RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 DEFB135Q30KP9 77 aa9.15□□□□□ -0.94
HERPUD2-207ENST00000603731 OR10J3Q5JRS4 329 aa9.15□□□□□ -0.94
HERPUD2-207ENST00000603731 PIK3CD-AS1Q5SR53 167 aa9.15□□□□□ -0.94
HERPUD2-207ENST00000603731 PRELID3AQ96N28 172 aa9.15□□□□□ -0.94
HERPUD2-207ENST00000603731 MRPL16Q9NX20 251 aaKnown RBP9.15□□□□□ -0.94
HERPUD2-207ENST00000603731 A0A087WWL8 130 aa9.14□□□□□ -0.95
HERPUD2-207ENST00000603731 A8MWV9 139 aa9.14□□□□□ -0.95
HERPUD2-207ENST00000603731 F5H697 171 aa9.14□□□□□ -0.95
HERPUD2-207ENST00000603731 SNRPEP62304 92 aaKnown RBP9.14□□□□□ -0.95
HERPUD2-207ENST00000603731 Q0VG73 95 aa9.14□□□□□ -0.95
HERPUD2-207ENST00000603731 FAM74A4Q5TZK3 123 aa9.14□□□□□ -0.95
HERPUD2-207ENST00000603731 MRAP2Q96G30 205 aa9.14□□□□□ -0.95
HERPUD2-207ENST00000603731 JPT2Q9H910 190 aa9.14□□□□□ -0.95
HERPUD2-207ENST00000603731 TRGV1A0A0A0MS02 117 aa9.13□□□□□ -0.95
HERPUD2-207ENST00000603731 SMKR1H3BMG3 65 aa9.13□□□□□ -0.95
HERPUD2-207ENST00000603731 Q6ZWC4 215 aa9.13□□□□□ -0.95
HERPUD2-207ENST00000603731 OR11H2Q8NH07 326 aa9.13□□□□□ -0.95
HERPUD2-207ENST00000603731 IL17DQ8TAD2 202 aa9.13□□□□□ -0.95
HERPUD2-207ENST00000603731 C18orf32Q8TCD1 76 aa9.13□□□□□ -0.95
HERPUD2-207ENST00000603731 NDUFAF3Q9BU61 184 aa9.13□□□□□ -0.95
HERPUD2-207ENST00000603731 NOP10Q9NPE3 64 aaKnown RBP9.13□□□□□ -0.95
HERPUD2-207ENST00000603731 U3KQK5 164 aa9.13□□□□□ -0.95
HERPUD2-207ENST00000603731 C5orf52A6NGY3 159 aa9.12□□□□□ -0.95
HERPUD2-207ENST00000603731 NCR2O95944 276 aa9.12□□□□□ -0.95
HERPUD2-207ENST00000603731 DAZ2Q13117 558 aaKnown RBP9.12□□□□□ -0.95
HERPUD2-207ENST00000603731 ZNF56Q15929 161 aa9.12□□□□□ -0.95
HERPUD2-207ENST00000603731 IQCJQ1A5X6 159 aa9.12□□□□□ -0.95
HERPUD2-207ENST00000603731 LGALS9BQ3B8N2 356 aa9.12□□□□□ -0.95
HERPUD2-207ENST00000603731 RASL10AQ92737 203 aa9.12□□□□□ -0.95
HERPUD2-207ENST00000603731 RNF183Q96D59 192 aa9.12□□□□□ -0.95
HERPUD2-207ENST00000603731 LAMTOR2Q9Y2Q5 125 aa9.12□□□□□ -0.95
HERPUD2-207ENST00000603731 KIF25-AS1Q9Y6Z4 181 aa9.12□□□□□ -0.95
HERPUD2-207ENST00000603731 X6R8D5 127 aa9.12□□□□□ -0.95
HERPUD2-207ENST00000603731 RHODO00212 210 aa9.11□□□□□ -0.95
HERPUD2-207ENST00000603731 CRYGDP07320 174 aa9.11□□□□□ -0.95
HERPUD2-207ENST00000603731 HOXA5P20719 270 aa9.11□□□□□ -0.95
HERPUD2-207ENST00000603731 S100A2P29034 98 aa9.11□□□□□ -0.95
HERPUD2-207ENST00000603731 EMP1P54849 157 aa9.11□□□□□ -0.95
HERPUD2-207ENST00000603731 COA6Q5JTJ3 125 aaKnown RBP9.11□□□□□ -0.95
HERPUD2-207ENST00000603731 OVOL2Q9BRP0 275 aa9.11□□□□□ -0.95
HERPUD2-207ENST00000603731 SAMD10Q9BYL1 202 aa9.11□□□□□ -0.95
HERPUD2-207ENST00000603731 MAP1LC3AQ9H492 121 aa9.11□□□□□ -0.95
HERPUD2-207ENST00000603731 COL7A1Q02388 2944 aa9.1□□□□□ -0.95
HERPUD2-207ENST00000603731 TRAV26-2A0A0B4J265 109 aa9.1□□□□□ -0.95
HERPUD2-207ENST00000603731 RS1O15537 224 aa9.1□□□□□ -0.95
HERPUD2-207ENST00000603731 TNFRSF6BO95407 300 aa9.1□□□□□ -0.95
HERPUD2-207ENST00000603731 PPP1R17O96001 155 aa9.1□□□□□ -0.95
HERPUD2-207ENST00000603731 NPYP01303 97 aa9.1□□□□□ -0.95
HERPUD2-207ENST00000603731 MIFP14174 115 aa9.1□□□□□ -0.95
HERPUD2-207ENST00000603731 KPRPQ5T749 579 aaPredicted RBP9.1□□□□□ -0.95
HERPUD2-207ENST00000603731 POM121L12Q8N7R1 296 aa9.1□□□□□ -0.95
HERPUD2-207ENST00000603731 OR4C5Q8NGB2 326 aa9.1□□□□□ -0.95
HERPUD2-207ENST00000603731 PRSS3P2Q8NHM4 247 aa9.1□□□□□ -0.95
HERPUD2-207ENST00000603731 NACAE9PAV3 2078 aa9.09□□□□□ -0.95
HERPUD2-207ENST00000603731 LOC389332A0A1B0GUA5 103 aa9.09□□□□□ -0.95
HERPUD2-207ENST00000603731 GAGE12BA1L429 117 aa9.09□□□□□ -0.95
HERPUD2-207ENST00000603731 PLAC8L1A1L4L8 177 aa9.09□□□□□ -0.95
HERPUD2-207ENST00000603731 SERF1AO75920 110 aa9.09□□□□□ -0.95
HERPUD2-207ENST00000603731 GAGE7O76087 117 aa9.09□□□□□ -0.95
HERPUD2-207ENST00000603731 PRB2P02812 416 aaPredicted RBP9.09□□□□□ -0.95
HERPUD2-207ENST00000603731 GAGE12FP0CL80 117 aa9.09□□□□□ -0.95
HERPUD2-207ENST00000603731 GAGE12GP0CL81 117 aa9.09□□□□□ -0.95
HERPUD2-207ENST00000603731 GAGE12IP0CL82 117 aa9.09□□□□□ -0.95
HERPUD2-207ENST00000603731 GATA1P15976 413 aaPredicted RBP9.09□□□□□ -0.95
HERPUD2-207ENST00000603731 LINC00315P59091 139 aa9.09□□□□□ -0.95
HERPUD2-207ENST00000603731 DEFB121Q5J5C9 76 aa9.09□□□□□ -0.95
HERPUD2-207ENST00000603731 CFAP126Q5VTH2 177 aa9.09□□□□□ -0.95
HERPUD2-207ENST00000603731 SUMO4Q6EEV6 95 aa9.09□□□□□ -0.95
HERPUD2-207ENST00000603731 RNASEKQ6P5S7 137 aaKnown RBP9.09□□□□□ -0.95
HERPUD2-207ENST00000603731 Q6ZTI0 123 aa9.09□□□□□ -0.95
HERPUD2-207ENST00000603731 TP53TG1Q9Y2A0 90 aa9.09□□□□□ -0.95
HERPUD2-207ENST00000603731 RYR2Q92736 4967 aa9.08□□□□□ -0.96
HERPUD2-207ENST00000603731 TRGV2A0A075B6R0 118 aa9.08□□□□□ -0.96
HERPUD2-207ENST00000603731 IGHV3-73A0A0B4J1V6 119 aa9.08□□□□□ -0.96
HERPUD2-207ENST00000603731 TRAV4A0A0B4J268 109 aa9.08□□□□□ -0.96
HERPUD2-207ENST00000603731 H7C1H1 209 aa9.08□□□□□ -0.96
HERPUD2-207ENST00000603731 PDZD11Q5EBL8 140 aa9.08□□□□□ -0.96
HERPUD2-207ENST00000603731 FA2HQ7L5A8 372 aa9.08□□□□□ -0.96
HERPUD2-207ENST00000603731 NIT1Q86X76 327 aa9.08□□□□□ -0.96
HERPUD2-207ENST00000603731 IGHV4-28A0A0C4DH34 117 aa9.07□□□□□ -0.96
HERPUD2-207ENST00000603731 CIDEAO60543 219 aa9.07□□□□□ -0.96
HERPUD2-207ENST00000603731 HSBP1O75506 76 aa9.07□□□□□ -0.96
HERPUD2-207ENST00000603731 GAS8-AS1O95177 125 aa9.07□□□□□ -0.96
HERPUD2-207ENST00000603731 LINC00614P0C842 121 aa9.07□□□□□ -0.96
HERPUD2-207ENST00000603731 ZFP2Q6ZN57 461 aa9.07□□□□□ -0.96
HERPUD2-207ENST00000603731 HIST3H2BBQ8N257 126 aa9.07□□□□□ -0.96
HERPUD2-207ENST00000603731 NRACQ8N912 160 aa9.07□□□□□ -0.96
HERPUD2-207ENST00000603731 CHCHD1Q96BP2 118 aaKnown RBP9.07□□□□□ -0.96
HERPUD2-207ENST00000603731 LOC105371267A0A1B0GV96 52 aa9.06□□□□□ -0.96
HERPUD2-207ENST00000603731 LYRM9A8MSI8 78 aa9.06□□□□□ -0.96
HERPUD2-207ENST00000603731 K7EIL1 84 aa9.06□□□□□ -0.96
HERPUD2-207ENST00000603731 IGHV3-53P01767 116 aa9.06□□□□□ -0.96
HERPUD2-207ENST00000603731 PMCHP20382 165 aa9.06□□□□□ -0.96
HERPUD2-207ENST00000603731 TMEM18Q96B42 140 aa9.06□□□□□ -0.96
HERPUD2-207ENST00000603731 RPL39LQ96EH5 51 aaKnown RBP9.06□□□□□ -0.96
HERPUD2-207ENST00000603731 C20orf78Q9BR46 151 aa9.06□□□□□ -0.96
HERPUD2-207ENST00000603731 ST20Q9HBF5 79 aa9.06□□□□□ -0.96
HERPUD2-207ENST00000603731 NXT2Q9NPJ8 142 aaKnown RBP9.06□□□□□ -0.96
HERPUD2-207ENST00000603731 DEFB4AO15263 64 aa9.05□□□□□ -0.96
HERPUD2-207ENST00000603731 NUPR1O60356 82 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms