RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 B4DEV8 164 aa10.33□□□□□ -0.76
TGFB1-202ENST00000597453 SLAQ13239 276 aa10.33□□□□□ -0.76
TGFB1-202ENST00000597453 LINC01559Q495D7 138 aa10.33□□□□□ -0.76
TGFB1-202ENST00000597453 DNLZQ5SXM8 178 aa10.33□□□□□ -0.76
TGFB1-202ENST00000597453 Q8N1X5 172 aa10.33□□□□□ -0.76
TGFB1-202ENST00000597453 A0A087WWC5 75 aa10.32□□□□□ -0.76
TGFB1-202ENST00000597453 TRGV4A0A0C4DH28 118 aa10.32□□□□□ -0.76
TGFB1-202ENST00000597453 M0R036 132 aa10.32□□□□□ -0.76
TGFB1-202ENST00000597453 SRP19P09132 144 aaKnown RBP10.32□□□□□ -0.76
TGFB1-202ENST00000597453 S100A4P26447 101 aaKnown RBP10.32□□□□□ -0.76
TGFB1-202ENST00000597453 FUSP35637 526 aaKnown RBP eCLIP10.32□□□□□ -0.76
TGFB1-202ENST00000597453 RAB5BP61020 215 aa10.32□□□□□ -0.76
TGFB1-202ENST00000597453 MRPL23Q16540 153 aaKnown RBP10.32□□□□□ -0.76
TGFB1-202ENST00000597453 ZNF876PQ49A33 203 aa10.32□□□□□ -0.76
TGFB1-202ENST00000597453 CENPWQ5EE01 88 aa10.32□□□□□ -0.76
TGFB1-202ENST00000597453 SMIM12Q96EX1 92 aa10.32□□□□□ -0.76
TGFB1-202ENST00000597453 IL36BQ9NZH7 164 aa10.32□□□□□ -0.76
TGFB1-202ENST00000597453 FAT1Q14517 4588 aa10.31□□□□□ -0.76
TGFB1-202ENST00000597453 K7EQD1 137 aa10.31□□□□□ -0.76
TGFB1-202ENST00000597453 NEGR1Q7Z3B1 354 aa10.31□□□□□ -0.76
TGFB1-202ENST00000597453 OR4C5Q8NGB2 326 aa10.31□□□□□ -0.76
TGFB1-202ENST00000597453 SCRT2Q9NQ03 307 aa10.31□□□□□ -0.76
TGFB1-202ENST00000597453 RPS10P5Q9NQ39 176 aa10.31□□□□□ -0.76
TGFB1-202ENST00000597453 C9JCJ5 164 aa10.3□□□□□ -0.76
TGFB1-202ENST00000597453 PIK3CD-AS1Q5SR53 167 aa10.3□□□□□ -0.76
TGFB1-202ENST00000597453 WFDC10BQ8IUB3 73 aa10.3□□□□□ -0.76
TGFB1-202ENST00000597453 PGPEP1LA6NFU8 196 aa10.29□□□□□ -0.76
TGFB1-202ENST00000597453 C1orf196B1AJZ1 125 aa10.29□□□□□ -0.76
TGFB1-202ENST00000597453 H3BVH4 76 aa10.29□□□□□ -0.76
TGFB1-202ENST00000597453 CIDEAO60543 219 aa10.29□□□□□ -0.76
TGFB1-202ENST00000597453 CXCL1P09341 107 aa10.29□□□□□ -0.76
TGFB1-202ENST00000597453 GYPEP15421 78 aa10.29□□□□□ -0.76
TGFB1-202ENST00000597453 SRIP30626 198 aa10.29□□□□□ -0.76
TGFB1-202ENST00000597453 GNG4P50150 75 aa10.29□□□□□ -0.76
TGFB1-202ENST00000597453 PNRC1Q12796 327 aaPredicted RBP10.29□□□□□ -0.76
TGFB1-202ENST00000597453 TMSB15BA0A087X1C1 80 aa10.28□□□□□ -0.76
TGFB1-202ENST00000597453 GRIFINA4D1Z8 144 aa10.28□□□□□ -0.76
TGFB1-202ENST00000597453 RS1O15537 224 aa10.28□□□□□ -0.76
TGFB1-202ENST00000597453 IGLV2-8P01709 118 aa10.28□□□□□ -0.76
TGFB1-202ENST00000597453 ARMS2P0C7Q2 107 aa10.28□□□□□ -0.76
TGFB1-202ENST00000597453 DNAH10OSP0CZ25 163 aa10.28□□□□□ -0.76
TGFB1-202ENST00000597453 CFAP126Q5VTH2 177 aa10.28□□□□□ -0.76
TGFB1-202ENST00000597453 PRR27Q6MZM9 219 aa10.28□□□□□ -0.76
TGFB1-202ENST00000597453 LY96Q9Y6Y9 160 aa10.28□□□□□ -0.76
TGFB1-202ENST00000597453 TRBV20OR9-2A0A075B6H5 130 aa10.27□□□□□ -0.77
TGFB1-202ENST00000597453 TMEM250H0YL14 139 aa10.27□□□□□ -0.77
TGFB1-202ENST00000597453 ERVFC1-1P60608 527 aa10.27□□□□□ -0.77
TGFB1-202ENST00000597453 LINC00518Q8N0U6 118 aa10.27□□□□□ -0.77
TGFB1-202ENST00000597453 YPEL4Q96NS1 127 aa10.27□□□□□ -0.77
TGFB1-202ENST00000597453 LOC100131303A0A0U1RQF7 123 aa10.26□□□□□ -0.77
TGFB1-202ENST00000597453 A8MWV9 139 aa10.26□□□□□ -0.77
TGFB1-202ENST00000597453 MGST1P10620 155 aaKnown RBP10.26□□□□□ -0.77
TGFB1-202ENST00000597453 GATA1P15976 413 aaPredicted RBP10.26□□□□□ -0.77
TGFB1-202ENST00000597453 RAB5AP20339 215 aa10.26□□□□□ -0.77
TGFB1-202ENST00000597453 RPL19P84098 196 aaKnown RBP10.26□□□□□ -0.77
TGFB1-202ENST00000597453 NFE4Q86UQ8 179 aa10.26□□□□□ -0.77
TGFB1-202ENST00000597453 SYT8Q8NBV8 401 aa10.26□□□□□ -0.77
TGFB1-202ENST00000597453 TMEM242Q9NWH2 141 aa10.26□□□□□ -0.77
TGFB1-202ENST00000597453 A0A087WTM6 91 aa10.25□□□□□ -0.77
TGFB1-202ENST00000597453 PARLQ9H300 379 aa10.25□□□□□ -0.77
TGFB1-202ENST00000597453 PGPEP1Q9NXJ5 209 aa10.25□□□□□ -0.77
TGFB1-202ENST00000597453 PHLDA3Q9Y5J5 127 aa10.25□□□□□ -0.77
TGFB1-202ENST00000597453 TRAV9-2A0A087WT02 112 aa10.24□□□□□ -0.77
TGFB1-202ENST00000597453 C19orf71A6NCJ1 209 aa10.24□□□□□ -0.77
TGFB1-202ENST00000597453 EREGO14944 169 aa10.24□□□□□ -0.77
TGFB1-202ENST00000597453 DMRTA1Q5VZB9 504 aa10.24□□□□□ -0.77
TGFB1-202ENST00000597453 ZFP2Q6ZN57 461 aa10.24□□□□□ -0.77
TGFB1-202ENST00000597453 ZFP82Q8N141 532 aa10.24□□□□□ -0.77
TGFB1-202ENST00000597453 MSRB1Q9NZV6 116 aa10.24□□□□□ -0.77
TGFB1-202ENST00000597453 VPS13BQ7Z7G8 4022 aa10.24□□□□□ -0.77
TGFB1-202ENST00000597453 DNAH8Q96JB1 4490 aa10.24□□□□□ -0.77
TGFB1-202ENST00000597453 TRBV6-4A0A1B0GX49 114 aa10.23□□□□□ -0.77
TGFB1-202ENST00000597453 SNAI2O43623 268 aa10.23□□□□□ -0.77
TGFB1-202ENST00000597453 S100A8P05109 93 aa10.23□□□□□ -0.77
TGFB1-202ENST00000597453 EVI2AP22794 236 aa10.23□□□□□ -0.77
TGFB1-202ENST00000597453 CDPF1Q6NVV7 123 aa10.23□□□□□ -0.77
TGFB1-202ENST00000597453 DAZAP1Q96EP5 407 aaKnown RBP10.23□□□□□ -0.77
TGFB1-202ENST00000597453 CTDSP1Q9GZU7 261 aa10.23□□□□□ -0.77
TGFB1-202ENST00000597453 HERC1Q15751 4861 aa10.23□□□□□ -0.77
TGFB1-202ENST00000597453 IGHV3-73A0A0B4J1V6 119 aa10.22□□□□□ -0.77
TGFB1-202ENST00000597453 C5orf52A6NGY3 159 aa10.22□□□□□ -0.77
TGFB1-202ENST00000597453 M0R381 172 aa10.22□□□□□ -0.77
TGFB1-202ENST00000597453 RHODO00212 210 aa10.22□□□□□ -0.77
TGFB1-202ENST00000597453 OR5AL1P0C617 328 aa10.22□□□□□ -0.77
TGFB1-202ENST00000597453 RPS20P60866 119 aaKnown RBP10.22□□□□□ -0.77
TGFB1-202ENST00000597453 RHOHQ15669 191 aa10.22□□□□□ -0.77
TGFB1-202ENST00000597453 UFSP1Q6NVU6 142 aa10.22□□□□□ -0.77
TGFB1-202ENST00000597453 SLC25A29Q8N8R3 303 aa10.22□□□□□ -0.77
TGFB1-202ENST00000597453 SSBP4Q9BWG4 385 aaPredicted RBP10.22□□□□□ -0.77
TGFB1-202ENST00000597453 JPT2Q9H910 190 aa10.22□□□□□ -0.77
TGFB1-202ENST00000597453 K7EP13 123 aa10.21□□□□□ -0.77
TGFB1-202ENST00000597453 P01737 135 aa10.21□□□□□ -0.77
TGFB1-202ENST00000597453 S100A6P06703 90 aa10.21□□□□□ -0.77
TGFB1-202ENST00000597453 CRYGDP07320 174 aa10.21□□□□□ -0.77
TGFB1-202ENST00000597453 XGP55808 180 aa10.21□□□□□ -0.77
TGFB1-202ENST00000597453 KRTAP10-1P60331 282 aa10.21□□□□□ -0.77
TGFB1-202ENST00000597453 OR2D3Q8NGH3 330 aa10.21□□□□□ -0.77
TGFB1-202ENST00000597453 OR10AG1Q8NH19 301 aa10.21□□□□□ -0.77
TGFB1-202ENST00000597453 SFRP2Q96HF1 295 aa10.21□□□□□ -0.77
TGFB1-202ENST00000597453 PRADC1Q9BSG0 188 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms