RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 MRPL23Q16540 153 aaKnown RBP11.57□□□□□ -0.56
SHKBP1-219ENST00000599575 RNF212Q495C1 297 aa11.57□□□□□ -0.56
SHKBP1-219ENST00000599575 GTSF1Q8WW33 167 aa11.57□□□□□ -0.56
SHKBP1-219ENST00000599575 BORCS7Q96B45 105 aa11.57□□□□□ -0.56
SHKBP1-219ENST00000599575 PRADC1Q9BSG0 188 aa11.57□□□□□ -0.56
SHKBP1-219ENST00000599575 F8W036 122 aa11.56□□□□□ -0.56
SHKBP1-219ENST00000599575 CRYGDP07320 174 aa11.56□□□□□ -0.56
SHKBP1-219ENST00000599575 SMIM17P0DL12 118 aa11.56□□□□□ -0.56
SHKBP1-219ENST00000599575 FAM3BP58499 235 aaPredicted RBP11.56□□□□□ -0.56
SHKBP1-219ENST00000599575 ICOSQ9Y6W8 199 aa11.56□□□□□ -0.56
SHKBP1-219ENST00000599575 PLECQ15149 4684 aaKnown RBP11.56□□□□□ -0.56
SHKBP1-219ENST00000599575 A0A0J9YY99 117 aa11.55□□□□□ -0.56
SHKBP1-219ENST00000599575 LCE6AA0A183 80 aa11.55□□□□□ -0.56
SHKBP1-219ENST00000599575 NUDT3O95989 172 aa11.55□□□□□ -0.56
SHKBP1-219ENST00000599575 MT-ND4LP03901 98 aa11.55□□□□□ -0.56
SHKBP1-219ENST00000599575 NTF3P20783 257 aa11.55□□□□□ -0.56
SHKBP1-219ENST00000599575 LINC00476Q8WZB0 136 aa11.55□□□□□ -0.56
SHKBP1-219ENST00000599575 ANAPC16Q96DE5 110 aa11.55□□□□□ -0.56
SHKBP1-219ENST00000599575 NAT8BQ9UHF3 227 aa11.55□□□□□ -0.56
SHKBP1-219ENST00000599575 HIGD1CA8MV81 97 aa11.54□□□□□ -0.56
SHKBP1-219ENST00000599575 RAB4BP61018 213 aa11.54□□□□□ -0.56
SHKBP1-219ENST00000599575 FAM74A4Q5TZK3 123 aa11.54□□□□□ -0.56
SHKBP1-219ENST00000599575 SMIM15Q7Z3B0 74 aa11.54□□□□□ -0.56
SHKBP1-219ENST00000599575 SLC25A29Q8N8R3 303 aa11.54□□□□□ -0.56
SHKBP1-219ENST00000599575 SAMD10Q9BYL1 202 aa11.54□□□□□ -0.56
SHKBP1-219ENST00000599575 JPT2Q9H910 190 aa11.54□□□□□ -0.56
SHKBP1-219ENST00000599575 A0A096LPF7 62 aa11.53□□□□□ -0.56
SHKBP1-219ENST00000599575 TRBV10-1A0A0K0K1A3 114 aa11.53□□□□□ -0.56
SHKBP1-219ENST00000599575 A0A1B0GUT8 65 aa11.53□□□□□ -0.56
SHKBP1-219ENST00000599575 SMIM27A0A1W2PRY6 76 aa11.53□□□□□ -0.56
SHKBP1-219ENST00000599575 CCL18P55774 89 aa11.53□□□□□ -0.56
SHKBP1-219ENST00000599575 TWIST1Q15672 202 aa11.53□□□□□ -0.56
SHKBP1-219ENST00000599575 A0A087WWL8 130 aa11.52□□□□□ -0.57
SHKBP1-219ENST00000599575 MUC21A0A0G2JKD1 596 aa11.52□□□□□ -0.57
SHKBP1-219ENST00000599575 MUC21A0A140T8X8 626 aa11.52□□□□□ -0.57
SHKBP1-219ENST00000599575 K7EQD1 137 aa11.52□□□□□ -0.57
SHKBP1-219ENST00000599575 GYPEP15421 78 aa11.52□□□□□ -0.57
SHKBP1-219ENST00000599575 SRIP30626 198 aa11.52□□□□□ -0.57
SHKBP1-219ENST00000599575 C10orf91Q5T1B1 145 aa11.52□□□□□ -0.57
SHKBP1-219ENST00000599575 NEGR1Q7Z3B1 354 aa11.52□□□□□ -0.57
SHKBP1-219ENST00000599575 C14orf178Q8N769 122 aaPredicted RBP11.52□□□□□ -0.57
SHKBP1-219ENST00000599575 KIF25-AS1Q9Y6Z4 181 aa11.52□□□□□ -0.57
SHKBP1-219ENST00000599575 IGHV3-73A0A0B4J1V6 119 aa11.51□□□□□ -0.57
SHKBP1-219ENST00000599575 A0A1B0GW15 77 aa11.51□□□□□ -0.57
SHKBP1-219ENST00000599575 ADCYAP1P18509 176 aa11.51□□□□□ -0.57
SHKBP1-219ENST00000599575 FRZBQ92765 325 aa11.51□□□□□ -0.57
SHKBP1-219ENST00000599575 PGLYRP4Q96LB8 373 aa11.51□□□□□ -0.57
SHKBP1-219ENST00000599575 DPH3P1Q9H4G8 78 aa11.51□□□□□ -0.57
SHKBP1-219ENST00000599575 CARHSP1Q9Y2V2 147 aaKnown RBP11.51□□□□□ -0.57
SHKBP1-219ENST00000599575 H7C1H1 209 aa11.5□□□□□ -0.57
SHKBP1-219ENST00000599575 TIRAPP58753 221 aa11.5□□□□□ -0.57
SHKBP1-219ENST00000599575 RIGQ13278 110 aa11.5□□□□□ -0.57
SHKBP1-219ENST00000599575 NUP35Q8NFH5 326 aa11.5□□□□□ -0.57
SHKBP1-219ENST00000599575 CTDSP1Q9GZU7 261 aa11.5□□□□□ -0.57
SHKBP1-219ENST00000599575 MSRB1Q9NZV6 116 aa11.5□□□□□ -0.57
SHKBP1-219ENST00000599575 LY6G6CO95867 125 aa11.49□□□□□ -0.57
SHKBP1-219ENST00000599575 LINC00315P59091 139 aa11.49□□□□□ -0.57
SHKBP1-219ENST00000599575 SSTP61278 116 aa11.49□□□□□ -0.57
SHKBP1-219ENST00000599575 ZNF56Q15929 161 aa11.49□□□□□ -0.57
SHKBP1-219ENST00000599575 KMT2CQ8NEZ4 4911 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-219ENST00000599575 F5H697 171 aa11.48□□□□□ -0.57
SHKBP1-219ENST00000599575 S100A8P05109 93 aa11.48□□□□□ -0.57
SHKBP1-219ENST00000599575 EVI2AP22794 236 aa11.48□□□□□ -0.57
SHKBP1-219ENST00000599575 NDUFA5Q16718 116 aa11.48□□□□□ -0.57
SHKBP1-219ENST00000599575 Q6ZSN1 163 aa11.48□□□□□ -0.57
SHKBP1-219ENST00000599575 UBE2DNLQ8IWF7 75 aa11.48□□□□□ -0.57
SHKBP1-219ENST00000599575 IMMP2LQ96T52 175 aa11.48□□□□□ -0.57
SHKBP1-219ENST00000599575 TMEM242Q9NWH2 141 aa11.48□□□□□ -0.57
SHKBP1-219ENST00000599575 RPL36AP83881 106 aaKnown RBP11.47□□□□□ -0.57
SHKBP1-219ENST00000599575 RPL36ALQ969Q0 106 aaKnown RBP11.47□□□□□ -0.57
SHKBP1-219ENST00000599575 UPK3BQ9BT76 320 aa11.47□□□□□ -0.57
SHKBP1-219ENST00000599575 TMEM191AQ9H0A3 160 aa11.47□□□□□ -0.57
SHKBP1-219ENST00000599575 RHEBQ15382 184 aa11.46□□□□□ -0.57
SHKBP1-219ENST00000599575 ATP5L2Q7Z4Y8 100 aa11.46□□□□□ -0.57
SHKBP1-219ENST00000599575 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.46□□□□□ -0.57
SHKBP1-219ENST00000599575 DNAJC30Q96LL9 226 aa11.46□□□□□ -0.57
SHKBP1-219ENST00000599575 MRPS16Q9Y3D3 137 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-219ENST00000599575 LYSTQ99698 3801 aa11.45□□□□□ -0.58
SHKBP1-219ENST00000599575 TRBV7-3A0A075B6L6 115 aa11.45□□□□□ -0.58
SHKBP1-219ENST00000599575 A0A087WWC5 75 aa11.45□□□□□ -0.58
SHKBP1-219ENST00000599575 LINC00694P0DN24 101 aa11.45□□□□□ -0.58
SHKBP1-219ENST00000599575 ESRGQ1W209 222 aa11.45□□□□□ -0.58
SHKBP1-219ENST00000599575 LYPD5Q6UWN5 251 aa11.45□□□□□ -0.58
SHKBP1-219ENST00000599575 NACAE9PAV3 2078 aa11.45□□□□□ -0.58
SHKBP1-219ENST00000599575 M0QY20 66 aa11.44□□□□□ -0.58
SHKBP1-219ENST00000599575 MGPP08493 103 aa11.44□□□□□ -0.58
SHKBP1-219ENST00000599575 ATP6V0E2Q8NHE4 81 aa11.44□□□□□ -0.58
SHKBP1-219ENST00000599575 GTSF1LQ9H1H1 148 aa11.44□□□□□ -0.58
SHKBP1-219ENST00000599575 LINC00588Q9Y4M8 146 aa11.44□□□□□ -0.58
SHKBP1-219ENST00000599575 TRAV9-1A0A075B6T8 112 aa11.43□□□□□ -0.58
SHKBP1-219ENST00000599575 LOC100131303A0A0U1RQF7 123 aa11.43□□□□□ -0.58
SHKBP1-219ENST00000599575 KCNIP4Q6PIL6 250 aa11.43□□□□□ -0.58
SHKBP1-219ENST00000599575 RASL11AQ6T310 242 aa11.43□□□□□ -0.58
SHKBP1-219ENST00000599575 SVBPQ8N300 66 aa11.43□□□□□ -0.58
SHKBP1-219ENST00000599575 GAGE12JA6NER3 117 aa11.42□□□□□ -0.58
SHKBP1-219ENST00000599575 K7EP13 123 aa11.42□□□□□ -0.58
SHKBP1-219ENST00000599575 SNAPINO95295 136 aa11.42□□□□□ -0.58
SHKBP1-219ENST00000599575 HBBP68871 147 aa11.42□□□□□ -0.58
SHKBP1-219ENST00000599575 GAGE1Q13065 139 aa11.42□□□□□ -0.58
SHKBP1-219ENST00000599575 GAGE4Q13068 117 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms