RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 FOXA3P55318 350 aaPredicted RBP15.49■□□□□ 0.07
CHMP2A-204ENST00000597848 TWIST1Q15672 202 aa15.49■□□□□ 0.07
CHMP2A-204ENST00000597848 C14orf178Q8N769 122 aaPredicted RBP15.49■□□□□ 0.07
CHMP2A-204ENST00000597848 CRYGDP07320 174 aa15.48■□□□□ 0.07
CHMP2A-204ENST00000597848 SMIM17P0DL12 118 aa15.48■□□□□ 0.07
CHMP2A-204ENST00000597848 ANAPC16Q96DE5 110 aa15.48■□□□□ 0.07
CHMP2A-204ENST00000597848 VSIG2Q96IQ7 327 aa15.48■□□□□ 0.07
CHMP2A-204ENST00000597848 AP1S3Q96PC3 154 aa15.48■□□□□ 0.07
CHMP2A-204ENST00000597848 NAT8BQ9UHF3 227 aa15.48■□□□□ 0.07
CHMP2A-204ENST00000597848 GATA1P15976 413 aaPredicted RBP15.47■□□□□ 0.07
CHMP2A-204ENST00000597848 C10orf91Q5T1B1 145 aa15.47■□□□□ 0.07
CHMP2A-204ENST00000597848 SLC7A5P1Q8MH63 180 aa15.47■□□□□ 0.07
CHMP2A-204ENST00000597848 C15orf53Q8NAA6 179 aa15.47■□□□□ 0.07
CHMP2A-204ENST00000597848 CARHSP1Q9Y2V2 147 aaKnown RBP15.47■□□□□ 0.07
CHMP2A-204ENST00000597848 SMIM27A0A1W2PRY6 76 aa15.46■□□□□ 0.07
CHMP2A-204ENST00000597848 TRGC1P0CF51 173 aa15.46■□□□□ 0.07
CHMP2A-204ENST00000597848 UFSP1Q6NVU6 142 aa15.46■□□□□ 0.07
CHMP2A-204ENST00000597848 NUP35Q8NFH5 326 aa15.46■□□□□ 0.07
CHMP2A-204ENST00000597848 CNFNQ9BYD5 112 aa15.46■□□□□ 0.07
CHMP2A-204ENST00000597848 A0A1B0GUT8 65 aa15.45■□□□□ 0.06
CHMP2A-204ENST00000597848 H3BNG1 76 aa15.45■□□□□ 0.06
CHMP2A-204ENST00000597848 Q6ZSN1 163 aa15.45■□□□□ 0.06
CHMP2A-204ENST00000597848 SLC25A29Q8N8R3 303 aa15.45■□□□□ 0.06
CHMP2A-204ENST00000597848 F5H697 171 aa15.44■□□□□ 0.06
CHMP2A-204ENST00000597848 NDUFA5Q16718 116 aa15.44■□□□□ 0.06
CHMP2A-204ENST00000597848 PRADC1Q9BSG0 188 aa15.44■□□□□ 0.06
CHMP2A-204ENST00000597848 TRBV6-4A0A1B0GX49 114 aa15.43■□□□□ 0.06
CHMP2A-204ENST00000597848 APOC3P02656 99 aa15.43■□□□□ 0.06
CHMP2A-204ENST00000597848 GYPEP15421 78 aa15.43■□□□□ 0.06
CHMP2A-204ENST00000597848 EVI2AP22794 236 aa15.43■□□□□ 0.06
CHMP2A-204ENST00000597848 ZNF56Q15929 161 aa15.43■□□□□ 0.06
CHMP2A-204ENST00000597848 SMIM15Q7Z3B0 74 aa15.43■□□□□ 0.06
CHMP2A-204ENST00000597848 NACAE9PAV3 2078 aa15.42■□□□□ 0.06
CHMP2A-204ENST00000597848 MGPP08493 103 aa15.42■□□□□ 0.06
CHMP2A-204ENST00000597848 RIGQ13278 110 aa15.42■□□□□ 0.06
CHMP2A-204ENST00000597848 RHOHQ15669 191 aa15.42■□□□□ 0.06
CHMP2A-204ENST00000597848 ICOSQ9Y6W8 199 aa15.42■□□□□ 0.06
CHMP2A-204ENST00000597848 KIF25-AS1Q9Y6Z4 181 aa15.42■□□□□ 0.06
CHMP2A-204ENST00000597848 LOC100131303A0A0U1RQF7 123 aa15.41■□□□□ 0.06
CHMP2A-204ENST00000597848 RAB4BP61018 213 aa15.41■□□□□ 0.06
CHMP2A-204ENST00000597848 CLRN3Q8NCR9 226 aa15.41■□□□□ 0.06
CHMP2A-204ENST00000597848 CTDSP1Q9GZU7 261 aa15.41■□□□□ 0.06
CHMP2A-204ENST00000597848 DPH3P1Q9H4G8 78 aa15.41■□□□□ 0.06
CHMP2A-204ENST00000597848 K7EQD1 137 aa15.4■□□□□ 0.06
CHMP2A-204ENST00000597848 MRPL23Q16540 153 aaKnown RBP15.4■□□□□ 0.06
CHMP2A-204ENST00000597848 CSMD3Q7Z407 3707 aa15.4■□□□□ 0.06
CHMP2A-204ENST00000597848 A0A096LPF7 62 aa15.39■□□□□ 0.05
CHMP2A-204ENST00000597848 C7orf77A4D0Y5 90 aa15.39■□□□□ 0.05
CHMP2A-204ENST00000597848 FAM3BP58499 235 aaPredicted RBP15.39■□□□□ 0.05
CHMP2A-204ENST00000597848 STARD9Q9P2P6 4700 aa15.38■□□□□ 0.05
CHMP2A-204ENST00000597848 TENM2Q9NT68 2774 aa15.38■□□□□ 0.05
CHMP2A-204ENST00000597848 SRIP30626 198 aa15.38■□□□□ 0.05
CHMP2A-204ENST00000597848 LINC00315P59091 139 aa15.38■□□□□ 0.05
CHMP2A-204ENST00000597848 RPS10P5Q9NQ39 176 aa15.38■□□□□ 0.05
CHMP2A-204ENST00000597848 RHEBQ15382 184 aa15.37■□□□□ 0.05
CHMP2A-204ENST00000597848 MRPL54Q6P161 138 aaKnown RBP15.37■□□□□ 0.05
CHMP2A-204ENST00000597848 SVBPQ8N300 66 aa15.37■□□□□ 0.05
CHMP2A-204ENST00000597848 GAGE12JA6NER3 117 aa15.36■□□□□ 0.05
CHMP2A-204ENST00000597848 SNAPINO95295 136 aa15.36■□□□□ 0.05
CHMP2A-204ENST00000597848 P0DMU3 169 aa15.36■□□□□ 0.05
CHMP2A-204ENST00000597848 FAM231AP0DMU4 169 aa15.36■□□□□ 0.05
CHMP2A-204ENST00000597848 FAM231CP0DMU5 169 aa15.36■□□□□ 0.05
CHMP2A-204ENST00000597848 CAMPP49913 170 aa15.36■□□□□ 0.05
CHMP2A-204ENST00000597848 GAGE1Q13065 139 aa15.36■□□□□ 0.05
CHMP2A-204ENST00000597848 GAGE4Q13068 117 aa15.36■□□□□ 0.05
CHMP2A-204ENST00000597848 GAGE5Q13069 117 aa15.36■□□□□ 0.05
CHMP2A-204ENST00000597848 GAGE13Q4V321 117 aa15.36■□□□□ 0.05
CHMP2A-204ENST00000597848 LY6G6CO95867 125 aa15.35■□□□□ 0.05
CHMP2A-204ENST00000597848 NEGR1Q7Z3B1 354 aa15.35■□□□□ 0.05
CHMP2A-204ENST00000597848 UBE2DNLQ8IWF7 75 aa15.35■□□□□ 0.05
CHMP2A-204ENST00000597848 A0A1B0GW15 77 aa15.34■□□□□ 0.05
CHMP2A-204ENST00000597848 CCL18P55774 89 aa15.34■□□□□ 0.05
CHMP2A-204ENST00000597848 LGALS9CQ6DKI2 356 aa15.34■□□□□ 0.05
CHMP2A-204ENST00000597848 SUMO4Q6EEV6 95 aa15.34■□□□□ 0.05
CHMP2A-204ENST00000597848 KCNIP4Q6PIL6 250 aa15.34■□□□□ 0.05
CHMP2A-204ENST00000597848 IMMP2LQ96T52 175 aa15.34■□□□□ 0.05
CHMP2A-204ENST00000597848 TMEM191AQ9H0A3 160 aa15.34■□□□□ 0.05
CHMP2A-204ENST00000597848 Q9UF83 564 aa15.34■□□□□ 0.05
CHMP2A-204ENST00000597848 A0A087WWC5 75 aa15.33■□□□□ 0.04
CHMP2A-204ENST00000597848 TRBV10-1A0A0K0K1A3 114 aa15.33■□□□□ 0.04
CHMP2A-204ENST00000597848 SH2D6Q7Z4S9 175 aa15.33■□□□□ 0.04
CHMP2A-204ENST00000597848 LINC00476Q8WZB0 136 aa15.33■□□□□ 0.04
CHMP2A-204ENST00000597848 H7C1H1 209 aa15.32■□□□□ 0.04
CHMP2A-204ENST00000597848 S100A8P05109 93 aa15.32■□□□□ 0.04
CHMP2A-204ENST00000597848 HBBP68871 147 aa15.32■□□□□ 0.04
CHMP2A-204ENST00000597848 ESRGQ1W209 222 aa15.32■□□□□ 0.04
CHMP2A-204ENST00000597848 ZNRF2Q8NHG8 242 aa15.32■□□□□ 0.04
CHMP2A-204ENST00000597848 TMEM242Q9NWH2 141 aa15.32■□□□□ 0.04
CHMP2A-204ENST00000597848 DYNC2H1Q8NCM8 4307 aaKnown RBP15.32■□□□□ 0.04
CHMP2A-204ENST00000597848 S100PP25815 95 aa15.31■□□□□ 0.04
CHMP2A-204ENST00000597848 RPL36AP83881 106 aaKnown RBP15.31■□□□□ 0.04
CHMP2A-204ENST00000597848 RPL36ALQ969Q0 106 aaKnown RBP15.31■□□□□ 0.04
CHMP2A-204ENST00000597848 BTF3L4Q96K17 158 aa15.31■□□□□ 0.04
CHMP2A-204ENST00000597848 LCE6AA0A183 80 aa15.3■□□□□ 0.04
CHMP2A-204ENST00000597848 M0QY20 66 aa15.3■□□□□ 0.04
CHMP2A-204ENST00000597848 LYPD5Q6UWN5 251 aa15.3■□□□□ 0.04
CHMP2A-204ENST00000597848 ATP5L2Q7Z4Y8 100 aa15.3■□□□□ 0.04
CHMP2A-204ENST00000597848 NEXN-AS1Q8NBZ9 246 aa15.3■□□□□ 0.04
CHMP2A-204ENST00000597848 ATP6V0E2Q8NHE4 81 aa15.3■□□□□ 0.04
CHMP2A-204ENST00000597848 TRAV26-2A0A0B4J265 109 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms