RNA–Protein interactions for RNA: ENST00000597651.5

SOX2-OT-227, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 629 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-227ENST00000597651 SRP19P09132 144 aaKnown RBP9.36□□□□□ -0.91
SOX2-OT-227ENST00000597651 OR5AL1P0C617 328 aa9.36□□□□□ -0.91
SOX2-OT-227ENST00000597651 GZMBP10144 247 aa9.36□□□□□ -0.91
SOX2-OT-227ENST00000597651 ZFP2Q6ZN57 461 aa9.36□□□□□ -0.91
SOX2-OT-227ENST00000597651 Q6ZSN1 163 aa9.36□□□□□ -0.91
SOX2-OT-227ENST00000597651 ZFP82Q8N141 532 aa9.36□□□□□ -0.91
SOX2-OT-227ENST00000597651 C6orf223Q8N319 242 aa9.36□□□□□ -0.91
SOX2-OT-227ENST00000597651 OR2D3Q8NGH3 330 aa9.36□□□□□ -0.91
SOX2-OT-227ENST00000597651 OR10AG1Q8NH19 301 aa9.36□□□□□ -0.91
SOX2-OT-227ENST00000597651 OCC1Q8TAD7 63 aa9.36□□□□□ -0.91
SOX2-OT-227ENST00000597651 BIN3Q9NQY0 253 aa9.36□□□□□ -0.91
SOX2-OT-227ENST00000597651 MRPS16Q9Y3D3 137 aaKnown RBP9.36□□□□□ -0.91
SOX2-OT-227ENST00000597651 MUC21A0A0G2JKD1 596 aa9.35□□□□□ -0.91
SOX2-OT-227ENST00000597651 MUC21A0A140T8X8 626 aa9.35□□□□□ -0.91
SOX2-OT-227ENST00000597651 TRBV6-4A0A1B0GX49 114 aa9.35□□□□□ -0.91
SOX2-OT-227ENST00000597651 P01737 135 aa9.35□□□□□ -0.91
SOX2-OT-227ENST00000597651 SRIP30626 198 aa9.35□□□□□ -0.91
SOX2-OT-227ENST00000597651 SOHLH1Q5JUK2 328 aa9.35□□□□□ -0.91
SOX2-OT-227ENST00000597651 NEGR1Q7Z3B1 354 aa9.35□□□□□ -0.91
SOX2-OT-227ENST00000597651 SFRP2Q96HF1 295 aa9.35□□□□□ -0.91
SOX2-OT-227ENST00000597651 UPK3BQ9BT76 320 aa9.35□□□□□ -0.91
SOX2-OT-227ENST00000597651 A0A087WWL8 130 aa9.34□□□□□ -0.91
SOX2-OT-227ENST00000597651 C9JQL5 133 aa9.34□□□□□ -0.91
SOX2-OT-227ENST00000597651 CRYGDP07320 174 aa9.34□□□□□ -0.91
SOX2-OT-227ENST00000597651 IGLC6P0CF74 106 aa9.34□□□□□ -0.91
SOX2-OT-227ENST00000597651 RPS20P60866 119 aaKnown RBP9.34□□□□□ -0.91
SOX2-OT-227ENST00000597651 SRSF3P84103 164 aaKnown RBP9.34□□□□□ -0.91
SOX2-OT-227ENST00000597651 RHOHQ15669 191 aa9.34□□□□□ -0.91
SOX2-OT-227ENST00000597651 LYPD5Q6UWN5 251 aa9.34□□□□□ -0.91
SOX2-OT-227ENST00000597651 NUDT10Q8NFP7 164 aa9.34□□□□□ -0.91
SOX2-OT-227ENST00000597651 NUDT11Q96G61 164 aa9.34□□□□□ -0.91
SOX2-OT-227ENST00000597651 RNASE7Q9H1E1 156 aaKnown RBP9.34□□□□□ -0.91
SOX2-OT-227ENST00000597651 Q9H8V8 135 aa9.34□□□□□ -0.91
SOX2-OT-227ENST00000597651 RHODO00212 210 aa9.33□□□□□ -0.92
SOX2-OT-227ENST00000597651 FAM74A4Q5TZK3 123 aa9.33□□□□□ -0.92
SOX2-OT-227ENST00000597651 FER1L6-AS1Q8NA97 138 aa9.33□□□□□ -0.92
SOX2-OT-227ENST00000597651 SMIM7Q9BQ49 75 aa9.33□□□□□ -0.92
SOX2-OT-227ENST00000597651 PRADC1Q9BSG0 188 aa9.33□□□□□ -0.92
SOX2-OT-227ENST00000597651 SSTP61278 116 aa9.32□□□□□ -0.92
SOX2-OT-227ENST00000597651 SPANXN1Q5VSR9 72 aa9.32□□□□□ -0.92
SOX2-OT-227ENST00000597651 C14orf178Q8N769 122 aaPredicted RBP9.32□□□□□ -0.92
SOX2-OT-227ENST00000597651 TPPP3Q9BW30 176 aa9.32□□□□□ -0.92
SOX2-OT-227ENST00000597651 RPP21Q9H633 154 aaKnown RBP9.32□□□□□ -0.92
SOX2-OT-227ENST00000597651 Q9UF83 564 aa9.32□□□□□ -0.92
SOX2-OT-227ENST00000597651 LY96Q9Y6Y9 160 aa9.32□□□□□ -0.92
SOX2-OT-227ENST00000597651 FAT1Q14517 4588 aa9.32□□□□□ -0.92
SOX2-OT-227ENST00000597651 XKRY2A2RUG3 117 aa9.31□□□□□ -0.92
SOX2-OT-227ENST00000597651 ZNF727A8MUV8 499 aa9.31□□□□□ -0.92
SOX2-OT-227ENST00000597651 KRTAP10-2P60368 255 aa9.31□□□□□ -0.92
SOX2-OT-227ENST00000597651 LINC01551Q86U37 167 aa9.31□□□□□ -0.92
SOX2-OT-227ENST00000597651 C16orf90A8MZG2 172 aa9.3□□□□□ -0.92
SOX2-OT-227ENST00000597651 LINC00694P0DN24 101 aa9.3□□□□□ -0.92
SOX2-OT-227ENST00000597651 LYZL1Q6UWQ5 148 aa9.3□□□□□ -0.92
SOX2-OT-227ENST00000597651 FAM231DQ6ZW35 169 aa9.3□□□□□ -0.92
SOX2-OT-227ENST00000597651 SH2D6Q7Z4S9 175 aa9.3□□□□□ -0.92
SOX2-OT-227ENST00000597651 GAGE12JA6NER3 117 aa9.29□□□□□ -0.92
SOX2-OT-227ENST00000597651 CTRLP40313 264 aa9.29□□□□□ -0.92
SOX2-OT-227ENST00000597651 GAGE1Q13065 139 aa9.29□□□□□ -0.92
SOX2-OT-227ENST00000597651 GAGE4Q13068 117 aa9.29□□□□□ -0.92
SOX2-OT-227ENST00000597651 GAGE5Q13069 117 aa9.29□□□□□ -0.92
SOX2-OT-227ENST00000597651 PEA15Q15121 130 aa9.29□□□□□ -0.92
SOX2-OT-227ENST00000597651 GAGE13Q4V321 117 aa9.29□□□□□ -0.92
SOX2-OT-227ENST00000597651 Q6ZRN7 208 aaPredicted RBP9.29□□□□□ -0.92
SOX2-OT-227ENST00000597651 MSRB1Q9NZV6 116 aa9.29□□□□□ -0.92
SOX2-OT-227ENST00000597651 KIF25-AS1Q9Y6Z4 181 aa9.29□□□□□ -0.92
SOX2-OT-227ENST00000597651 A0A1W2PPQ1 181 aa9.28□□□□□ -0.92
SOX2-OT-227ENST00000597651 F2Z2F3 143 aa9.28□□□□□ -0.92
SOX2-OT-227ENST00000597651 SIVA1O15304 175 aa9.28□□□□□ -0.92
SOX2-OT-227ENST00000597651 GATCO43716 136 aaKnown RBP9.28□□□□□ -0.92
SOX2-OT-227ENST00000597651 CDK2AP2O75956 126 aa9.28□□□□□ -0.92
SOX2-OT-227ENST00000597651 TIRAPP58753 221 aa9.28□□□□□ -0.92
SOX2-OT-227ENST00000597651 ERVFC1-1P60608 527 aa9.28□□□□□ -0.92
SOX2-OT-227ENST00000597651 CACNG7P62955 275 aa9.28□□□□□ -0.92
SOX2-OT-227ENST00000597651 IFITM2Q01629 132 aa9.28□□□□□ -0.92
SOX2-OT-227ENST00000597651 SPATA12Q7Z6I5 190 aa9.28□□□□□ -0.92
SOX2-OT-227ENST00000597651 WFDC10BQ8IUB3 73 aa9.28□□□□□ -0.92
SOX2-OT-227ENST00000597651 GTSF1Q8WW33 167 aa9.28□□□□□ -0.92
SOX2-OT-227ENST00000597651 AP1S3Q96PC3 154 aa9.28□□□□□ -0.92
SOX2-OT-227ENST00000597651 SMDT1Q9H4I9 107 aa9.28□□□□□ -0.92
SOX2-OT-227ENST00000597651 LINC00315P59091 139 aa9.27□□□□□ -0.93
SOX2-OT-227ENST00000597651 RAB4BP61018 213 aa9.27□□□□□ -0.93
SOX2-OT-227ENST00000597651 ZNF56Q15929 161 aa9.27□□□□□ -0.93
SOX2-OT-227ENST00000597651 FAM74A3Q4VXF1 159 aa9.27□□□□□ -0.93
SOX2-OT-227ENST00000597651 ATP6V0E2Q8NHE4 81 aa9.27□□□□□ -0.93
SOX2-OT-227ENST00000597651 RAB14P61106 215 aa9.26□□□□□ -0.93
SOX2-OT-227ENST00000597651 RPL23P62829 140 aaKnown RBP9.26□□□□□ -0.93
SOX2-OT-227ENST00000597651 TMEM241Q24JQ0 296 aa9.26□□□□□ -0.93
SOX2-OT-227ENST00000597651 CNFNQ9BYD5 112 aa9.26□□□□□ -0.93
SOX2-OT-227ENST00000597651 GTSF1LQ9H1H1 148 aa9.26□□□□□ -0.93
SOX2-OT-227ENST00000597651 TNFRSF18Q9Y5U5 241 aa9.26□□□□□ -0.93
SOX2-OT-227ENST00000597651 TRBV10-1A0A0K0K1A3 114 aa9.25□□□□□ -0.93
SOX2-OT-227ENST00000597651 NTF3P20783 257 aa9.25□□□□□ -0.93
SOX2-OT-227ENST00000597651 FUSP35637 526 aaKnown RBP eCLIP9.25□□□□□ -0.93
SOX2-OT-227ENST00000597651 CT83Q5H943 113 aa9.25□□□□□ -0.93
SOX2-OT-227ENST00000597651 TTC32Q5I0X7 151 aa9.25□□□□□ -0.93
SOX2-OT-227ENST00000597651 CLLU1Q5K131 121 aa9.25□□□□□ -0.93
SOX2-OT-227ENST00000597651 ISOC2Q96AB3 205 aa9.25□□□□□ -0.93
SOX2-OT-227ENST00000597651 OSTCQ9NRP0 149 aa9.25□□□□□ -0.93
SOX2-OT-227ENST00000597651 NAT8Q9UHE5 227 aa9.25□□□□□ -0.93
SOX2-OT-227ENST00000597651 A8MWL6 223 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms