RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 TMEM263Q8WUH6 116 aaKnown RBP12.19□□□□□ -0.46
SYDE1-204ENST00000600440 E7EQL1 145 aa12.18□□□□□ -0.46
SYDE1-204ENST00000600440 RNF5Q99942 180 aa12.18□□□□□ -0.46
SYDE1-204ENST00000600440 BDP1A6H8Y1 2624 aa12.17□□□□□ -0.46
SYDE1-204ENST00000600440 RNF223E7ERA6 249 aa12.17□□□□□ -0.46
SYDE1-204ENST00000600440 G3V318 75 aa12.17□□□□□ -0.46
SYDE1-204ENST00000600440 MUC4Q99102 2169 aa12.17□□□□□ -0.46
SYDE1-204ENST00000600440 LY6LH3BQJ8 138 aa12.17□□□□□ -0.46
SYDE1-204ENST00000600440 MRPL23Q16540 153 aaKnown RBP12.17□□□□□ -0.46
SYDE1-204ENST00000600440 METTL26Q96S19 204 aa12.17□□□□□ -0.46
SYDE1-204ENST00000600440 RBAKDNA6NC62 111 aa12.17□□□□□ -0.46
SYDE1-204ENST00000600440 CDX4O14627 284 aaPredicted RBP12.17□□□□□ -0.46
SYDE1-204ENST00000600440 PRRC2AP48634 2157 aaKnown RBP12.17□□□□□ -0.46
SYDE1-204ENST00000600440 PAPPA-AS1Q5QFB9 102 aa12.16□□□□□ -0.46
SYDE1-204ENST00000600440 YAE1D1Q9NRH1 226 aa12.16□□□□□ -0.46
SYDE1-204ENST00000600440 VPREB3Q9UKI3 123 aa12.16□□□□□ -0.46
SYDE1-204ENST00000600440 FAM236AA0A1B0GUQ0 79 aa12.16□□□□□ -0.46
SYDE1-204ENST00000600440 FAM236BA0A1B0GV22 79 aa12.16□□□□□ -0.46
SYDE1-204ENST00000600440 M0QXV9 152 aa12.16□□□□□ -0.46
SYDE1-204ENST00000600440 ZNF22P17026 224 aaPredicted RBP12.16□□□□□ -0.46
SYDE1-204ENST00000600440 C20orf173Q96LM9 149 aa12.16□□□□□ -0.46
SYDE1-204ENST00000600440 TNFRSF18Q9Y5U5 241 aa12.16□□□□□ -0.46
SYDE1-204ENST00000600440 A0A0G2JNJ9 132 aa12.15□□□□□ -0.46
SYDE1-204ENST00000600440 LGALS9O00182 355 aa12.15□□□□□ -0.46
SYDE1-204ENST00000600440 ZFAND3Q9H8U3 227 aa12.15□□□□□ -0.46
SYDE1-204ENST00000600440 Q9UFV3 132 aa12.15□□□□□ -0.46
SYDE1-204ENST00000600440 TRAV8-3A0A0A6YYJ7 113 aa12.15□□□□□ -0.46
SYDE1-204ENST00000600440 TRBV10-2A0A0K0K1G8 114 aa12.15□□□□□ -0.46
SYDE1-204ENST00000600440 SPXQ9BT56 116 aa12.15□□□□□ -0.46
SYDE1-204ENST00000600440 IGHV4-4A0A075B6R2 117 aa12.14□□□□□ -0.47
SYDE1-204ENST00000600440 TRAV12-3A0A0B4J271 114 aa12.14□□□□□ -0.47
SYDE1-204ENST00000600440 TMEM95Q3KNT9 176 aa12.14□□□□□ -0.47
SYDE1-204ENST00000600440 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.14□□□□□ -0.47
SYDE1-204ENST00000600440 SDHAF1A6NFY7 115 aa12.14□□□□□ -0.47
SYDE1-204ENST00000600440 IGIPA6NJ69 53 aa12.14□□□□□ -0.47
SYDE1-204ENST00000600440 UBE2E1P51965 193 aa12.14□□□□□ -0.47
SYDE1-204ENST00000600440 GPHB5Q86YW7 130 aa12.14□□□□□ -0.47
SYDE1-204ENST00000600440 DOPEY2Q9Y3R5 2298 aa12.14□□□□□ -0.47
SYDE1-204ENST00000600440 CLPSL1A2RUU4 121 aa12.14□□□□□ -0.47
SYDE1-204ENST00000600440 AMELXQ99217 191 aa12.14□□□□□ -0.47
SYDE1-204ENST00000600440 IGHV7-81A0A0B4J1V7 117 aa12.13□□□□□ -0.47
SYDE1-204ENST00000600440 TRAV21A0A0B4J279 112 aa12.13□□□□□ -0.47
SYDE1-204ENST00000600440 A0A0J9YXV3 536 aa12.13□□□□□ -0.47
SYDE1-204ENST00000600440 NPBQ8NG41 125 aa12.13□□□□□ -0.47
SYDE1-204ENST00000600440 TRGV11A0A075B6L2 103 aa12.13□□□□□ -0.47
SYDE1-204ENST00000600440 LOC107984640A0A0U1RRK4 108 aa12.13□□□□□ -0.47
SYDE1-204ENST00000600440 RNASE13Q5GAN3 156 aaKnown RBP12.13□□□□□ -0.47
SYDE1-204ENST00000600440 MAP1AP78559 2803 aaPredicted RBP12.13□□□□□ -0.47
SYDE1-204ENST00000600440 NACAE9PAV3 2078 aa12.12□□□□□ -0.47
SYDE1-204ENST00000600440 TLN1Q9Y490 2541 aaKnown RBP12.12□□□□□ -0.47
SYDE1-204ENST00000600440 H7C423 109 aa12.12□□□□□ -0.47
SYDE1-204ENST00000600440 C9orf47Q6ZRZ4 202 aa12.12□□□□□ -0.47
SYDE1-204ENST00000600440 PIP4P1Q86T03 277 aa12.12□□□□□ -0.47
SYDE1-204ENST00000600440 EEF1AKMT3Q96AZ1 226 aa12.12□□□□□ -0.47
SYDE1-204ENST00000600440 CEMP1Q6PRD7 247 aaPredicted RBP12.12□□□□□ -0.47
SYDE1-204ENST00000600440 KLK5Q9Y337 293 aaPredicted RBP12.12□□□□□ -0.47
SYDE1-204ENST00000600440 NOTCH3Q9UM47 2321 aa12.12□□□□□ -0.47
SYDE1-204ENST00000600440 OOSP1A8MZH6 123 aa12.12□□□□□ -0.47
SYDE1-204ENST00000600440 ATP6V0E1O15342 81 aa12.12□□□□□ -0.47
SYDE1-204ENST00000600440 SUMO4Q6EEV6 95 aa12.12□□□□□ -0.47
SYDE1-204ENST00000600440 LINC00694P0DN24 101 aa12.11□□□□□ -0.47
SYDE1-204ENST00000600440 C9orf153Q5TBE3 101 aa12.11□□□□□ -0.47
SYDE1-204ENST00000600440 ZNF883P0CG24 379 aa12.11□□□□□ -0.47
SYDE1-204ENST00000600440 Q6Q795 121 aa12.11□□□□□ -0.47
SYDE1-204ENST00000600440 IGFL2Q6UWQ7 119 aa12.11□□□□□ -0.47
SYDE1-204ENST00000600440 ZFAND2AQ8N6M9 145 aa12.11□□□□□ -0.47
SYDE1-204ENST00000600440 CCDC140Q96MF4 163 aa12.11□□□□□ -0.47
SYDE1-204ENST00000600440 P0DMU3 169 aa12.1□□□□□ -0.47
SYDE1-204ENST00000600440 FAM231AP0DMU4 169 aa12.1□□□□□ -0.47
SYDE1-204ENST00000600440 FAM231CP0DMU5 169 aa12.1□□□□□ -0.47
SYDE1-204ENST00000600440 DAND5Q8N907 189 aa12.1□□□□□ -0.47
SYDE1-204ENST00000600440 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.1□□□□□ -0.47
SYDE1-204ENST00000600440 A8MZ25 164 aa12.1□□□□□ -0.47
SYDE1-204ENST00000600440 ZNF876PQ49A33 203 aa12.1□□□□□ -0.47
SYDE1-204ENST00000600440 ICOSQ9Y6W8 199 aa12.1□□□□□ -0.47
SYDE1-204ENST00000600440 A0A0B4J2C4 111 aa12.09□□□□□ -0.47
SYDE1-204ENST00000600440 A0A0U1RRA0 63 aa12.09□□□□□ -0.47
SYDE1-204ENST00000600440 M0R2P5 195 aa12.09□□□□□ -0.47
SYDE1-204ENST00000600440 VCYO14598 125 aa12.09□□□□□ -0.47
SYDE1-204ENST00000600440 COX6CP09669 75 aa12.09□□□□□ -0.47
SYDE1-204ENST00000600440 RNASE3P12724 160 aaKnown RBP12.09□□□□□ -0.47
SYDE1-204ENST00000600440 ATP5J2P56134 94 aa12.09□□□□□ -0.47
SYDE1-204ENST00000600440 IGKV3-20P01619 116 aa12.09□□□□□ -0.47
SYDE1-204ENST00000600440 DUX5Q96PT3 197 aa12.09□□□□□ -0.47
SYDE1-204ENST00000600440 VMO1Q7Z5L0 202 aa12.08□□□□□ -0.48
SYDE1-204ENST00000600440 MDFICQ9P1T7 246 aa12.08□□□□□ -0.48
SYDE1-204ENST00000600440 C2CD3Q4AC94 2353 aa12.08□□□□□ -0.48
SYDE1-204ENST00000600440 A0A0J9YXY3 114 aa12.08□□□□□ -0.48
SYDE1-204ENST00000600440 RPL13AP40429 203 aaKnown RBP12.08□□□□□ -0.48
SYDE1-204ENST00000600440 AKAP13Q12802 2813 aa12.08□□□□□ -0.48
SYDE1-204ENST00000600440 LEPROTO15243 131 aa12.07□□□□□ -0.48
SYDE1-204ENST00000600440 CD3EP07766 207 aa12.07□□□□□ -0.48
SYDE1-204ENST00000600440 LINC01560Q8TB33 94 aa12.07□□□□□ -0.48
SYDE1-204ENST00000600440 TMEM141Q96I45 108 aa12.07□□□□□ -0.48
SYDE1-204ENST00000600440 IGHV1-69DA0A0B4J2H0 117 aa12.07□□□□□ -0.48
SYDE1-204ENST00000600440 RS1O15537 224 aa12.07□□□□□ -0.48
SYDE1-204ENST00000600440 LINC00477Q96M19 166 aa12.07□□□□□ -0.48
SYDE1-204ENST00000600440 LINC01587Q99440 93 aa12.07□□□□□ -0.48
SYDE1-204ENST00000600440 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.07□□□□□ -0.48
SYDE1-204ENST00000600440 TMEM223A0PJW6 202 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms