RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 TMEM88Q6PEY1 159 aa14.47□□□□□ -0.09
PNKP-215ENST00000600910 C14orf178Q8N769 122 aaPredicted RBP14.47□□□□□ -0.09
PNKP-215ENST00000600910 ATP5G1P05496 136 aa14.46□□□□□ -0.09
PNKP-215ENST00000600910 CRYGDP07320 174 aa14.46□□□□□ -0.09
PNKP-215ENST00000600910 ATP5L2Q7Z4Y8 100 aa14.46□□□□□ -0.09
PNKP-215ENST00000600910 CBLN2Q8IUK8 224 aa14.46□□□□□ -0.09
PNKP-215ENST00000600910 NACAE9PAV3 2078 aa14.45□□□□□ -0.1
PNKP-215ENST00000600910 TRAV9-1A0A075B6T8 112 aa14.45□□□□□ -0.1
PNKP-215ENST00000600910 IGHV3-73A0A0B4J1V6 119 aa14.45□□□□□ -0.1
PNKP-215ENST00000600910 A0A1B0GXF2 115 aa14.45□□□□□ -0.1
PNKP-215ENST00000600910 CAMPP49913 170 aa14.45□□□□□ -0.1
PNKP-215ENST00000600910 HTN3P15516 51 aa14.44□□□□□ -0.1
PNKP-215ENST00000600910 HBBP68871 147 aa14.44□□□□□ -0.1
PNKP-215ENST00000600910 SMCO4Q9NRQ5 59 aa14.44□□□□□ -0.1
PNKP-215ENST00000600910 A0A1B0GW15 77 aa14.44□□□□□ -0.1
PNKP-215ENST00000600910 SMIM17P0DL12 118 aa14.44□□□□□ -0.1
PNKP-215ENST00000600910 ELOBQ15370 118 aa14.44□□□□□ -0.1
PNKP-215ENST00000600910 UFSP1Q6NVU6 142 aa14.44□□□□□ -0.1
PNKP-215ENST00000600910 SMIM15Q7Z3B0 74 aa14.44□□□□□ -0.1
PNKP-215ENST00000600910 KIF25-AS1Q9Y6Z4 181 aa14.44□□□□□ -0.1
PNKP-215ENST00000600910 SCO1O75880 301 aa14.43□□□□□ -0.1
PNKP-215ENST00000600910 HOXA5P20719 270 aa14.43□□□□□ -0.1
PNKP-215ENST00000600910 ZFP2Q6ZN57 461 aa14.43□□□□□ -0.1
PNKP-215ENST00000600910 DPH3P1Q9H4G8 78 aa14.43□□□□□ -0.1
PNKP-215ENST00000600910 RHODO00212 210 aa14.42□□□□□ -0.1
PNKP-215ENST00000600910 FHL2Q14192 279 aa14.42□□□□□ -0.1
PNKP-215ENST00000600910 TGIF2-C20orf24A0A0A6YYL0 155 aa14.41□□□□□ -0.1
PNKP-215ENST00000600910 TRGV4A0A0C4DH28 118 aa14.41□□□□□ -0.1
PNKP-215ENST00000600910 F5H768 121 aa14.41□□□□□ -0.1
PNKP-215ENST00000600910 CIDEAO60543 219 aa14.41□□□□□ -0.1
PNKP-215ENST00000600910 S100A8P05109 93 aa14.41□□□□□ -0.1
PNKP-215ENST00000600910 TMEM191AQ9H0A3 160 aa14.41□□□□□ -0.1
PNKP-215ENST00000600910 DEFB131BA0A096LNP1 70 aa14.41□□□□□ -0.1
PNKP-215ENST00000600910 MGPP08493 103 aa14.41□□□□□ -0.1
PNKP-215ENST00000600910 LINC00315P59091 139 aa14.41□□□□□ -0.1
PNKP-215ENST00000600910 YPEL4Q96NS1 127 aa14.41□□□□□ -0.1
PNKP-215ENST00000600910 TRAV10A0A0B4J240 114 aa14.4□□□□□ -0.1
PNKP-215ENST00000600910 ZNF56Q15929 161 aa14.4□□□□□ -0.1
PNKP-215ENST00000600910 RASL11AQ6T310 242 aa14.39□□□□□ -0.11
PNKP-215ENST00000600910 Q6ZSN1 163 aa14.39□□□□□ -0.11
PNKP-215ENST00000600910 PHLDA1Q8WV24 401 aaPredicted RBP14.39□□□□□ -0.11
PNKP-215ENST00000600910 TRBV24-1A0A075B6N3 115 aa14.38□□□□□ -0.11
PNKP-215ENST00000600910 F5H697 171 aa14.38□□□□□ -0.11
PNKP-215ENST00000600910 RAB4BP61018 213 aa14.38□□□□□ -0.11
PNKP-215ENST00000600910 AMN1Q8IY45 258 aa14.38□□□□□ -0.11
PNKP-215ENST00000600910 GATD1Q8NB37 220 aa14.38□□□□□ -0.11
PNKP-215ENST00000600910 HHLA3Q9XRX5 114 aa14.38□□□□□ -0.11
PNKP-215ENST00000600910 DNAH7Q8WXX0 4024 aa14.38□□□□□ -0.11
PNKP-215ENST00000600910 GATA1P15976 413 aaPredicted RBP14.37□□□□□ -0.11
PNKP-215ENST00000600910 WWC2-AS2Q96NR7 200 aa14.37□□□□□ -0.11
PNKP-215ENST00000600910 PRO0255Q9UI72 69 aa14.37□□□□□ -0.11
PNKP-215ENST00000600910 RAB4AP20338 218 aa14.36□□□□□ -0.11
PNKP-215ENST00000600910 FAM104BQ5XKR9 115 aa14.36□□□□□ -0.11
PNKP-215ENST00000600910 SLC25A29Q8N8R3 303 aa14.36□□□□□ -0.11
PNKP-215ENST00000600910 RNF185Q96GF1 192 aa14.36□□□□□ -0.11
PNKP-215ENST00000600910 TRAV26-1A0A087WT03 109 aa14.35□□□□□ -0.11
PNKP-215ENST00000600910 CRYBA4P53673 196 aa14.35□□□□□ -0.11
PNKP-215ENST00000600910 SLAQ13239 276 aa14.35□□□□□ -0.11
PNKP-215ENST00000600910 SUMO4Q6EEV6 95 aa14.35□□□□□ -0.11
PNKP-215ENST00000600910 TMEM136Q6ZRR5 245 aa14.35□□□□□ -0.11
PNKP-215ENST00000600910 FAM210BQ96KR6 192 aa14.35□□□□□ -0.11
PNKP-215ENST00000600910 A0A0J9YY99 117 aa14.34□□□□□ -0.11
PNKP-215ENST00000600910 TRBV6-4A0A1B0GX49 114 aa14.34□□□□□ -0.11
PNKP-215ENST00000600910 TRAV26-2A0A0B4J265 109 aa14.33□□□□□ -0.11
PNKP-215ENST00000600910 K7EQD1 137 aa14.33□□□□□ -0.11
PNKP-215ENST00000600910 VSIG2Q96IQ7 327 aa14.33□□□□□ -0.11
PNKP-215ENST00000600910 PAX4O43316 350 aa14.33□□□□□ -0.12
PNKP-215ENST00000600910 GNB1LQ9BYB4 327 aa14.33□□□□□ -0.12
PNKP-215ENST00000600910 P0DMU3 169 aa14.32□□□□□ -0.12
PNKP-215ENST00000600910 FAM231AP0DMU4 169 aa14.32□□□□□ -0.12
PNKP-215ENST00000600910 FAM231CP0DMU5 169 aa14.32□□□□□ -0.12
PNKP-215ENST00000600910 RHOHQ15669 191 aa14.32□□□□□ -0.12
PNKP-215ENST00000600910 COX19Q49B96 90 aa14.32□□□□□ -0.12
PNKP-215ENST00000600910 MRPL51Q4U2R6 128 aaKnown RBP14.32□□□□□ -0.12
PNKP-215ENST00000600910 MUC7Q8TAX7 377 aa14.32□□□□□ -0.12
PNKP-215ENST00000600910 M0QY20 66 aa14.31□□□□□ -0.12
PNKP-215ENST00000600910 CEMP1Q6PRD7 247 aaPredicted RBP14.31□□□□□ -0.12
PNKP-215ENST00000600910 PRADC1Q9BSG0 188 aa14.31□□□□□ -0.12
PNKP-215ENST00000600910 Q9UF83 564 aa14.31□□□□□ -0.12
PNKP-215ENST00000600910 CSMD3Q7Z407 3707 aa14.31□□□□□ -0.12
PNKP-215ENST00000600910 LOC100131303A0A0U1RQF7 123 aa14.3□□□□□ -0.12
PNKP-215ENST00000600910 COLCA2A8K830 154 aa14.3□□□□□ -0.12
PNKP-215ENST00000600910 HLA-DQA1P01909 254 aa14.3□□□□□ -0.12
PNKP-215ENST00000600910 NUPR2A6NF83 97 aa14.3□□□□□ -0.12
PNKP-215ENST00000600910 H7C1H1 209 aa14.3□□□□□ -0.12
PNKP-215ENST00000600910 MRAP2Q96G30 205 aa14.3□□□□□ -0.12
PNKP-215ENST00000600910 IGLL5B9A064 214 aa14.29□□□□□ -0.12
PNKP-215ENST00000600910 SMKR1H3BMG3 65 aa14.29□□□□□ -0.12
PNKP-215ENST00000600910 GAS8-AS1O95177 125 aa14.29□□□□□ -0.12
PNKP-215ENST00000600910 NCR2O95944 276 aa14.29□□□□□ -0.12
PNKP-215ENST00000600910 MT-ND6P03923 174 aa14.29□□□□□ -0.12
PNKP-215ENST00000600910 GYPEP15421 78 aa14.29□□□□□ -0.12
PNKP-215ENST00000600910 ZFAND6Q6FIF0 208 aa14.29□□□□□ -0.12
PNKP-215ENST00000600910 FRZBQ92765 325 aa14.29□□□□□ -0.12
PNKP-215ENST00000600910 APCSP02743 223 aa14.28□□□□□ -0.12
PNKP-215ENST00000600910 TRBV10-1A0A0K0K1A3 114 aa14.27□□□□□ -0.12
PNKP-215ENST00000600910 H3BNG1 76 aa14.27□□□□□ -0.12
PNKP-215ENST00000600910 CKS2P33552 79 aa14.27□□□□□ -0.12
PNKP-215ENST00000600910 NEXN-AS1Q8NBZ9 246 aa14.27□□□□□ -0.12
PNKP-215ENST00000600910 RPL39LQ96EH5 51 aaKnown RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 230.6 ms