RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 CKS1BP61024 79 aa5.54□□□□□ -1.52
CSDE1-218ENST00000610726 PMVKQ15126 192 aa5.54□□□□□ -1.52
CSDE1-218ENST00000610726 MAJINQ3KP22 176 aa5.54□□□□□ -1.52
CSDE1-218ENST00000610726 Q6ZSV7 163 aa5.54□□□□□ -1.52
CSDE1-218ENST00000610726 PLEKHB2Q96CS7 222 aa5.54□□□□□ -1.52
CSDE1-218ENST00000610726 DKK2Q9UBU2 259 aa5.54□□□□□ -1.52
CSDE1-218ENST00000610726 A0A0J9YY99 117 aa5.54□□□□□ -1.52
CSDE1-218ENST00000610726 C19orf71A6NCJ1 209 aa5.54□□□□□ -1.52
CSDE1-218ENST00000610726 LINC00173Q6ZV60 143 aa5.54□□□□□ -1.52
CSDE1-218ENST00000610726 PRIMA1Q86XR5 153 aa5.54□□□□□ -1.52
CSDE1-218ENST00000610726 C4orf3Q8WVX3 66 aa5.54□□□□□ -1.52
CSDE1-218ENST00000610726 VWC2LB2RUY7 222 aa5.54□□□□□ -1.52
CSDE1-218ENST00000610726 ESDP10768 282 aa5.54□□□□□ -1.52
CSDE1-218ENST00000610726 MORN3Q6PF18 240 aaPredicted RBP5.54□□□□□ -1.52
CSDE1-218ENST00000610726 TMEM86BQ8N661 226 aa5.54□□□□□ -1.52
CSDE1-218ENST00000610726 C20orf78Q9BR46 151 aa5.54□□□□□ -1.52
CSDE1-218ENST00000610726 ZNF747Q9BV97 191 aa5.54□□□□□ -1.52
CSDE1-218ENST00000610726 ZFAND3Q9H8U3 227 aa5.54□□□□□ -1.52
CSDE1-218ENST00000610726 F8P00451 2351 aa5.53□□□□□ -1.52
CSDE1-218ENST00000610726 A0A0J9YX75 114 aa5.53□□□□□ -1.52
CSDE1-218ENST00000610726 COA6Q5JTJ3 125 aaKnown RBP5.53□□□□□ -1.52
CSDE1-218ENST00000610726 C9orf66Q5T8R8 295 aa5.53□□□□□ -1.52
CSDE1-218ENST00000610726 PIFOQ8TCI5 191 aa5.53□□□□□ -1.52
CSDE1-218ENST00000610726 ZNF479Q96JC4 524 aa5.53□□□□□ -1.52
CSDE1-218ENST00000610726 C20orf144Q9BQM9 153 aa5.53□□□□□ -1.52
CSDE1-218ENST00000610726 TMEM238C9JI98 176 aa5.53□□□□□ -1.52
CSDE1-218ENST00000610726 IGLC3P0DOY3 106 aa5.53□□□□□ -1.52
CSDE1-218ENST00000610726 PLA2G2AP14555 144 aa5.53□□□□□ -1.52
CSDE1-218ENST00000610726 JPT2Q9H910 190 aa5.53□□□□□ -1.52
CSDE1-218ENST00000610726 ESM1Q9NQ30 184 aa5.53□□□□□ -1.52
CSDE1-218ENST00000610726 MDFICQ9P1T7 246 aa5.53□□□□□ -1.52
CSDE1-218ENST00000610726 UBE2DNLQ8IWF7 75 aa5.53□□□□□ -1.52
CSDE1-218ENST00000610726 RASL10AQ92737 203 aa5.53□□□□□ -1.52
CSDE1-218ENST00000610726 TMEM243Q9BU79 118 aa5.53□□□□□ -1.52
CSDE1-218ENST00000610726 RAI1Q7Z5J4 1906 aaPredicted RBP5.53□□□□□ -1.52
CSDE1-218ENST00000610726 EREGO14944 169 aa5.52□□□□□ -1.53
CSDE1-218ENST00000610726 CD5LO43866 347 aa5.52□□□□□ -1.53
CSDE1-218ENST00000610726 MYCNOSP40205 109 aa5.52□□□□□ -1.53
CSDE1-218ENST00000610726 SUMO4Q6EEV6 95 aa5.52□□□□□ -1.53
CSDE1-218ENST00000610726 MLST8Q9BVC4 326 aa5.52□□□□□ -1.53
CSDE1-218ENST00000610726 MRPS16Q9Y3D3 137 aaKnown RBP5.52□□□□□ -1.53
CSDE1-218ENST00000610726 F8VRH5 84 aa5.52□□□□□ -1.53
CSDE1-218ENST00000610726 PAX4O43316 350 aa5.52□□□□□ -1.53
CSDE1-218ENST00000610726 KLF5Q13887 457 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-218ENST00000610726 LGALS9BQ3B8N2 356 aa5.52□□□□□ -1.53
CSDE1-218ENST00000610726 LGALS9CQ6DKI2 356 aa5.52□□□□□ -1.53
CSDE1-218ENST00000610726 ZNF493Q6ZR52 646 aa5.52□□□□□ -1.53
CSDE1-218ENST00000610726 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-218ENST00000610726 IGKV2-29A2NJV5 120 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-218ENST00000610726 DEFB4AO15263 64 aa5.52□□□□□ -1.53
CSDE1-218ENST00000610726 TMEM141Q96I45 108 aa5.52□□□□□ -1.53
CSDE1-218ENST00000610726 KIR3DS1Q14943 382 aa5.52□□□□□ -1.53
CSDE1-218ENST00000610726 CLPSL2Q6UWE3 100 aa5.52□□□□□ -1.53
CSDE1-218ENST00000610726 SMAD5-AS1Q9Y6J3 95 aa5.52□□□□□ -1.53
CSDE1-218ENST00000610726 PRSS29PA6NIE9 313 aa5.51□□□□□ -1.53
CSDE1-218ENST00000610726 SS18Q15532 418 aa5.51□□□□□ -1.53
CSDE1-218ENST00000610726 C20orf173Q96LM9 149 aa5.51□□□□□ -1.53
CSDE1-218ENST00000610726 SMR3AQ99954 134 aa5.51□□□□□ -1.53
CSDE1-218ENST00000610726 PCSK5Q92824 1860 aa5.51□□□□□ -1.53
CSDE1-218ENST00000610726 ZNF124Q15973 351 aa5.51□□□□□ -1.53
CSDE1-218ENST00000610726 DEFB135Q30KP9 77 aa5.51□□□□□ -1.53
CSDE1-218ENST00000610726 SAMD5Q5TGI4 173 aa5.51□□□□□ -1.53
CSDE1-218ENST00000610726 CTRLP40313 264 aa5.51□□□□□ -1.53
CSDE1-218ENST00000610726 TDRG1Q3Y452 100 aa5.51□□□□□ -1.53
CSDE1-218ENST00000610726 MAP6D1Q9H9H5 199 aa5.51□□□□□ -1.53
CSDE1-218ENST00000610726 ERG28Q9UKR5 140 aa5.51□□□□□ -1.53
CSDE1-218ENST00000610726 DSPP15924 2871 aaKnown RBP5.51□□□□□ -1.53
CSDE1-218ENST00000610726 MYMXA0A1B0GTQ4 84 aa5.5□□□□□ -1.53
CSDE1-218ENST00000610726 K7EQG2 157 aa5.5□□□□□ -1.53
CSDE1-218ENST00000610726 PSMB8P28062 276 aa5.5□□□□□ -1.53
CSDE1-218ENST00000610726 C18orf65Q6ZTR6 163 aa5.5□□□□□ -1.53
CSDE1-218ENST00000610726 DEFB125Q8N687 156 aa5.5□□□□□ -1.53
CSDE1-218ENST00000610726 LY6G6DO95868 133 aa5.5□□□□□ -1.53
CSDE1-218ENST00000610726 PAX2Q02962 417 aa5.5□□□□□ -1.53
CSDE1-218ENST00000610726 RHOHQ15669 191 aa5.5□□□□□ -1.53
CSDE1-218ENST00000610726 SNHG12Q9BXW3 62 aa5.5□□□□□ -1.53
CSDE1-218ENST00000610726 ZNF702PQ9H963 129 aa5.5□□□□□ -1.53
CSDE1-218ENST00000610726 LAMA1P25391 3075 aa5.5□□□□□ -1.53
CSDE1-218ENST00000610726 MAP1AP78559 2803 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-218ENST00000610726 PTPRBP23467 1997 aa5.5□□□□□ -1.53
CSDE1-218ENST00000610726 TRAV25A0A0B4J276 109 aa5.5□□□□□ -1.53
CSDE1-218ENST00000610726 TRBV6-1A0A0K0K1D8 114 aa5.5□□□□□ -1.53
CSDE1-218ENST00000610726 TP53TG3Q9ULZ0 132 aa5.5□□□□□ -1.53
CSDE1-218ENST00000610726 VCANP13611 3396 aa5.5□□□□□ -1.53
CSDE1-218ENST00000610726 RBMY1BA6NDE4 496 aaKnown RBP5.5□□□□□ -1.53
CSDE1-218ENST00000610726 RBMY1EA6NEQ0 496 aaKnown RBP5.5□□□□□ -1.53
CSDE1-218ENST00000610726 ANGP03950 147 aaKnown RBP5.5□□□□□ -1.53
CSDE1-218ENST00000610726 RBMY1DP0C7P1 496 aaKnown RBP5.5□□□□□ -1.53
CSDE1-218ENST00000610726 RBMY1A1P0DJD3 496 aaKnown RBP5.5□□□□□ -1.53
CSDE1-218ENST00000610726 RBMY1CP0DJD4 496 aa5.5□□□□□ -1.53
CSDE1-218ENST00000610726 PFN2P35080 140 aa5.5□□□□□ -1.53
CSDE1-218ENST00000610726 CRIP1P50238 77 aa5.5□□□□□ -1.53
CSDE1-218ENST00000610726 DEFB114Q30KQ6 69 aa5.5□□□□□ -1.53
CSDE1-218ENST00000610726 GDF5OSQ5U4N7 250 aa5.5□□□□□ -1.53
CSDE1-218ENST00000610726 CRLF1O75462 422 aa5.49□□□□□ -1.53
CSDE1-218ENST00000610726 RPL39P62891 51 aaKnown RBP5.49□□□□□ -1.53
CSDE1-218ENST00000610726 LINC01006Q8NI28 216 aa5.49□□□□□ -1.53
CSDE1-218ENST00000610726 COX8AP10176 69 aa5.49□□□□□ -1.53
CSDE1-218ENST00000610726 PSMG3-AS1Q96PY0 264 aa5.49□□□□□ -1.53
CSDE1-218ENST00000610726 PGPEP1Q9NXJ5 209 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms