
TCF3-220ENST00000611869 C6orf226Q5I0X4 101 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms