RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 TGFAP01135 160 aa11.74□□□□□ -0.53
IRF3-219ENST00000597636 ZFAND6Q6FIF0 208 aa11.74□□□□□ -0.53
IRF3-219ENST00000597636 C20orf173Q96LM9 149 aa11.74□□□□□ -0.53
IRF3-219ENST00000597636 LINC00477Q96M19 166 aa11.74□□□□□ -0.53
IRF3-219ENST00000597636 PRO1854Q9UHT4 67 aa11.74□□□□□ -0.53
IRF3-219ENST00000597636 GNLYP22749 145 aa11.73□□□□□ -0.53
IRF3-219ENST00000597636 ITLN2Q8WWU7 325 aaPredicted RBP11.73□□□□□ -0.53
IRF3-219ENST00000597636 EEF1AKMT3Q96AZ1 226 aa11.73□□□□□ -0.53
IRF3-219ENST00000597636 IGIPA6NJ69 53 aa11.73□□□□□ -0.53
IRF3-219ENST00000597636 TSPEAR-AS2P59090 65 aa11.73□□□□□ -0.53
IRF3-219ENST00000597636 PMVKQ15126 192 aa11.73□□□□□ -0.53
IRF3-219ENST00000597636 C9orf139Q6ZV77 190 aa11.73□□□□□ -0.53
IRF3-219ENST00000597636 ANXA2RQ3ZCQ2 193 aa11.73□□□□□ -0.53
IRF3-219ENST00000597636 C1orf122Q6ZSJ8 110 aa11.73□□□□□ -0.53
IRF3-219ENST00000597636 TP53TG1Q9Y2A0 90 aa11.73□□□□□ -0.53
IRF3-219ENST00000597636 G3V318 75 aa11.72□□□□□ -0.53
IRF3-219ENST00000597636 MED14OSP0DP75 135 aa11.72□□□□□ -0.53
IRF3-219ENST00000597636 TEX29Q8N6K0 151 aa11.72□□□□□ -0.53
IRF3-219ENST00000597636 TRBV7-1A0A0A6YYK4 115 aa11.72□□□□□ -0.53
IRF3-219ENST00000597636 CITED1Q99966 193 aa11.71□□□□□ -0.53
IRF3-219ENST00000597636 SLC25A20O43772 301 aa11.71□□□□□ -0.54
IRF3-219ENST00000597636 POM121L12Q8N7R1 296 aa11.71□□□□□ -0.54
IRF3-219ENST00000597636 RPL32P62910 135 aaKnown RBP11.7□□□□□ -0.54
IRF3-219ENST00000597636 TMEM170BQ5T4T1 132 aa11.7□□□□□ -0.54
IRF3-219ENST00000597636 OR10J6PQ8NGY7 276 aa11.7□□□□□ -0.54
IRF3-219ENST00000597636 AMELXQ99217 191 aa11.7□□□□□ -0.54
IRF3-219ENST00000597636 M0QXV9 152 aa11.7□□□□□ -0.54
IRF3-219ENST00000597636 GNRH2O43555 120 aa11.7□□□□□ -0.54
IRF3-219ENST00000597636 TMEM141Q96I45 108 aa11.7□□□□□ -0.54
IRF3-219ENST00000597636 IGHV4OR15-8A0A075B7B6 117 aa11.69□□□□□ -0.54
IRF3-219ENST00000597636 A0A087WW49 117 aa11.69□□□□□ -0.54
IRF3-219ENST00000597636 RNASE3P12724 160 aaKnown RBP11.69□□□□□ -0.54
IRF3-219ENST00000597636 GAGE5Q13069 117 aa11.69□□□□□ -0.54
IRF3-219ENST00000597636 GAGE6Q13070 117 aa11.69□□□□□ -0.54
IRF3-219ENST00000597636 AJUBAQ96IF1 538 aa11.69□□□□□ -0.54
IRF3-219ENST00000597636 CHD6Q8TD26 2715 aa11.69□□□□□ -0.54
IRF3-219ENST00000597636 C9JAW5 83 aa11.69□□□□□ -0.54
IRF3-219ENST00000597636 J3QQQ9 107 aa11.69□□□□□ -0.54
IRF3-219ENST00000597636 OVOL1O14753 267 aa11.69□□□□□ -0.54
IRF3-219ENST00000597636 POLR2KP53803 58 aaKnown RBP11.69□□□□□ -0.54
IRF3-219ENST00000597636 LINC00315P59091 139 aa11.69□□□□□ -0.54
IRF3-219ENST00000597636 RPL39P62891 51 aaKnown RBP11.69□□□□□ -0.54
IRF3-219ENST00000597636 ZNRF2Q8NHG8 242 aa11.69□□□□□ -0.54
IRF3-219ENST00000597636 KIF25-AS1Q9Y6Z4 181 aa11.69□□□□□ -0.54
IRF3-219ENST00000597636 CELSR1Q9NYQ6 3014 aa11.68□□□□□ -0.54
IRF3-219ENST00000597636 POLQO75417 2590 aa11.68□□□□□ -0.54
IRF3-219ENST00000597636 SRD5A1P18405 259 aa11.68□□□□□ -0.54
IRF3-219ENST00000597636 RNASE4P34096 147 aaKnown RBP11.68□□□□□ -0.54
IRF3-219ENST00000597636 CRIP2P52943 208 aaPredicted RBP11.68□□□□□ -0.54
IRF3-219ENST00000597636 RAX2Q96IS3 184 aa11.68□□□□□ -0.54
IRF3-219ENST00000597636 TIMM17AQ99595 171 aa11.68□□□□□ -0.54
IRF3-219ENST00000597636 ARL3P36405 182 aa11.68□□□□□ -0.54
IRF3-219ENST00000597636 DEFB1P60022 68 aa11.68□□□□□ -0.54
IRF3-219ENST00000597636 DEFB104AQ8WTQ1 72 aa11.68□□□□□ -0.54
IRF3-219ENST00000597636 A4D1N5 150 aa11.67□□□□□ -0.54
IRF3-219ENST00000597636 IGHV3-33P01772 117 aa11.67□□□□□ -0.54
IRF3-219ENST00000597636 ZNF876PQ49A33 203 aa11.67□□□□□ -0.54
IRF3-219ENST00000597636 SS18L2Q9UHA2 77 aa11.67□□□□□ -0.54
IRF3-219ENST00000597636 VCYO14598 125 aa11.67□□□□□ -0.54
IRF3-219ENST00000597636 TRPT1Q86TN4 253 aaKnown RBP11.67□□□□□ -0.54
IRF3-219ENST00000597636 RHODO00212 210 aa11.66□□□□□ -0.54
IRF3-219ENST00000597636 NXPH4O95158 308 aa11.66□□□□□ -0.54
IRF3-219ENST00000597636 NHLRC4P0CG21 123 aaPredicted RBP11.66□□□□□ -0.54
IRF3-219ENST00000597636 LGALS3P17931 250 aaKnown RBP11.66□□□□□ -0.54
IRF3-219ENST00000597636 FAM19A4Q96LR4 140 aa11.66□□□□□ -0.54
IRF3-219ENST00000597636 EIF4EBP3O60516 100 aaPredicted RBP11.66□□□□□ -0.54
IRF3-219ENST00000597636 ZFP36P26651 326 aaKnown RBP11.66□□□□□ -0.54
IRF3-219ENST00000597636 CELSR2Q9HCU4 2923 aa11.66□□□□□ -0.54
IRF3-219ENST00000597636 TMEM263Q8WUH6 116 aaKnown RBP11.65□□□□□ -0.54
IRF3-219ENST00000597636 BBC3Q96PG8 261 aaPredicted RBP11.65□□□□□ -0.54
IRF3-219ENST00000597636 SOCS3O14543 225 aa11.65□□□□□ -0.54
IRF3-219ENST00000597636 APRG1Q8IVJ8 170 aa11.65□□□□□ -0.54
IRF3-219ENST00000597636 SIRPDQ9H106 197 aa11.65□□□□□ -0.54
IRF3-219ENST00000597636 GAGE2BQ13066 116 aa11.65□□□□□ -0.55
IRF3-219ENST00000597636 GAGE2EQ4V326 116 aa11.65□□□□□ -0.55
IRF3-219ENST00000597636 GAGE2DQ9UEU5 116 aa11.65□□□□□ -0.55
IRF3-219ENST00000597636 P0DMU3 169 aa11.64□□□□□ -0.55
IRF3-219ENST00000597636 FAM231AP0DMU4 169 aa11.64□□□□□ -0.55
IRF3-219ENST00000597636 FAM231CP0DMU5 169 aa11.64□□□□□ -0.55
IRF3-219ENST00000597636 SUMO4Q6EEV6 95 aa11.64□□□□□ -0.55
IRF3-219ENST00000597636 B5MCH6 92 aa11.64□□□□□ -0.55
IRF3-219ENST00000597636 A0A0B4J2C4 111 aa11.63□□□□□ -0.55
IRF3-219ENST00000597636 SNCGO76070 127 aa11.63□□□□□ -0.55
IRF3-219ENST00000597636 JPT2Q9H910 190 aa11.63□□□□□ -0.55
IRF3-219ENST00000597636 SDHAF1A6NFY7 115 aa11.63□□□□□ -0.55
IRF3-219ENST00000597636 F6UB75 175 aa11.63□□□□□ -0.55
IRF3-219ENST00000597636 Q8N1Y9 231 aa11.63□□□□□ -0.55
IRF3-219ENST00000597636 ZFHX3Q15911 3703 aa11.62□□□□□ -0.55
IRF3-219ENST00000597636 TRAV4A0A0B4J268 109 aa11.62□□□□□ -0.55
IRF3-219ENST00000597636 H7C2G1 150 aa11.62□□□□□ -0.55
IRF3-219ENST00000597636 C19orf84I3L1E1 186 aa11.62□□□□□ -0.55
IRF3-219ENST00000597636 UNQ9165/PRO28630Q6UXU0 137 aa11.62□□□□□ -0.55
IRF3-219ENST00000597636 NTN5Q8WTR8 489 aaPredicted RBP11.62□□□□□ -0.55
IRF3-219ENST00000597636 TRBV27A0A0K0K1C4 114 aa11.62□□□□□ -0.55
IRF3-219ENST00000597636 LEPROTO15243 131 aa11.62□□□□□ -0.55
IRF3-219ENST00000597636 UBE2E1P51965 193 aa11.62□□□□□ -0.55
IRF3-219ENST00000597636 NDUFV3P56181 108 aaKnown RBP11.62□□□□□ -0.55
IRF3-219ENST00000597636 MUC4Q99102 2169 aa11.62□□□□□ -0.55
IRF3-219ENST00000597636 TRAV2A0A0B4J234 112 aa11.61□□□□□ -0.55
IRF3-219ENST00000597636 TRBV7-9A0A0J9YWB2 115 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms