RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 TIMD4Q96H15 378 aa11.69□□□□□ -0.54
RER1-209ENST00000605895 J3QQQ9 107 aa11.68□□□□□ -0.54
RER1-209ENST00000605895 ZNF883P0CG24 379 aa11.68□□□□□ -0.54
RER1-209ENST00000605895 DPH3P1Q9H4G8 78 aa11.68□□□□□ -0.54
RER1-209ENST00000605895 HRNRQ86YZ3 2850 aaPredicted RBP11.68□□□□□ -0.54
RER1-209ENST00000605895 IGHV7-81A0A0B4J1V7 117 aa11.68□□□□□ -0.54
RER1-209ENST00000605895 RNF223E7ERA6 249 aa11.68□□□□□ -0.54
RER1-209ENST00000605895 MEIG1Q5JSS6 88 aa11.68□□□□□ -0.54
RER1-209ENST00000605895 TRAV8-4A0A0B4J246 113 aa11.67□□□□□ -0.54
RER1-209ENST00000605895 ZNF56Q15929 161 aa11.67□□□□□ -0.54
RER1-209ENST00000605895 VCX2Q9H322 139 aa11.67□□□□□ -0.54
RER1-209ENST00000605895 ZFAND3Q9H8U3 227 aa11.67□□□□□ -0.54
RER1-209ENST00000605895 RNASE13Q5GAN3 156 aaKnown RBP11.67□□□□□ -0.54
RER1-209ENST00000605895 SLC25A29Q8N8R3 303 aa11.67□□□□□ -0.54
RER1-209ENST00000605895 ATP6V0E1O15342 81 aa11.66□□□□□ -0.54
RER1-209ENST00000605895 ASIPP42127 132 aa11.66□□□□□ -0.54
RER1-209ENST00000605895 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.66□□□□□ -0.54
RER1-209ENST00000605895 IGKV3-20P01619 116 aa11.66□□□□□ -0.54
RER1-209ENST00000605895 IGHV3-33P01772 117 aa11.66□□□□□ -0.54
RER1-209ENST00000605895 GRNP28799 593 aaKnown RBP11.66□□□□□ -0.54
RER1-209ENST00000605895 SRSF2Q01130 221 aaKnown RBP11.66□□□□□ -0.54
RER1-209ENST00000605895 LINC00477Q96M19 166 aa11.66□□□□□ -0.54
RER1-209ENST00000605895 ODF3Q96PU9 254 aa11.66□□□□□ -0.54
RER1-209ENST00000605895 RBAKDNA6NC62 111 aa11.65□□□□□ -0.54
RER1-209ENST00000605895 LINC01619G3V211 115 aa11.65□□□□□ -0.54
RER1-209ENST00000605895 CCDC140Q96MF4 163 aa11.65□□□□□ -0.54
RER1-209ENST00000605895 PRR30Q53SZ7 412 aaPredicted RBP11.65□□□□□ -0.54
RER1-209ENST00000605895 Q6ZS92 163 aa11.65□□□□□ -0.54
RER1-209ENST00000605895 CLEC2BQ92478 149 aa11.65□□□□□ -0.54
RER1-209ENST00000605895 A8MZ25 164 aa11.65□□□□□ -0.55
RER1-209ENST00000605895 PMVKQ15126 192 aa11.65□□□□□ -0.55
RER1-209ENST00000605895 NPBQ8NG41 125 aa11.65□□□□□ -0.55
RER1-209ENST00000605895 FAM57AQ8TBR7 257 aa11.65□□□□□ -0.55
RER1-209ENST00000605895 METTL26Q96S19 204 aa11.65□□□□□ -0.55
RER1-209ENST00000605895 LINC01620Q4KN68 170 aa11.64□□□□□ -0.55
RER1-209ENST00000605895 GPHB5Q86YW7 130 aa11.64□□□□□ -0.55
RER1-209ENST00000605895 RNF5Q99942 180 aa11.64□□□□□ -0.55
RER1-209ENST00000605895 SPXQ9BT56 116 aa11.64□□□□□ -0.55
RER1-209ENST00000605895 IGHV3OR16-10A0A075B7F0 116 aa11.63□□□□□ -0.55
RER1-209ENST00000605895 VMO1Q7Z5L0 202 aa11.63□□□□□ -0.55
RER1-209ENST00000605895 TMEM219Q86XT9 240 aa11.63□□□□□ -0.55
RER1-209ENST00000605895 CSMD2Q7Z408 3487 aa11.63□□□□□ -0.55
RER1-209ENST00000605895 C2orf82Q6UX34 121 aa11.63□□□□□ -0.55
RER1-209ENST00000605895 SBSPONQ8IVN8 264 aa11.63□□□□□ -0.55
RER1-209ENST00000605895 PRRC2AP48634 2157 aaKnown RBP11.63□□□□□ -0.55
RER1-209ENST00000605895 BRI3O95415 125 aa11.62□□□□□ -0.55
RER1-209ENST00000605895 TRBV12-3P01733 135 aa11.62□□□□□ -0.55
RER1-209ENST00000605895 IGHV3-11P01762 117 aa11.62□□□□□ -0.55
RER1-209ENST00000605895 DEFB123Q8N688 67 aa11.62□□□□□ -0.55
RER1-209ENST00000605895 VPS13CQ709C8 3753 aa11.62□□□□□ -0.55
RER1-209ENST00000605895 CSPG4Q6UVK1 2322 aa11.62□□□□□ -0.55
RER1-209ENST00000605895 TRIAP1O43715 76 aa11.62□□□□□ -0.55
RER1-209ENST00000605895 FOXC1Q12948 553 aa11.62□□□□□ -0.55
RER1-209ENST00000605895 DAND5Q8N907 189 aa11.62□□□□□ -0.55
RER1-209ENST00000605895 CRYBG3Q68DQ2 2970 aa11.62□□□□□ -0.55
RER1-209ENST00000605895 A0A0J9YXV3 536 aa11.62□□□□□ -0.55
RER1-209ENST00000605895 SDHAF1A6NFY7 115 aa11.62□□□□□ -0.55
RER1-209ENST00000605895 UNQ9165/PRO28630Q6UXU0 137 aa11.62□□□□□ -0.55
RER1-209ENST00000605895 ZFAND2AQ8N6M9 145 aa11.62□□□□□ -0.55
RER1-209ENST00000605895 TMEM263Q8WUH6 116 aaKnown RBP11.62□□□□□ -0.55
RER1-209ENST00000605895 A0A0U1RRA0 63 aa11.61□□□□□ -0.55
RER1-209ENST00000605895 IGIPA6NJ69 53 aa11.61□□□□□ -0.55
RER1-209ENST00000605895 TRAV8-3A0A0A6YYJ7 113 aa11.61□□□□□ -0.55
RER1-209ENST00000605895 CEMP1Q6PRD7 247 aaPredicted RBP11.61□□□□□ -0.55
RER1-209ENST00000605895 AMELXQ99217 191 aa11.61□□□□□ -0.55
RER1-209ENST00000605895 RNASE3P12724 160 aaKnown RBP11.6□□□□□ -0.55
RER1-209ENST00000605895 ZNF22P17026 224 aaPredicted RBP11.6□□□□□ -0.55
RER1-209ENST00000605895 SUMO4Q6EEV6 95 aa11.6□□□□□ -0.55
RER1-209ENST00000605895 TRAV12-3A0A0B4J271 114 aa11.6□□□□□ -0.55
RER1-209ENST00000605895 CD3EP07766 207 aa11.6□□□□□ -0.55
RER1-209ENST00000605895 C9orf47Q6ZRZ4 202 aa11.6□□□□□ -0.55
RER1-209ENST00000605895 OR10J6PQ8NGY7 276 aa11.6□□□□□ -0.55
RER1-209ENST00000605895 H3BMM0 161 aa11.6□□□□□ -0.55
RER1-209ENST00000605895 Q8N9W7 124 aa11.6□□□□□ -0.55
RER1-209ENST00000605895 UBE2WQ96B02 151 aa11.6□□□□□ -0.55
RER1-209ENST00000605895 IGHV4-4A0A075B6R2 117 aa11.59□□□□□ -0.55
RER1-209ENST00000605895 TRAV21A0A0B4J279 112 aa11.59□□□□□ -0.55
RER1-209ENST00000605895 HTN1P15515 57 aa11.59□□□□□ -0.55
RER1-209ENST00000605895 UBE2E1P51965 193 aa11.59□□□□□ -0.55
RER1-209ENST00000605895 ATXN8Q156A1 80 aa11.59□□□□□ -0.55
RER1-209ENST00000605895 PPDPFQ9H3Y8 114 aa11.59□□□□□ -0.55
RER1-209ENST00000605895 IGHV3-73A0A0B4J1V6 119 aa11.59□□□□□ -0.55
RER1-209ENST00000605895 PLA2G2CQ5R387 149 aa11.58□□□□□ -0.56
RER1-209ENST00000605895 EEF1AKMT3Q96AZ1 226 aa11.58□□□□□ -0.56
RER1-209ENST00000605895 EDN2P20800 178 aa11.58□□□□□ -0.56
RER1-209ENST00000605895 TRAV12-2A0A075B6T6 113 aa11.57□□□□□ -0.56
RER1-209ENST00000605895 B9A039 149 aa11.57□□□□□ -0.56
RER1-209ENST00000605895 PTPRQQ9UMZ3 2332 aa11.57□□□□□ -0.56
RER1-209ENST00000605895 ID1P41134 155 aa11.56□□□□□ -0.56
RER1-209ENST00000605895 TMEM190Q8WZ59 177 aa11.56□□□□□ -0.56
RER1-209ENST00000605895 ZFP36P26651 326 aaKnown RBP11.56□□□□□ -0.56
RER1-209ENST00000605895 ADAMTSL4-AS1Q5T5F5 129 aa11.56□□□□□ -0.56
RER1-209ENST00000605895 FAM110AQ9BQ89 295 aa11.56□□□□□ -0.56
RER1-209ENST00000605895 H7C423 109 aa11.55□□□□□ -0.56
RER1-209ENST00000605895 IGF2RP11717 2491 aa11.55□□□□□ -0.56
RER1-209ENST00000605895 RS1O15537 224 aa11.55□□□□□ -0.56
RER1-209ENST00000605895 MRPL23Q16540 153 aaKnown RBP11.55□□□□□ -0.56
RER1-209ENST00000605895 ZNF876PQ49A33 203 aa11.55□□□□□ -0.56
RER1-209ENST00000605895 DUX5Q96PT3 197 aa11.55□□□□□ -0.56
RER1-209ENST00000605895 ZNF292O60281 2723 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms