RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 TRGV2A0A075B6R0 118 aa10.27□□□□□ -0.77
USE1-210ENST00000601662 GAGE12BA1L429 117 aa10.27□□□□□ -0.77
USE1-210ENST00000601662 GAGE7O76087 117 aa10.27□□□□□ -0.77
USE1-210ENST00000601662 GAGE12FP0CL80 117 aa10.27□□□□□ -0.77
USE1-210ENST00000601662 GAGE12GP0CL81 117 aa10.27□□□□□ -0.77
USE1-210ENST00000601662 GAGE12IP0CL82 117 aa10.27□□□□□ -0.77
USE1-210ENST00000601662 SMIM17P0DL12 118 aa10.27□□□□□ -0.77
USE1-210ENST00000601662 DAD1P61803 113 aa10.27□□□□□ -0.77
USE1-210ENST00000601662 MRPL54Q6P161 138 aaKnown RBP10.27□□□□□ -0.77
USE1-210ENST00000601662 CBLN2Q8IUK8 224 aa10.27□□□□□ -0.77
USE1-210ENST00000601662 AP1S3Q96PC3 154 aa10.27□□□□□ -0.77
USE1-210ENST00000601662 KLK5Q9Y337 293 aaPredicted RBP10.27□□□□□ -0.77
USE1-210ENST00000601662 RYR3Q15413 4870 aa10.27□□□□□ -0.77
USE1-210ENST00000601662 LCE6AA0A183 80 aa10.26□□□□□ -0.77
USE1-210ENST00000601662 A0A1B0GXF2 115 aa10.26□□□□□ -0.77
USE1-210ENST00000601662 DEFB130BP0DP73 79 aa10.26□□□□□ -0.77
USE1-210ENST00000601662 DEFB130AP0DP74 79 aa10.26□□□□□ -0.77
USE1-210ENST00000601662 CAMPP49913 170 aa10.26□□□□□ -0.77
USE1-210ENST00000601662 OR4C5Q8NGB2 326 aa10.26□□□□□ -0.77
USE1-210ENST00000601662 MSRB1Q9NZV6 116 aa10.26□□□□□ -0.77
USE1-210ENST00000601662 CELA1Q9UNI1 258 aa10.26□□□□□ -0.77
USE1-210ENST00000601662 MUC4Q99102 2169 aa10.26□□□□□ -0.77
USE1-210ENST00000601662 PLECQ15149 4684 aaKnown RBP10.25□□□□□ -0.77
USE1-210ENST00000601662 SACSQ9NZJ4 4579 aa10.25□□□□□ -0.77
USE1-210ENST00000601662 TRAV4A0A0B4J268 109 aa10.25□□□□□ -0.77
USE1-210ENST00000601662 RHODO00212 210 aa10.25□□□□□ -0.77
USE1-210ENST00000601662 RS1O15537 224 aa10.25□□□□□ -0.77
USE1-210ENST00000601662 SCO1O75880 301 aa10.25□□□□□ -0.77
USE1-210ENST00000601662 FAM210BQ96KR6 192 aa10.25□□□□□ -0.77
USE1-210ENST00000601662 YPEL4Q96NS1 127 aa10.25□□□□□ -0.77
USE1-210ENST00000601662 TMEM191AQ9H0A3 160 aa10.25□□□□□ -0.77
USE1-210ENST00000601662 TGIF2-C20orf24A0A0A6YYL0 155 aa10.24□□□□□ -0.77
USE1-210ENST00000601662 EVI2AP22794 236 aa10.24□□□□□ -0.77
USE1-210ENST00000601662 CFAP126Q5VTH2 177 aa10.24□□□□□ -0.77
USE1-210ENST00000601662 ZFP2Q6ZN57 461 aa10.24□□□□□ -0.77
USE1-210ENST00000601662 Q6ZTC4 211 aa10.24□□□□□ -0.77
USE1-210ENST00000601662 C14orf178Q8N769 122 aaPredicted RBP10.24□□□□□ -0.77
USE1-210ENST00000601662 GATD1Q8NB37 220 aa10.24□□□□□ -0.77
USE1-210ENST00000601662 GNB1LQ9BYB4 327 aa10.24□□□□□ -0.77
USE1-210ENST00000601662 DPH3P1Q9H4G8 78 aa10.24□□□□□ -0.77
USE1-210ENST00000601662 CRYGDP07320 174 aa10.23□□□□□ -0.77
USE1-210ENST00000601662 RAB4BP61018 213 aa10.23□□□□□ -0.77
USE1-210ENST00000601662 C12orf74Q32Q52 190 aa10.23□□□□□ -0.77
USE1-210ENST00000601662 FRZBQ92765 325 aa10.23□□□□□ -0.77
USE1-210ENST00000601662 JPT2Q9H910 190 aa10.23□□□□□ -0.77
USE1-210ENST00000601662 HLA-DQA1P01909 254 aa10.22□□□□□ -0.77
USE1-210ENST00000601662 MT-ND6P03923 174 aa10.22□□□□□ -0.77
USE1-210ENST00000601662 SLAQ13239 276 aa10.22□□□□□ -0.77
USE1-210ENST00000601662 KIF25-AS1Q9Y6Z4 181 aa10.22□□□□□ -0.77
USE1-210ENST00000601662 RYR2Q92736 4967 aa10.22□□□□□ -0.77
USE1-210ENST00000601662 A0A087WWL8 130 aa10.21□□□□□ -0.77
USE1-210ENST00000601662 COLCA2A8K830 154 aa10.21□□□□□ -0.77
USE1-210ENST00000601662 IGLL5B9A064 214 aa10.21□□□□□ -0.77
USE1-210ENST00000601662 ATP5G1P05496 136 aa10.21□□□□□ -0.77
USE1-210ENST00000601662 FAM74A4Q5TZK3 123 aa10.21□□□□□ -0.77
USE1-210ENST00000601662 FAM104BQ5XKR9 115 aa10.21□□□□□ -0.77
USE1-210ENST00000601662 POM121L12Q8N7R1 296 aa10.21□□□□□ -0.77
USE1-210ENST00000601662 SAMD10Q9BYL1 202 aa10.21□□□□□ -0.77
USE1-210ENST00000601662 TRAV10A0A0B4J240 114 aa10.2□□□□□ -0.78
USE1-210ENST00000601662 TRGV4A0A0C4DH28 118 aa10.2□□□□□ -0.78
USE1-210ENST00000601662 F5H697 171 aa10.2□□□□□ -0.78
USE1-210ENST00000601662 LY6G6CO95867 125 aa10.2□□□□□ -0.78
USE1-210ENST00000601662 UFSP1Q6NVU6 142 aa10.2□□□□□ -0.78
USE1-210ENST00000601662 TMEM136Q6ZRR5 245 aa10.2□□□□□ -0.78
USE1-210ENST00000601662 ZNF479Q96JC4 524 aa10.2□□□□□ -0.78
USE1-210ENST00000601662 DEFB131BA0A096LNP1 70 aa10.19□□□□□ -0.78
USE1-210ENST00000601662 IGHV3-53P01767 116 aa10.19□□□□□ -0.78
USE1-210ENST00000601662 MGPP08493 103 aa10.19□□□□□ -0.78
USE1-210ENST00000601662 RAB4AP20338 218 aa10.19□□□□□ -0.78
USE1-210ENST00000601662 LINC00315P59091 139 aa10.19□□□□□ -0.78
USE1-210ENST00000601662 LYSTQ99698 3801 aa10.19□□□□□ -0.78
USE1-210ENST00000601662 ALMS1Q8TCU4 4167 aa10.19□□□□□ -0.78
USE1-210ENST00000601662 H7C1H1 209 aa10.18□□□□□ -0.78
USE1-210ENST00000601662 APCSP02743 223 aa10.18□□□□□ -0.78
USE1-210ENST00000601662 PPBPP02775 128 aa10.18□□□□□ -0.78
USE1-210ENST00000601662 HTN3P15516 51 aa10.18□□□□□ -0.78
USE1-210ENST00000601662 RAB5AP20339 215 aa10.18□□□□□ -0.78
USE1-210ENST00000601662 FHL2Q14192 279 aa10.18□□□□□ -0.78
USE1-210ENST00000601662 ZNF56Q15929 161 aa10.18□□□□□ -0.78
USE1-210ENST00000601662 AMN1Q8IY45 258 aa10.18□□□□□ -0.78
USE1-210ENST00000601662 MRAP2Q96G30 205 aa10.18□□□□□ -0.78
USE1-210ENST00000601662 TRAPPC1Q9Y5R8 145 aa10.18□□□□□ -0.78
USE1-210ENST00000601662 DNAH1Q9P2D7 4330 aa10.18□□□□□ -0.78
USE1-210ENST00000601662 IGHV3-73A0A0B4J1V6 119 aa10.17□□□□□ -0.78
USE1-210ENST00000601662 PPP1R17O96001 155 aa10.17□□□□□ -0.78
USE1-210ENST00000601662 RPS10P46783 165 aaKnown RBP10.17□□□□□ -0.78
USE1-210ENST00000601662 LINC00476Q8WZB0 136 aa10.17□□□□□ -0.78
USE1-210ENST00000601662 RNF185Q96GF1 192 aa10.17□□□□□ -0.78
USE1-210ENST00000601662 HHLA3Q9XRX5 114 aa10.17□□□□□ -0.78
USE1-210ENST00000601662 TRBV6-4A0A1B0GX49 114 aa10.16□□□□□ -0.78
USE1-210ENST00000601662 F5H768 121 aa10.16□□□□□ -0.78
USE1-210ENST00000601662 GATA1P15976 413 aaPredicted RBP10.16□□□□□ -0.78
USE1-210ENST00000601662 FABP9Q0Z7S8 132 aa10.16□□□□□ -0.78
USE1-210ENST00000601662 MRPL51Q4U2R6 128 aaKnown RBP10.16□□□□□ -0.78
USE1-210ENST00000601662 MRPL18Q9H0U6 180 aaKnown RBP10.16□□□□□ -0.78
USE1-210ENST00000601662 PRO0255Q9UI72 69 aa10.16□□□□□ -0.78
USE1-210ENST00000601662 TRBV10-1A0A0K0K1A3 114 aa10.15□□□□□ -0.78
USE1-210ENST00000601662 CKS2P33552 79 aa10.15□□□□□ -0.78
USE1-210ENST00000601662 PRADC1Q9BSG0 188 aa10.15□□□□□ -0.78
USE1-210ENST00000601662 HYDINQ4G0P3 5121 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms