RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 IGKV3-20P01619 116 aa16.31■□□□□ 0.2
UBE3C-209ENST00000611269 MRAP2Q96G30 205 aa16.31■□□□□ 0.2
UBE3C-209ENST00000611269 NDUFAF3Q9BU61 184 aa16.31■□□□□ 0.2
UBE3C-209ENST00000611269 MAP1LC3CQ9BXW4 147 aa16.31■□□□□ 0.2
UBE3C-209ENST00000611269 PAM16Q9Y3D7 125 aa16.31■□□□□ 0.2
UBE3C-209ENST00000611269 NXT2Q9NPJ8 142 aaKnown RBP16.31■□□□□ 0.2
UBE3C-209ENST00000611269 HLA-DRB4P13762 266 aa16.3■□□□□ 0.2
UBE3C-209ENST00000611269 PET117Q6UWS5 81 aa16.3■□□□□ 0.2
UBE3C-209ENST00000611269 SPATA12Q7Z6I5 190 aa16.3■□□□□ 0.2
UBE3C-209ENST00000611269 HLA-DRB4X5D2U9 266 aa16.3■□□□□ 0.2
UBE3C-209ENST00000611269 GATA1P15976 413 aaPredicted RBP16.29■□□□□ 0.2
UBE3C-209ENST00000611269 CTAG1AP78358 180 aa16.29■□□□□ 0.2
UBE3C-209ENST00000611269 NRACQ8N912 160 aa16.29■□□□□ 0.2
UBE3C-209ENST00000611269 C14orf144Q96I85 54 aa16.29■□□□□ 0.2
UBE3C-209ENST00000611269 DPH3P1Q9H4G8 78 aa16.29■□□□□ 0.2
UBE3C-209ENST00000611269 H3BMM0 161 aa16.29■□□□□ 0.2
UBE3C-209ENST00000611269 SPINK13Q1W4C9 94 aa16.29■□□□□ 0.2
UBE3C-209ENST00000611269 NOTCH1P46531 2555 aa16.28■□□□□ 0.2
UBE3C-209ENST00000611269 TRAV12-2A0A075B6T6 113 aa16.28■□□□□ 0.2
UBE3C-209ENST00000611269 Q8N1Y9 231 aa16.28■□□□□ 0.2
UBE3C-209ENST00000611269 ZMAT5Q9UDW3 170 aaKnown RBP16.28■□□□□ 0.2
UBE3C-209ENST00000611269 C20orf202A1L168 122 aa16.27■□□□□ 0.2
UBE3C-209ENST00000611269 Q8N8P6 123 aa16.27■□□□□ 0.2
UBE3C-209ENST00000611269 NBEAL1Q6ZS30 2694 aa16.27■□□□□ 0.19
UBE3C-209ENST00000611269 SPRY2O43597 315 aa16.27■□□□□ 0.19
UBE3C-209ENST00000611269 HBDP02042 147 aa16.27■□□□□ 0.19
UBE3C-209ENST00000611269 STHQ8IWL8 128 aa16.27■□□□□ 0.19
UBE3C-209ENST00000611269 IGHV3-16A0A0C4DH30 117 aa16.26■□□□□ 0.19
UBE3C-209ENST00000611269 POM121L12Q8N7R1 296 aa16.26■□□□□ 0.19
UBE3C-209ENST00000611269 MIEN1Q9BRT3 115 aa16.26■□□□□ 0.19
UBE3C-209ENST00000611269 DNAH3Q8TD57 4116 aa16.26■□□□□ 0.19
UBE3C-209ENST00000611269 IGLV2-18A0A075B6J9 118 aa16.25■□□□□ 0.19
UBE3C-209ENST00000611269 IGHV1OR15-1A0A075B7D0 117 aa16.25■□□□□ 0.19
UBE3C-209ENST00000611269 TRAV9-2A0A087WT02 112 aa16.25■□□□□ 0.19
UBE3C-209ENST00000611269 SPATA45Q537H7 98 aa16.25■□□□□ 0.19
UBE3C-209ENST00000611269 C14orf178Q8N769 122 aaPredicted RBP16.25■□□□□ 0.19
UBE3C-209ENST00000611269 C9orf85Q96MD7 179 aa16.25■□□□□ 0.19
UBE3C-209ENST00000611269 AP1S3Q96PC3 154 aa16.25■□□□□ 0.19
UBE3C-209ENST00000611269 TRAV26-2A0A0B4J265 109 aa16.25■□□□□ 0.19
UBE3C-209ENST00000611269 RBMY1BA6NDE4 496 aaKnown RBP16.24■□□□□ 0.19
UBE3C-209ENST00000611269 RBMY1EA6NEQ0 496 aaKnown RBP16.24■□□□□ 0.19
UBE3C-209ENST00000611269 RBMY1DP0C7P1 496 aaKnown RBP16.24■□□□□ 0.19
UBE3C-209ENST00000611269 TRPT1Q86TN4 253 aaKnown RBP16.24■□□□□ 0.19
UBE3C-209ENST00000611269 ATOH7Q8N100 152 aa16.24■□□□□ 0.19
UBE3C-209ENST00000611269 KIF25-AS1Q9Y6Z4 181 aa16.24■□□□□ 0.19
UBE3C-209ENST00000611269 FCER1GP30273 86 aa16.22■□□□□ 0.19
UBE3C-209ENST00000611269 LINC01545Q5VT33 79 aa16.22■□□□□ 0.19
UBE3C-209ENST00000611269 ZNF705AQ6ZN79 300 aaPredicted RBP16.22■□□□□ 0.19
UBE3C-209ENST00000611269 RPL35AP18077 110 aaKnown RBP16.21■□□□□ 0.19
UBE3C-209ENST00000611269 LINC00315P59091 139 aa16.21■□□□□ 0.19
UBE3C-209ENST00000611269 CLUHP3Q96NS8 147 aa16.21■□□□□ 0.19
UBE3C-209ENST00000611269 MDFICQ9P1T7 246 aa16.21■□□□□ 0.19
UBE3C-209ENST00000611269 FXYD7P58549 80 aa16.2■□□□□ 0.18
UBE3C-209ENST00000611269 KPRPQ5T749 579 aaPredicted RBP16.2■□□□□ 0.18
UBE3C-209ENST00000611269 C20orf78Q9BR46 151 aa16.2■□□□□ 0.18
UBE3C-209ENST00000611269 PPP1R17O96001 155 aa16.2■□□□□ 0.18
UBE3C-209ENST00000611269 MAJINQ3KP22 176 aa16.2■□□□□ 0.18
UBE3C-209ENST00000611269 RASL10AQ92737 203 aa16.2■□□□□ 0.18
UBE3C-209ENST00000611269 TRGV11A0A075B6L2 103 aa16.19■□□□□ 0.18
UBE3C-209ENST00000611269 IGLC3P0DOY3 106 aa16.19■□□□□ 0.18
UBE3C-209ENST00000611269 SYT8Q8NBV8 401 aa16.18■□□□□ 0.18
UBE3C-209ENST00000611269 RBMY1A1P0DJD3 496 aaKnown RBP16.18■□□□□ 0.18
UBE3C-209ENST00000611269 RBMY1CP0DJD4 496 aa16.18■□□□□ 0.18
UBE3C-209ENST00000611269 SMIM17P0DL12 118 aa16.18■□□□□ 0.18
UBE3C-209ENST00000611269 IGHV4-30-4P0DP06 118 aa16.18■□□□□ 0.18
UBE3C-209ENST00000611269 RBMY1FQ15415 496 aaKnown RBP16.18■□□□□ 0.18
UBE3C-209ENST00000611269 IFI27L1Q96BM0 104 aa16.18■□□□□ 0.18
UBE3C-209ENST00000611269 MUC4Q99102 2169 aa16.18■□□□□ 0.18
UBE3C-209ENST00000611269 PRB2P02812 416 aaPredicted RBP16.17■□□□□ 0.18
UBE3C-209ENST00000611269 MGPP08493 103 aa16.17■□□□□ 0.18
UBE3C-209ENST00000611269 LAGE3Q14657 143 aa16.17■□□□□ 0.18
UBE3C-209ENST00000611269 SMIM2Q9BVW6 85 aa16.17■□□□□ 0.18
UBE3C-209ENST00000611269 UQCR10Q9UDW1 63 aa16.17■□□□□ 0.18
UBE3C-209ENST00000611269 SUMO2P61956 95 aaKnown RBP16.16■□□□□ 0.18
UBE3C-209ENST00000611269 NUTF2P61970 127 aaKnown RBP16.16■□□□□ 0.18
UBE3C-209ENST00000611269 LGALS9BQ3B8N2 356 aa16.16■□□□□ 0.18
UBE3C-209ENST00000611269 LGALS9CQ6DKI2 356 aa16.16■□□□□ 0.18
UBE3C-209ENST00000611269 H0Y8G0 127 aa16.15■□□□□ 0.18
UBE3C-209ENST00000611269 K7EMI3 77 aa16.15■□□□□ 0.18
UBE3C-209ENST00000611269 JPT2Q9H910 190 aa16.14■□□□□ 0.17
UBE3C-209ENST00000611269 ST20Q9HBF5 79 aa16.14■□□□□ 0.17
UBE3C-209ENST00000611269 CBY3A6NI87 242 aa16.14■□□□□ 0.17
UBE3C-209ENST00000611269 LBHQ53QV2 105 aaPredicted RBP16.14■□□□□ 0.17
UBE3C-209ENST00000611269 MRPL52Q86TS9 123 aaKnown RBP16.14■□□□□ 0.17
UBE3C-209ENST00000611269 RPL39LQ96EH5 51 aaKnown RBP16.14■□□□□ 0.17
UBE3C-209ENST00000611269 LINC00467Q9BRT7 94 aa16.14■□□□□ 0.17
UBE3C-209ENST00000611269 XCL2Q9UBD3 114 aa16.14■□□□□ 0.17
UBE3C-209ENST00000611269 GIG44P09565 113 aaPredicted RBP16.13■□□□□ 0.17
UBE3C-209ENST00000611269 RPL32P62910 135 aaKnown RBP16.12■□□□□ 0.17
UBE3C-209ENST00000611269 MORN3Q6PF18 240 aaPredicted RBP16.12■□□□□ 0.17
UBE3C-209ENST00000611269 HSBP1L1C9JCN9 74 aa16.12■□□□□ 0.17
UBE3C-209ENST00000611269 TCAPO15273 167 aa16.12■□□□□ 0.17
UBE3C-209ENST00000611269 hDV102S1A0JD36 115 aa16.11■□□□□ 0.17
UBE3C-209ENST00000611269 PMCHL2Q9BQD1 86 aa16.11■□□□□ 0.17
UBE3C-209ENST00000611269 CSTL1Q9H114 145 aa16.11■□□□□ 0.17
UBE3C-209ENST00000611269 A0A087WWL8 130 aa16.1■□□□□ 0.17
UBE3C-209ENST00000611269 CRYGDP07320 174 aa16.1■□□□□ 0.17
UBE3C-209ENST00000611269 ORMDL2Q53FV1 153 aa16.1■□□□□ 0.17
UBE3C-209ENST00000611269 SUMO4Q6EEV6 95 aa16.1■□□□□ 0.17
UBE3C-209ENST00000611269 A8MZ25 164 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms