RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 GAGE5Q13069 117 aa12.23□□□□□ -0.45
CCDC12-213ENST00000605875 GAGE13Q4V321 117 aa12.23□□□□□ -0.45
CCDC12-213ENST00000605875 FAM74A4Q5TZK3 123 aa12.23□□□□□ -0.45
CCDC12-213ENST00000605875 TCTE3Q8IZS6 198 aa12.23□□□□□ -0.45
CCDC12-213ENST00000605875 C10orf126Q8N4M7 172 aa12.23□□□□□ -0.45
CCDC12-213ENST00000605875 C14orf178Q8N769 122 aaPredicted RBP12.23□□□□□ -0.45
CCDC12-213ENST00000605875 PHLDA3Q9Y5J5 127 aa12.23□□□□□ -0.45
CCDC12-213ENST00000605875 VPS13BQ7Z7G8 4022 aa12.23□□□□□ -0.45
CCDC12-213ENST00000605875 TRAV8-6A0A0B4J262 113 aa12.22□□□□□ -0.45
CCDC12-213ENST00000605875 SMR3BP02814 79 aaPredicted RBP12.22□□□□□ -0.45
CCDC12-213ENST00000605875 S100A9P06702 114 aaKnown RBP12.22□□□□□ -0.45
CCDC12-213ENST00000605875 LINC01556Q5JQF7 62 aa12.22□□□□□ -0.45
CCDC12-213ENST00000605875 LELP1Q5T871 98 aa12.22□□□□□ -0.45
CCDC12-213ENST00000605875 ATP6V0E2Q8NHE4 81 aa12.22□□□□□ -0.45
CCDC12-213ENST00000605875 GTSF1LQ9H1H1 148 aa12.22□□□□□ -0.45
CCDC12-213ENST00000605875 GNG13Q9P2W3 67 aa12.22□□□□□ -0.45
CCDC12-213ENST00000605875 A0A087WWL8 130 aa12.21□□□□□ -0.45
CCDC12-213ENST00000605875 RHODO00212 210 aa12.21□□□□□ -0.45
CCDC12-213ENST00000605875 CCL20P78556 96 aa12.21□□□□□ -0.45
CCDC12-213ENST00000605875 PRR27Q6MZM9 219 aa12.21□□□□□ -0.45
CCDC12-213ENST00000605875 MANBALQ9NQG1 85 aa12.21□□□□□ -0.45
CCDC12-213ENST00000605875 IGHV3-30P01768 117 aa12.2□□□□□ -0.46
CCDC12-213ENST00000605875 IGHV3-33P01772 117 aa12.2□□□□□ -0.46
CCDC12-213ENST00000605875 IGHV3-30-3P0DP02 117 aa12.2□□□□□ -0.46
CCDC12-213ENST00000605875 IGHV3-30-5P0DP03 117 aa12.2□□□□□ -0.46
CCDC12-213ENST00000605875 BAGE2Q86Y30 109 aa12.2□□□□□ -0.46
CCDC12-213ENST00000605875 ZFP82Q8N141 532 aa12.2□□□□□ -0.46
CCDC12-213ENST00000605875 DERL1Q9BUN8 251 aa12.2□□□□□ -0.46
CCDC12-213ENST00000605875 MLST8Q9BVC4 326 aa12.2□□□□□ -0.46
CCDC12-213ENST00000605875 Q9UF83 564 aa12.2□□□□□ -0.46
CCDC12-213ENST00000605875 RPL35P42766 123 aaKnown RBP12.19□□□□□ -0.46
CCDC12-213ENST00000605875 EIF5AL1Q6IS14 154 aaKnown RBP12.19□□□□□ -0.46
CCDC12-213ENST00000605875 SFRP2Q96HF1 295 aa12.19□□□□□ -0.46
CCDC12-213ENST00000605875 FAM229AH3BQW9 127 aa12.18□□□□□ -0.46
CCDC12-213ENST00000605875 RAB5CP51148 216 aa12.18□□□□□ -0.46
CCDC12-213ENST00000605875 HAMPP81172 84 aa12.18□□□□□ -0.46
CCDC12-213ENST00000605875 Q8N3U1 123 aa12.18□□□□□ -0.46
CCDC12-213ENST00000605875 Q9HAA7 133 aa12.18□□□□□ -0.46
CCDC12-213ENST00000605875 TRAV1-1A0A0B4J248 108 aa12.17□□□□□ -0.46
CCDC12-213ENST00000605875 C1QBP02746 253 aa12.17□□□□□ -0.46
CCDC12-213ENST00000605875 SULT1A2P50226 295 aa12.17□□□□□ -0.46
CCDC12-213ENST00000605875 OR10AG1Q8NH19 301 aa12.17□□□□□ -0.46
CCDC12-213ENST00000605875 C11orf52Q96A22 123 aa12.17□□□□□ -0.46
CCDC12-213ENST00000605875 MYCBP2O75592 4640 aa12.16□□□□□ -0.46
CCDC12-213ENST00000605875 hCG_2014768A0A024R1R8 64 aa12.16□□□□□ -0.46
CCDC12-213ENST00000605875 IGLV5-52A0A0A0MRZ9 124 aa12.16□□□□□ -0.46
CCDC12-213ENST00000605875 PSCAO43653 123 aa12.16□□□□□ -0.46
CCDC12-213ENST00000605875 CXCL1P09341 107 aa12.16□□□□□ -0.46
CCDC12-213ENST00000605875 CENPWQ5EE01 88 aa12.16□□□□□ -0.46
CCDC12-213ENST00000605875 Q6ZNX1 250 aa12.16□□□□□ -0.46
CCDC12-213ENST00000605875 FLG2Q5D862 2391 aaPredicted RBP12.16□□□□□ -0.46
CCDC12-213ENST00000605875 IBA57-AS1B1ANH7 110 aa12.15□□□□□ -0.46
CCDC12-213ENST00000605875 TEX46H3BTG2 121 aa12.15□□□□□ -0.46
CCDC12-213ENST00000605875 SLC51BQ86UW2 128 aa12.15□□□□□ -0.46
CCDC12-213ENST00000605875 MUC21A0A0G2JKD1 596 aa12.14□□□□□ -0.47
CCDC12-213ENST00000605875 MUC21A0A140T8X8 626 aa12.14□□□□□ -0.47
CCDC12-213ENST00000605875 LRCOL1A6NCL2 159 aa12.14□□□□□ -0.47
CCDC12-213ENST00000605875 AKAP14Q86UN6 197 aa12.14□□□□□ -0.47
CCDC12-213ENST00000605875 NTN5Q8WTR8 489 aaPredicted RBP12.14□□□□□ -0.47
CCDC12-213ENST00000605875 TMEM70Q9BUB7 260 aa12.14□□□□□ -0.47
CCDC12-213ENST00000605875 BOLA1Q9Y3E2 137 aa12.14□□□□□ -0.47
CCDC12-213ENST00000605875 SNAI2O43623 268 aa12.13□□□□□ -0.47
CCDC12-213ENST00000605875 IFNA1P01562 189 aa12.13□□□□□ -0.47
CCDC12-213ENST00000605875 ZNF56Q15929 161 aa12.13□□□□□ -0.47
CCDC12-213ENST00000605875 MEF2BQ02080 365 aaPredicted RBP12.12□□□□□ -0.47
CCDC12-213ENST00000605875 LAGE3Q14657 143 aa12.12□□□□□ -0.47
CCDC12-213ENST00000605875 IGLV2-8P01709 118 aa12.11□□□□□ -0.47
CCDC12-213ENST00000605875 BCL2P10415 239 aa12.11□□□□□ -0.47
CCDC12-213ENST00000605875 SSTP61278 116 aa12.11□□□□□ -0.47
CCDC12-213ENST00000605875 SPANXN1Q5VSR9 72 aa12.11□□□□□ -0.47
CCDC12-213ENST00000605875 C9orf62Q8N4C0 152 aa12.11□□□□□ -0.47
CCDC12-213ENST00000605875 DNAH8Q96JB1 4490 aa12.11□□□□□ -0.47
CCDC12-213ENST00000605875 A0A087WWC5 75 aa12.1□□□□□ -0.47
CCDC12-213ENST00000605875 TRBV10-1A0A0K0K1A3 114 aa12.1□□□□□ -0.47
CCDC12-213ENST00000605875 RAB19A4D1S5 217 aa12.1□□□□□ -0.47
CCDC12-213ENST00000605875 PDE6DO43924 150 aa12.1□□□□□ -0.47
CCDC12-213ENST00000605875 OR5AL1P0C617 328 aa12.1□□□□□ -0.47
CCDC12-213ENST00000605875 GZMBP10144 247 aa12.1□□□□□ -0.47
CCDC12-213ENST00000605875 GNG4P50150 75 aa12.1□□□□□ -0.47
CCDC12-213ENST00000605875 RPL36AP83881 106 aaKnown RBP12.1□□□□□ -0.47
CCDC12-213ENST00000605875 Q8N814 137 aa12.1□□□□□ -0.47
CCDC12-213ENST00000605875 RPL36ALQ969Q0 106 aaKnown RBP12.1□□□□□ -0.47
CCDC12-213ENST00000605875 TPPP3Q9BW30 176 aa12.1□□□□□ -0.47
CCDC12-213ENST00000605875 SSBP4Q9BWG4 385 aaPredicted RBP12.1□□□□□ -0.47
CCDC12-213ENST00000605875 UBE2D3P61077 147 aa12.09□□□□□ -0.47
CCDC12-213ENST00000605875 UBE2D2P62837 147 aa12.09□□□□□ -0.47
CCDC12-213ENST00000605875 DAZ4Q86SG3 579 aaKnown RBP12.09□□□□□ -0.47
CCDC12-213ENST00000605875 DAZ3Q9NR90 486 aaKnown RBP12.09□□□□□ -0.47
CCDC12-213ENST00000605875 TRBV20OR9-2A0A075B6H5 130 aa12.08□□□□□ -0.48
CCDC12-213ENST00000605875 RAB4BP61018 213 aa12.08□□□□□ -0.48
CCDC12-213ENST00000605875 AP1S3Q96PC3 154 aa12.08□□□□□ -0.48
CCDC12-213ENST00000605875 MED9Q9NWA0 146 aa12.08□□□□□ -0.48
CCDC12-213ENST00000605875 SRRM2Q9UQ35 2752 aaKnown RBP12.08□□□□□ -0.48
CCDC12-213ENST00000605875 TRBV7-3A0A075B6L6 115 aa12.07□□□□□ -0.48
CCDC12-213ENST00000605875 C19orf71A6NCJ1 209 aa12.07□□□□□ -0.48
CCDC12-213ENST00000605875 RBFOX3A6NFN3 312 aa12.07□□□□□ -0.48
CCDC12-213ENST00000605875 J3QL48 77 aa12.07□□□□□ -0.48
CCDC12-213ENST00000605875 NIT1Q86X76 327 aa12.07□□□□□ -0.48
CCDC12-213ENST00000605875 NEXN-AS1Q8NBZ9 246 aa12.07□□□□□ -0.48
CCDC12-213ENST00000605875 OR2D3Q8NGH3 330 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms