RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 Q8N1Y9 231 aa11.84□□□□□ -0.51
PPFIA3-206ENST00000602655 DTX2Q86UW9 622 aa11.83□□□□□ -0.52
PPFIA3-206ENST00000602655 SIGLEC9Q9Y336 463 aa11.83□□□□□ -0.52
PPFIA3-206ENST00000602655 C5orf47Q569G3 176 aa11.83□□□□□ -0.52
PPFIA3-206ENST00000602655 THAP8Q8NA92 274 aa11.83□□□□□ -0.52
PPFIA3-206ENST00000602655 IGHV4-38-2P0DP08 117 aa11.82□□□□□ -0.52
PPFIA3-206ENST00000602655 HERVK_113P61574 105 aa11.82□□□□□ -0.52
PPFIA3-206ENST00000602655 UBR5O95071 2799 aaPredicted RBP11.82□□□□□ -0.52
PPFIA3-206ENST00000602655 IGKV3-7A0A075B6H7 116 aa11.82□□□□□ -0.52
PPFIA3-206ENST00000602655 IGHV3-66A0A0C4DH42 116 aa11.82□□□□□ -0.52
PPFIA3-206ENST00000602655 F8VRH5 84 aa11.82□□□□□ -0.52
PPFIA3-206ENST00000602655 PIMREGQ9BSJ6 248 aa11.82□□□□□ -0.52
PPFIA3-206ENST00000602655 C21orf62Q9NYP8 219 aa11.82□□□□□ -0.52
PPFIA3-206ENST00000602655 CSDC2Q9Y534 153 aaKnown RBP11.81□□□□□ -0.52
PPFIA3-206ENST00000602655 TRBV19A0A075B6N1 114 aa11.81□□□□□ -0.52
PPFIA3-206ENST00000602655 G3V318 75 aa11.81□□□□□ -0.52
PPFIA3-206ENST00000602655 LMO4P61968 165 aa11.81□□□□□ -0.52
PPFIA3-206ENST00000602655 NDUFA11Q86Y39 141 aa11.81□□□□□ -0.52
PPFIA3-206ENST00000602655 PAX8Q06710 450 aa11.81□□□□□ -0.52
PPFIA3-206ENST00000602655 IGLV2-23P01705 113 aa11.8□□□□□ -0.52
PPFIA3-206ENST00000602655 CGB1A6NKQ9 187 aa11.8□□□□□ -0.52
PPFIA3-206ENST00000602655 Q8N8P6 123 aa11.8□□□□□ -0.52
PPFIA3-206ENST00000602655 TMEM126AQ9H061 195 aa11.8□□□□□ -0.52
PPFIA3-206ENST00000602655 PRO1854Q9UHT4 67 aa11.79□□□□□ -0.52
PPFIA3-206ENST00000602655 OOSP1A8MZH6 123 aa11.79□□□□□ -0.52
PPFIA3-206ENST00000602655 OVOL3O00110 214 aa11.79□□□□□ -0.52
PPFIA3-206ENST00000602655 CD7P09564 240 aa11.79□□□□□ -0.52
PPFIA3-206ENST00000602655 HOXB4P17483 251 aaPredicted RBP11.79□□□□□ -0.52
PPFIA3-206ENST00000602655 NBR2O15453 112 aa11.78□□□□□ -0.52
PPFIA3-206ENST00000602655 UBE2D3P61077 147 aa11.78□□□□□ -0.52
PPFIA3-206ENST00000602655 UBE2D2P62837 147 aa11.78□□□□□ -0.52
PPFIA3-206ENST00000602655 TMEM170BQ5T4T1 132 aa11.78□□□□□ -0.52
PPFIA3-206ENST00000602655 SPANXN1Q5VSR9 72 aa11.78□□□□□ -0.52
PPFIA3-206ENST00000602655 NDPQ00604 133 aa11.77□□□□□ -0.52
PPFIA3-206ENST00000602655 TMEM167AQ8TBQ9 72 aa11.77□□□□□ -0.52
PPFIA3-206ENST00000602655 SPXQ9BT56 116 aa11.77□□□□□ -0.52
PPFIA3-206ENST00000602655 KLK5Q9Y337 293 aaPredicted RBP11.77□□□□□ -0.52
PPFIA3-206ENST00000602655 FAM236AA0A1B0GUQ0 79 aa11.77□□□□□ -0.53
PPFIA3-206ENST00000602655 FAM236BA0A1B0GV22 79 aa11.77□□□□□ -0.53
PPFIA3-206ENST00000602655 IGHV3-11P01762 117 aa11.77□□□□□ -0.53
PPFIA3-206ENST00000602655 SIGLEC15Q6ZMC9 328 aa11.77□□□□□ -0.53
PPFIA3-206ENST00000602655 RNF185Q96GF1 192 aa11.77□□□□□ -0.53
PPFIA3-206ENST00000602655 DUX3Q96PT4 197 aa11.77□□□□□ -0.53
PPFIA3-206ENST00000602655 PMVKQ15126 192 aa11.77□□□□□ -0.53
PPFIA3-206ENST00000602655 C2orf82Q6UX34 121 aa11.77□□□□□ -0.53
PPFIA3-206ENST00000602655 GATD1Q8NB37 220 aa11.77□□□□□ -0.53
PPFIA3-206ENST00000602655 C2CD3Q4AC94 2353 aa11.76□□□□□ -0.53
PPFIA3-206ENST00000602655 RASL10AQ92737 203 aa11.76□□□□□ -0.53
PPFIA3-206ENST00000602655 PRR25Q96S07 402 aa11.76□□□□□ -0.53
PPFIA3-206ENST00000602655 EDA2RQ9HAV5 297 aa11.76□□□□□ -0.53
PPFIA3-206ENST00000602655 AVPP01185 164 aa11.76□□□□□ -0.53
PPFIA3-206ENST00000602655 CFC1BP0CG36 223 aa11.76□□□□□ -0.53
PPFIA3-206ENST00000602655 CFC1P0CG37 223 aa11.76□□□□□ -0.53
PPFIA3-206ENST00000602655 ZNF80P51504 273 aaPredicted RBP11.76□□□□□ -0.53
PPFIA3-206ENST00000602655 LINC01559Q495D7 138 aa11.76□□□□□ -0.53
PPFIA3-206ENST00000602655 LINC00574Q9H8X3 128 aa11.76□□□□□ -0.53
PPFIA3-206ENST00000602655 H3BMM0 161 aa11.75□□□□□ -0.53
PPFIA3-206ENST00000602655 TRGV3P03979 118 aa11.75□□□□□ -0.53
PPFIA3-206ENST00000602655 UBE2D1P51668 147 aa11.75□□□□□ -0.53
PPFIA3-206ENST00000602655 UBE2WQ96B02 151 aa11.75□□□□□ -0.53
PPFIA3-206ENST00000602655 ZNF256Q9Y2P7 627 aaPredicted RBP11.75□□□□□ -0.53
PPFIA3-206ENST00000602655 H3BUX3 64 aa11.75□□□□□ -0.53
PPFIA3-206ENST00000602655 PRSS2P07478 247 aa11.75□□□□□ -0.53
PPFIA3-206ENST00000602655 SPANXA1Q9NS26 97 aa11.75□□□□□ -0.53
PPFIA3-206ENST00000602655 SMIM9A6NGZ8 99 aa11.74□□□□□ -0.53
PPFIA3-206ENST00000602655 TRGV11A0A075B6L2 103 aa11.74□□□□□ -0.53
PPFIA3-206ENST00000602655 NPFFO15130 113 aa11.74□□□□□ -0.53
PPFIA3-206ENST00000602655 SPRY2O43597 315 aa11.74□□□□□ -0.53
PPFIA3-206ENST00000602655 ZNF469Q96JG9 3925 aaPredicted RBP11.74□□□□□ -0.53
PPFIA3-206ENST00000602655 IGHV3-64A0A075B6Q5 118 aa11.73□□□□□ -0.53
PPFIA3-206ENST00000602655 HLA-DMBP28068 263 aa11.73□□□□□ -0.53
PPFIA3-206ENST00000602655 LINC00311Q8N616 119 aa11.73□□□□□ -0.53
PPFIA3-206ENST00000602655 C11orf44Q8N8P7 122 aa11.73□□□□□ -0.53
PPFIA3-206ENST00000602655 ODF3Q96PU9 254 aa11.73□□□□□ -0.53
PPFIA3-206ENST00000602655 MRPS12O15235 138 aaKnown RBP11.73□□□□□ -0.53
PPFIA3-206ENST00000602655 BLCAPP62952 87 aa11.73□□□□□ -0.53
PPFIA3-206ENST00000602655 FAM19A5Q7Z5A7 132 aaPredicted RBP11.73□□□□□ -0.53
PPFIA3-206ENST00000602655 LY6G5BQ8NDX9 201 aa11.72□□□□□ -0.53
PPFIA3-206ENST00000602655 RNF125Q96EQ8 232 aa11.72□□□□□ -0.53
PPFIA3-206ENST00000602655 NIPBLQ6KC79 2804 aaeCLIP11.72□□□□□ -0.53
PPFIA3-206ENST00000602655 A4D1N5 150 aa11.72□□□□□ -0.53
PPFIA3-206ENST00000602655 ERCC8Q13216 396 aa11.72□□□□□ -0.53
PPFIA3-206ENST00000602655 LINC01620Q4KN68 170 aa11.72□□□□□ -0.53
PPFIA3-206ENST00000602655 Q6ZS46 218 aa11.72□□□□□ -0.53
PPFIA3-206ENST00000602655 C10orf105Q8TEF2 133 aa11.72□□□□□ -0.53
PPFIA3-206ENST00000602655 MGPP08493 103 aa11.72□□□□□ -0.53
PPFIA3-206ENST00000602655 HERVK_113P63121 156 aa11.72□□□□□ -0.53
PPFIA3-206ENST00000602655 ATXN8Q156A1 80 aa11.72□□□□□ -0.53
PPFIA3-206ENST00000602655 RPL13AP40429 203 aaKnown RBP11.71□□□□□ -0.53
PPFIA3-206ENST00000602655 Q96MF0 132 aa11.71□□□□□ -0.53
PPFIA3-206ENST00000602655 SHANK2-AS3Q9BTD1 123 aa11.71□□□□□ -0.53
PPFIA3-206ENST00000602655 TMEM14CQ9P0S9 112 aa11.71□□□□□ -0.53
PPFIA3-206ENST00000602655 DNAJC30Q96LL9 226 aa11.71□□□□□ -0.54
PPFIA3-206ENST00000602655 SIRPDQ9H106 197 aa11.71□□□□□ -0.54
PPFIA3-206ENST00000602655 ATRQ13535 2644 aa11.71□□□□□ -0.54
PPFIA3-206ENST00000602655 ATP6V0E1O15342 81 aa11.7□□□□□ -0.54
PPFIA3-206ENST00000602655 KHDC1LQ5JSQ8 128 aa11.7□□□□□ -0.54
PPFIA3-206ENST00000602655 TMEM101Q96IK0 257 aa11.7□□□□□ -0.54
PPFIA3-206ENST00000602655 M0R1W7 72 aa11.7□□□□□ -0.54
PPFIA3-206ENST00000602655 M0R381 172 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms