RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 SH2D1AO60880 128 aa8.67□□□□□ -1.02
RPS28-204ENST00000602140 PTTG1O95997 202 aa8.67□□□□□ -1.02
RPS28-204ENST00000602140 PLA2G1BP04054 148 aaKnown RBP8.67□□□□□ -1.02
RPS28-204ENST00000602140 GIPP09681 153 aaPredicted RBP8.67□□□□□ -1.02
RPS28-204ENST00000602140 LINC01620Q4KN68 170 aa8.67□□□□□ -1.02
RPS28-204ENST00000602140 DNLZQ5SXM8 178 aa8.67□□□□□ -1.02
RPS28-204ENST00000602140 NIT1Q86X76 327 aa8.67□□□□□ -1.02
RPS28-204ENST00000602140 LINC00528Q8N1L1 170 aa8.67□□□□□ -1.02
RPS28-204ENST00000602140 OR11H4Q8NGC9 324 aa8.67□□□□□ -1.02
RPS28-204ENST00000602140 HIST1H2BAQ96A08 127 aa8.67□□□□□ -1.02
RPS28-204ENST00000602140 DNAJC30Q96LL9 226 aa8.67□□□□□ -1.02
RPS28-204ENST00000602140 NKX6-2Q9C056 277 aaPredicted RBP8.67□□□□□ -1.02
RPS28-204ENST00000602140 COX11Q9Y6N1 276 aa8.67□□□□□ -1.02
RPS28-204ENST00000602140 A0A087WWL8 130 aa8.66□□□□□ -1.02
RPS28-204ENST00000602140 FXYD6-FXYD2A0A087WZ82 144 aa8.66□□□□□ -1.02
RPS28-204ENST00000602140 RMI2Q96E14 147 aa8.66□□□□□ -1.02
RPS28-204ENST00000602140 KLK12Q9UKR0 248 aa8.66□□□□□ -1.02
RPS28-204ENST00000602140 ZFP30Q9Y2G7 519 aa8.66□□□□□ -1.02
RPS28-204ENST00000602140 PHLDA3Q9Y5J5 127 aa8.66□□□□□ -1.02
RPS28-204ENST00000602140 IGKV2D-24A0A075B6R9 120 aa8.65□□□□□ -1.02
RPS28-204ENST00000602140 TMSB15BA0A087X1C1 80 aa8.65□□□□□ -1.02
RPS28-204ENST00000602140 RBFOX3A6NFN3 312 aa8.65□□□□□ -1.02
RPS28-204ENST00000602140 M0R381 172 aa8.65□□□□□ -1.02
RPS28-204ENST00000602140 TPT1P13693 172 aaKnown RBP8.65□□□□□ -1.02
RPS28-204ENST00000602140 UBE2G1P62253 170 aa8.65□□□□□ -1.02
RPS28-204ENST00000602140 AKR1C8PQ5T2L2 129 aa8.65□□□□□ -1.02
RPS28-204ENST00000602140 FAM162BQ5T6X4 162 aa8.65□□□□□ -1.02
RPS28-204ENST00000602140 COX8CQ7Z4L0 72 aa8.65□□□□□ -1.02
RPS28-204ENST00000602140 SFRP2Q96HF1 295 aa8.65□□□□□ -1.02
RPS28-204ENST00000602140 SEC11BP0C7V7 166 aa8.64□□□□□ -1.03
RPS28-204ENST00000602140 ZNF674Q2M3X9 581 aa8.64□□□□□ -1.03
RPS28-204ENST00000602140 Q8N976 141 aa8.64□□□□□ -1.03
RPS28-204ENST00000602140 UBE2WQ96B02 151 aa8.64□□□□□ -1.03
RPS28-204ENST00000602140 FMC1Q96HJ9 113 aa8.64□□□□□ -1.03
RPS28-204ENST00000602140 A0A087WX48 190 aa8.63□□□□□ -1.03
RPS28-204ENST00000602140 MAP1LC3B2A6NCE7 125 aa8.63□□□□□ -1.03
RPS28-204ENST00000602140 SCXQ7RTU7 201 aa8.63□□□□□ -1.03
RPS28-204ENST00000602140 MAP1LC3BQ9GZQ8 125 aa8.63□□□□□ -1.03
RPS28-204ENST00000602140 TRBV10-1A0A0K0K1A3 114 aa8.62□□□□□ -1.03
RPS28-204ENST00000602140 LTAP01374 205 aa8.62□□□□□ -1.03
RPS28-204ENST00000602140 RPL36AP83881 106 aaKnown RBP8.62□□□□□ -1.03
RPS28-204ENST00000602140 ELOBQ15370 118 aa8.62□□□□□ -1.03
RPS28-204ENST00000602140 LINC01559Q495D7 138 aa8.62□□□□□ -1.03
RPS28-204ENST00000602140 CST9LP1Q5W188 147 aa8.62□□□□□ -1.03
RPS28-204ENST00000602140 KCNIP4Q6PIL6 250 aa8.62□□□□□ -1.03
RPS28-204ENST00000602140 ZFP82Q8N141 532 aa8.62□□□□□ -1.03
RPS28-204ENST00000602140 DEFB104AQ8WTQ1 72 aa8.62□□□□□ -1.03
RPS28-204ENST00000602140 RPL36ALQ969Q0 106 aaKnown RBP8.62□□□□□ -1.03
RPS28-204ENST00000602140 CHCHD7Q9BUK0 85 aa8.62□□□□□ -1.03
RPS28-204ENST00000602140 TRBV7-3A0A075B6L6 115 aa8.61□□□□□ -1.03
RPS28-204ENST00000602140 TRBV6-1A0A0K0K1D8 114 aa8.61□□□□□ -1.03
RPS28-204ENST00000602140 KRTAP29-1A8MX34 341 aaPredicted RBP8.61□□□□□ -1.03
RPS28-204ENST00000602140 AKR1C3P42330 323 aa8.61□□□□□ -1.03
RPS28-204ENST00000602140 UBE2D3P61077 147 aa8.61□□□□□ -1.03
RPS28-204ENST00000602140 UBE2D2P62837 147 aa8.61□□□□□ -1.03
RPS28-204ENST00000602140 TMEM262E9PQX1 116 aa8.6□□□□□ -1.03
RPS28-204ENST00000602140 FHITP49789 147 aa8.6□□□□□ -1.03
RPS28-204ENST00000602140 ATRAIDQ6UW56 229 aa8.6□□□□□ -1.03
RPS28-204ENST00000602140 STOML3Q8TAV4 291 aa8.6□□□□□ -1.03
RPS28-204ENST00000602140 TCEAL7Q9BRU2 100 aa8.6□□□□□ -1.03
RPS28-204ENST00000602140 CHAC1Q9BUX1 264 aa8.6□□□□□ -1.03
RPS28-204ENST00000602140 CYTL1Q9NRR1 136 aa8.6□□□□□ -1.03
RPS28-204ENST00000602140 G3V3Q6 166 aa8.59□□□□□ -1.03
RPS28-204ENST00000602140 ARPC5O15511 151 aa8.59□□□□□ -1.03
RPS28-204ENST00000602140 Q0VG73 95 aa8.59□□□□□ -1.03
RPS28-204ENST00000602140 CIRBP-AS1Q8TBR5 109 aa8.59□□□□□ -1.03
RPS28-204ENST00000602140 TRBV6-8A0A0A6YYG3 113 aa8.58□□□□□ -1.04
RPS28-204ENST00000602140 PAGE4O60829 102 aa8.58□□□□□ -1.04
RPS28-204ENST00000602140 RAB4BP61018 213 aa8.58□□□□□ -1.04
RPS28-204ENST00000602140 RPL19P84098 196 aaKnown RBP8.58□□□□□ -1.04
RPS28-204ENST00000602140 ZNF56Q15929 161 aa8.58□□□□□ -1.04
RPS28-204ENST00000602140 ENHOQ6UWT2 76 aa8.58□□□□□ -1.04
RPS28-204ENST00000602140 OR10G8Q8NGN5 311 aa8.58□□□□□ -1.04
RPS28-204ENST00000602140 OR10AG1Q8NH19 301 aa8.58□□□□□ -1.04
RPS28-204ENST00000602140 C1orf43Q9BWL3 253 aa8.58□□□□□ -1.04
RPS28-204ENST00000602140 C15orf54Q8N8G6 183 aa8.57□□□□□ -1.04
RPS28-204ENST00000602140 NEXN-AS1Q8NBZ9 246 aa8.57□□□□□ -1.04
RPS28-204ENST00000602140 MUC21A0A0G2JKD1 596 aa8.56□□□□□ -1.04
RPS28-204ENST00000602140 MUC21A0A140T8X8 626 aa8.56□□□□□ -1.04
RPS28-204ENST00000602140 CRPP02741 224 aa8.56□□□□□ -1.04
RPS28-204ENST00000602140 ANGP03950 147 aaKnown RBP8.56□□□□□ -1.04
RPS28-204ENST00000602140 KRTAP10-4P60372 401 aaPredicted RBP8.56□□□□□ -1.04
RPS28-204ENST00000602140 C14orf177Q52M58 125 aa8.56□□□□□ -1.04
RPS28-204ENST00000602140 MPV17L2Q567V2 206 aa8.56□□□□□ -1.04
RPS28-204ENST00000602140 PRR27Q6MZM9 219 aa8.56□□□□□ -1.04
RPS28-204ENST00000602140 ZNF471Q9BX82 626 aaPredicted RBP8.56□□□□□ -1.04
RPS28-204ENST00000602140 LRP1Q07954 4544 aaKnown RBP8.55□□□□□ -1.04
RPS28-204ENST00000602140 A0A1B0GV50 99 aa8.55□□□□□ -1.04
RPS28-204ENST00000602140 SCO2A0A1W2PP80 73 aa8.55□□□□□ -1.04
RPS28-204ENST00000602140 S100A9P06702 114 aaKnown RBP8.55□□□□□ -1.04
RPS28-204ENST00000602140 CXCL1P09341 107 aa8.55□□□□□ -1.04
RPS28-204ENST00000602140 BAGE2Q86Y30 109 aa8.55□□□□□ -1.04
RPS28-204ENST00000602140 SFT2D1Q8WV19 159 aa8.55□□□□□ -1.04
RPS28-204ENST00000602140 CHCHD5Q9BSY4 110 aa8.55□□□□□ -1.04
RPS28-204ENST00000602140 MLST8Q9BVC4 326 aa8.55□□□□□ -1.04
RPS28-204ENST00000602140 F5H697 171 aa8.54□□□□□ -1.04
RPS28-204ENST00000602140 SMLR1H3BR10 107 aa8.54□□□□□ -1.04
RPS28-204ENST00000602140 SNAI2O43623 268 aa8.54□□□□□ -1.04
RPS28-204ENST00000602140 HLA-DQA1P01909 254 aa8.54□□□□□ -1.04
RPS28-204ENST00000602140 SSTP61278 116 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms