RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 A0A0U1RQV1 116 aa9.65□□□□□ -0.86
SHANK2-218ENST00000601538 PRR20EP86478 221 aa9.65□□□□□ -0.86
SHANK2-218ENST00000601538 PRR20CP86479 221 aa9.65□□□□□ -0.86
SHANK2-218ENST00000601538 PRR20DP86480 221 aa9.65□□□□□ -0.86
SHANK2-218ENST00000601538 PRR20BP86481 221 aa9.65□□□□□ -0.86
SHANK2-218ENST00000601538 PRR20AP86496 221 aa9.65□□□□□ -0.86
SHANK2-218ENST00000601538 Q8N1Y9 231 aa9.65□□□□□ -0.86
SHANK2-218ENST00000601538 MT-ATP8P03928 68 aa9.65□□□□□ -0.86
SHANK2-218ENST00000601538 IGLV3-1P01715 115 aa9.65□□□□□ -0.86
SHANK2-218ENST00000601538 CRIPAKQ8N1N5 446 aa9.65□□□□□ -0.86
SHANK2-218ENST00000601538 FOXE3Q13461 319 aa9.65□□□□□ -0.86
SHANK2-218ENST00000601538 COX7A2LO14548 114 aa9.65□□□□□ -0.87
SHANK2-218ENST00000601538 IGHV1-58A0A0C4DH39 117 aa9.65□□□□□ -0.87
SHANK2-218ENST00000601538 ODF1Q14990 250 aa9.65□□□□□ -0.87
SHANK2-218ENST00000601538 HIST2H2BCQ6DN03 193 aa9.65□□□□□ -0.87
SHANK2-218ENST00000601538 ZNF503Q96F45 646 aa9.65□□□□□ -0.87
SHANK2-218ENST00000601538 C11orf86A6NJI1 115 aa9.64□□□□□ -0.87
SHANK2-218ENST00000601538 Q8TCH9 128 aa9.64□□□□□ -0.87
SHANK2-218ENST00000601538 TFF1P04155 84 aa9.64□□□□□ -0.87
SHANK2-218ENST00000601538 MPLKIPQ8TAP9 179 aa9.64□□□□□ -0.87
SHANK2-218ENST00000601538 USP17L23D6RBM5 183 aa9.64□□□□□ -0.87
SHANK2-218ENST00000601538 A0A1B0GXF2 115 aa9.64□□□□□ -0.87
SHANK2-218ENST00000601538 RPS28P62857 69 aaKnown RBP9.64□□□□□ -0.87
SHANK2-218ENST00000601538 A0A0J9YXY3 114 aa9.63□□□□□ -0.87
SHANK2-218ENST00000601538 PRB4P10163 310 aaPredicted RBP9.63□□□□□ -0.87
SHANK2-218ENST00000601538 TEX36Q5VZQ5 186 aa9.63□□□□□ -0.87
SHANK2-218ENST00000601538 ATP6V0E1O15342 81 aa9.63□□□□□ -0.87
SHANK2-218ENST00000601538 TOMM6Q96B49 74 aa9.63□□□□□ -0.87
SHANK2-218ENST00000601538 IGHV7-4-1A0A0J9YVY3 117 aa9.63□□□□□ -0.87
SHANK2-218ENST00000601538 DAND5Q8N907 189 aa9.63□□□□□ -0.87
SHANK2-218ENST00000601538 DKK4Q9UBT3 224 aa9.63□□□□□ -0.87
SHANK2-218ENST00000601538 C9orf47Q6ZRZ4 202 aa9.63□□□□□ -0.87
SHANK2-218ENST00000601538 WIPF3A6NGB9 483 aa9.63□□□□□ -0.87
SHANK2-218ENST00000601538 VPREB1P12018 145 aa9.63□□□□□ -0.87
SHANK2-218ENST00000601538 FANCD2OSQ96PS1 177 aa9.63□□□□□ -0.87
SHANK2-218ENST00000601538 TIMM17AQ99595 171 aa9.63□□□□□ -0.87
SHANK2-218ENST00000601538 IGHV4-28A0A0C4DH34 117 aa9.62□□□□□ -0.87
SHANK2-218ENST00000601538 CD59P13987 128 aa9.62□□□□□ -0.87
SHANK2-218ENST00000601538 IGKV1-39P01597 117 aa9.62□□□□□ -0.87
SHANK2-218ENST00000601538 IGKV1D-39P04432 117 aa9.62□□□□□ -0.87
SHANK2-218ENST00000601538 COX7CP15954 63 aa9.62□□□□□ -0.87
SHANK2-218ENST00000601538 MLST8Q9BVC4 326 aa9.62□□□□□ -0.87
SHANK2-218ENST00000601538 SMIM9A6NGZ8 99 aa9.62□□□□□ -0.87
SHANK2-218ENST00000601538 TIRAPP58753 221 aa9.62□□□□□ -0.87
SHANK2-218ENST00000601538 C4orf48Q5BLP8 95 aa9.62□□□□□ -0.87
SHANK2-218ENST00000601538 FAM120AOSQ5T036 256 aa9.62□□□□□ -0.87
SHANK2-218ENST00000601538 C16orf54Q6UWD8 224 aa9.62□□□□□ -0.87
SHANK2-218ENST00000601538 DIRC1Q969H9 104 aa9.62□□□□□ -0.87
SHANK2-218ENST00000601538 IGHV3-38A0A0C4DH36 116 aa9.62□□□□□ -0.87
SHANK2-218ENST00000601538 RPL18AQ02543 176 aaKnown RBP9.61□□□□□ -0.87
SHANK2-218ENST00000601538 IGHV1-69P01742 117 aa9.61□□□□□ -0.87
SHANK2-218ENST00000601538 IGKV4-1P06312 121 aa9.61□□□□□ -0.87
SHANK2-218ENST00000601538 CASC2Q6XLA1 102 aa9.61□□□□□ -0.87
SHANK2-218ENST00000601538 C11orf1Q9H5F2 150 aa9.61□□□□□ -0.87
SHANK2-218ENST00000601538 CFHR3Q02985 330 aa9.61□□□□□ -0.87
SHANK2-218ENST00000601538 BPY2O14599 106 aa9.61□□□□□ -0.87
SHANK2-218ENST00000601538 TRAV23DV6A0A075B6W5 121 aa9.6□□□□□ -0.87
SHANK2-218ENST00000601538 LYNX1G3V0Z9 82 aa9.6□□□□□ -0.87
SHANK2-218ENST00000601538 PRB1P04280 392 aa9.6□□□□□ -0.87
SHANK2-218ENST00000601538 LYNX1P0DP58 116 aa9.6□□□□□ -0.87
SHANK2-218ENST00000601538 NRGNQ92686 78 aa9.6□□□□□ -0.87
SHANK2-218ENST00000601538 SETD2Q9BYW2 2564 aaPredicted RBP9.6□□□□□ -0.87
SHANK2-218ENST00000601538 A6NED7 52 aa9.6□□□□□ -0.87
SHANK2-218ENST00000601538 CFAP126Q5VTH2 177 aa9.6□□□□□ -0.87
SHANK2-218ENST00000601538 FLVCR1-AS1Q8TAF5 88 aa9.6□□□□□ -0.87
SHANK2-218ENST00000601538 DEFB121Q5J5C9 76 aa9.6□□□□□ -0.87
SHANK2-218ENST00000601538 GPR179Q6PRD1 2367 aa9.6□□□□□ -0.87
SHANK2-218ENST00000601538 IGKV1-6A0A0C4DH72 117 aa9.59□□□□□ -0.87
SHANK2-218ENST00000601538 CAMK2N2Q96S95 79 aa9.59□□□□□ -0.87
SHANK2-218ENST00000601538 FGF23Q9GZV9 251 aaPredicted RBP9.59□□□□□ -0.87
SHANK2-218ENST00000601538 PRO0628Q9UI54 55 aa9.59□□□□□ -0.87
SHANK2-218ENST00000601538 K7EQD1 137 aa9.59□□□□□ -0.87
SHANK2-218ENST00000601538 LECT2O14960 151 aa9.59□□□□□ -0.87
SHANK2-218ENST00000601538 PRB2P02812 416 aaPredicted RBP9.59□□□□□ -0.87
SHANK2-218ENST00000601538 MBD3L4A6NDZ8 208 aaPredicted RBP9.59□□□□□ -0.87
SHANK2-218ENST00000601538 MBD3L3A6NE82 208 aaPredicted RBP9.59□□□□□ -0.87
SHANK2-218ENST00000601538 MBD3L5A6NJ08 208 aaPredicted RBP9.59□□□□□ -0.87
SHANK2-218ENST00000601538 MBD3L2Q8NHZ7 208 aaPredicted RBP9.59□□□□□ -0.87
SHANK2-218ENST00000601538 C16orf74Q96GX8 76 aa9.59□□□□□ -0.87
SHANK2-218ENST00000601538 NUPR1O60356 82 aa9.59□□□□□ -0.87
SHANK2-218ENST00000601538 LINC00526Q96FQ7 95 aa9.59□□□□□ -0.87
SHANK2-218ENST00000601538 J3QLI3 93 aa9.59□□□□□ -0.87
SHANK2-218ENST00000601538 NDUFA1O15239 70 aa9.59□□□□□ -0.87
SHANK2-218ENST00000601538 RNASE13Q5GAN3 156 aaKnown RBP9.59□□□□□ -0.87
SHANK2-218ENST00000601538 TRBV7-3A0A075B6L6 115 aa9.58□□□□□ -0.88
SHANK2-218ENST00000601538 MLANAQ16655 118 aa9.58□□□□□ -0.88
SHANK2-218ENST00000601538 Q6ZSR3 168 aa9.58□□□□□ -0.88
SHANK2-218ENST00000601538 IGKV2D-24A0A075B6R9 120 aa9.58□□□□□ -0.88
SHANK2-218ENST00000601538 CSDC2Q9Y534 153 aaKnown RBP9.58□□□□□ -0.88
SHANK2-218ENST00000601538 ABCA2Q9BZC7 2435 aa9.58□□□□□ -0.88
SHANK2-218ENST00000601538 WI2-2373I1.2A0A1W2PRP0 233 aa9.58□□□□□ -0.88
SHANK2-218ENST00000601538 MED14OSP0DP75 135 aa9.58□□□□□ -0.88
SHANK2-218ENST00000601538 SERP1Q9Y6X1 66 aa9.58□□□□□ -0.88
SHANK2-218ENST00000601538 WT1-ASQ06250 92 aa9.58□□□□□ -0.88
SHANK2-218ENST00000601538 ELANEP08246 267 aa9.58□□□□□ -0.88
SHANK2-218ENST00000601538 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.57□□□□□ -0.88
SHANK2-218ENST00000601538 IGKV2-29A2NJV5 120 aaPredicted RBP9.57□□□□□ -0.88
SHANK2-218ENST00000601538 THSD7BQ9C0I4 1608 aa9.57□□□□□ -0.88
SHANK2-218ENST00000601538 H0Y9J4 135 aa9.57□□□□□ -0.88
SHANK2-218ENST00000601538 MIAQ16674 131 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 189 ms