RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 IL15RAQ13261 267 aa9.7□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 CLPSL2Q6UWE3 100 aa9.7□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 PRNTQ86SH4 94 aa9.7□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.7□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 SEC22CQ9BRL7 303 aa9.7□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 PLAC8Q9NZF1 115 aa9.7□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 IL36BQ9NZH7 164 aa9.7□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 A0A1W2PPV4 95 aa9.69□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 TCRAP04437 139 aa9.69□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 PRR3P79522 188 aaKnown RBP9.69□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 FLI1Q01543 452 aaPredicted RBP9.69□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 OR11H4Q8NGC9 324 aa9.69□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 TRAV6A0A075B6T7 132 aa9.68□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 IGKV3D-20A0A0C4DH25 116 aa9.68□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 H3BVH4 76 aa9.68□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 PTTG1O95997 202 aa9.68□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 SAPCD1Q5SSQ6 148 aa9.68□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 SPINK6Q6UWN8 80 aa9.68□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 C5orf17Q8NAS9 161 aa9.68□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 LINC00269Q8N2A0 174 aa9.67□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 SCGB1C1Q8TD33 95 aa9.67□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 A0A0U1RQV1 116 aa9.66□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 ARMS2P0C7Q2 107 aa9.66□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 SFRP2Q96HF1 295 aa9.66□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 PRR34Q9NV39 138 aa9.66□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 PHLDA3Q9Y5J5 127 aa9.66□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 IGLV10-54A0A075B6I4 117 aa9.65□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 KRTAP9-6A0A140TA67 174 aa9.65□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 FABP5P3A8MUU1 101 aa9.65□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 B4DEV8 164 aa9.65□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 HMGB3O15347 200 aaKnown RBP9.65□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 TCRBP04435 133 aa9.65□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 LRRC37A5PQ49AS3 106 aa9.65□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 NUDT15Q9NV35 164 aa9.65□□□□□ -0.86
NEDD8-MDP1-204ENST00000605847 CCDC160A6NGH7 325 aa9.64□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 M0R381 172 aa9.64□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 MAJINQ3KP22 176 aa9.64□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 KRTAP26-1Q6PEX3 210 aa9.64□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 OR10G8Q8NGN5 311 aa9.64□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 LYPD6BQ8NI32 183 aa9.64□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 IL7P13232 177 aa9.63□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 TPT1P13693 172 aaKnown RBP9.63□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 RBX1P62877 108 aa9.63□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 IGKV2-24A0A0C4DH68 120 aa9.62□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 LYRM1O43325 122 aa9.62□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 ARL14EPLP0DKL9 152 aa9.62□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 SUMO1P63165 101 aaKnown RBP9.62□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 COX6A2Q02221 97 aa9.62□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 REG3AQ06141 175 aa9.62□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 GAGE6Q13070 117 aa9.62□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 TMEM97Q5BJF2 176 aa9.62□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 EPDR1Q9UM22 224 aa9.62□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 LPAP08519 4548 aa9.62□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 GRIFINA4D1Z8 144 aa9.61□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 M0R036 132 aa9.61□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 SLPIP03973 132 aa9.61□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 ZFP82Q8N141 532 aa9.61□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 STPG4Q8N801 248 aa9.61□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 NEXN-AS1Q8NBZ9 246 aa9.61□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 SDHCQ99643 169 aaPredicted RBP9.61□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 TRAV8-4A0A0B4J246 113 aa9.6□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 NDUFS6O75380 124 aaKnown RBP9.6□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 P01737 135 aa9.6□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 H2AFB2P0C5Z0 115 aa9.6□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 RAB2AP61019 212 aa9.6□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 ZNF56Q15929 161 aa9.6□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 DNLZQ5SXM8 178 aa9.6□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 SMIM3Q9BZL3 60 aa9.6□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 RBM38Q9H0Z9 239 aaKnown RBP9.6□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 ARL2-SNX15V9GYD0 113 aa9.6□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 TRBV25-1A0A075B6N4 114 aa9.59□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 KRBOX1C9JBD0 128 aa9.59□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 GZMBP10144 247 aa9.59□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 RAB4BP61018 213 aa9.59□□□□□ -0.87
NEDD8-MDP1-204ENST00000605847 TRAV34A0A0B4J273 112 aa9.58□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 FAM231BA6NCW3 169 aa9.58□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 H0YIZ8 118 aa9.58□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 H7C1H1 209 aa9.58□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 PLA2G10O15496 165 aa9.58□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 SIX6O95475 246 aa9.58□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 IFNA7P01567 189 aa9.58□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 CDC34P49427 236 aaPredicted RBP9.58□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 RAB5CP51148 216 aa9.58□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 DERL1Q9BUN8 251 aa9.58□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 HSPB11Q9Y547 144 aa9.58□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 MUC21A0A0G2JKD1 596 aa9.57□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 RPS10P46783 165 aaKnown RBP9.57□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 NTM-AS1Q6ZSK4 140 aa9.57□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 PRSS3P2Q8NHM4 247 aa9.57□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 TMSB15BA0A087X1C1 80 aa9.56□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 STAG3L2P0CL84 134 aa9.56□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 STAG3L3P0CL85 134 aa9.56□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 GCHFRP30047 84 aa9.56□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 CYCSP99999 105 aaKnown RBP9.56□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 Q6ZRP5 223 aa9.56□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 VAX2Q9UIW0 290 aa9.56□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 TRBV6-1A0A0K0K1D8 114 aa9.55□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 F5H697 171 aa9.55□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 SH2D1AO60880 128 aa9.55□□□□□ -0.88
NEDD8-MDP1-204ENST00000605847 SRSF9Q13242 221 aaKnown RBP eCLIP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms