RNA–Protein interactions for RNA: ENST00000597172.5

TRIM28-208, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-208ENST00000597172 SNURFLB1AK76 121 aa6.7□□□□□ -1.34
TRIM28-208ENST00000597172 M0R2P5 195 aa6.7□□□□□ -1.34
TRIM28-208ENST00000597172 M0R381 172 aa6.7□□□□□ -1.34
TRIM28-208ENST00000597172 S100PP25815 95 aa6.7□□□□□ -1.34
TRIM28-208ENST00000597172 CACNG7P62955 275 aa6.7□□□□□ -1.34
TRIM28-208ENST00000597172 ZNF876PQ49A33 203 aa6.7□□□□□ -1.34
TRIM28-208ENST00000597172 MRPL54Q6P161 138 aaKnown RBP6.7□□□□□ -1.34
TRIM28-208ENST00000597172 KCNIP4Q6PIL6 250 aa6.7□□□□□ -1.34
TRIM28-208ENST00000597172 Q6ZTI0 123 aa6.7□□□□□ -1.34
TRIM28-208ENST00000597172 LINC00336Q6ZUF6 198 aa6.7□□□□□ -1.34
TRIM28-208ENST00000597172 LINC00612Q8N6U2 182 aa6.7□□□□□ -1.34
TRIM28-208ENST00000597172 RASL10AQ92737 203 aa6.7□□□□□ -1.34
TRIM28-208ENST00000597172 BTF3L4Q96K17 158 aa6.7□□□□□ -1.34
TRIM28-208ENST00000597172 JPT2Q9H910 190 aa6.7□□□□□ -1.34
TRIM28-208ENST00000597172 TRAV9-1A0A075B6T8 112 aa6.69□□□□□ -1.34
TRIM28-208ENST00000597172 COLCA2A8K830 154 aa6.69□□□□□ -1.34
TRIM28-208ENST00000597172 RIGQ13278 110 aa6.69□□□□□ -1.34
TRIM28-208ENST00000597172 TWIST1Q15672 202 aa6.69□□□□□ -1.34
TRIM28-208ENST00000597172 LGALS9BQ3B8N2 356 aa6.69□□□□□ -1.34
TRIM28-208ENST00000597172 PIK3CD-AS1Q5SR53 167 aa6.69□□□□□ -1.34
TRIM28-208ENST00000597172 FAM222AQ5U5X8 452 aa6.69□□□□□ -1.34
TRIM28-208ENST00000597172 SPANXN1Q5VSR9 72 aa6.69□□□□□ -1.34
TRIM28-208ENST00000597172 LGALS9CQ6DKI2 356 aa6.69□□□□□ -1.34
TRIM28-208ENST00000597172 ZFP82Q8N141 532 aa6.69□□□□□ -1.34
TRIM28-208ENST00000597172 POM121L12Q8N7R1 296 aa6.69□□□□□ -1.34
TRIM28-208ENST00000597172 MRPL16Q9NX20 251 aaKnown RBP6.69□□□□□ -1.34
TRIM28-208ENST00000597172 DKK2Q9UBU2 259 aa6.69□□□□□ -1.34
TRIM28-208ENST00000597172 CELA1Q9UNI1 258 aa6.69□□□□□ -1.34
TRIM28-208ENST00000597172 TRBV24-1A0A075B6N3 115 aa6.68□□□□□ -1.34
TRIM28-208ENST00000597172 TRGV1A0A0A0MS02 117 aa6.68□□□□□ -1.34
TRIM28-208ENST00000597172 A0A0J9YWU9 116 aa6.68□□□□□ -1.34
TRIM28-208ENST00000597172 GAGE12BA1L429 117 aa6.68□□□□□ -1.34
TRIM28-208ENST00000597172 GAGE7O76087 117 aa6.68□□□□□ -1.34
TRIM28-208ENST00000597172 CRYGDP07320 174 aa6.68□□□□□ -1.34
TRIM28-208ENST00000597172 GAGE12FP0CL80 117 aa6.68□□□□□ -1.34
TRIM28-208ENST00000597172 GAGE12GP0CL81 117 aa6.68□□□□□ -1.34
TRIM28-208ENST00000597172 GAGE12IP0CL82 117 aa6.68□□□□□ -1.34
TRIM28-208ENST00000597172 ATP5L2Q7Z4Y8 100 aa6.68□□□□□ -1.34
TRIM28-208ENST00000597172 MAPKAPK5-AS1Q8N8E1 139 aa6.68□□□□□ -1.34
TRIM28-208ENST00000597172 SAMD10Q9BYL1 202 aa6.68□□□□□ -1.34
TRIM28-208ENST00000597172 C11orf68Q9H3H3 251 aaKnown RBP6.68□□□□□ -1.34
TRIM28-208ENST00000597172 KIF25-AS1Q9Y6Z4 181 aa6.68□□□□□ -1.34
TRIM28-208ENST00000597172 LRP1BQ9NZR2 4599 aa6.67□□□□□ -1.34
TRIM28-208ENST00000597172 NUPR2A6NF83 97 aa6.67□□□□□ -1.34
TRIM28-208ENST00000597172 LYRM9A8MSI8 78 aa6.67□□□□□ -1.34
TRIM28-208ENST00000597172 RS1O15537 224 aa6.67□□□□□ -1.34
TRIM28-208ENST00000597172 EVI2AP22794 236 aa6.67□□□□□ -1.34
TRIM28-208ENST00000597172 CAMPP49913 170 aa6.67□□□□□ -1.34
TRIM28-208ENST00000597172 LINC00315P59091 139 aa6.67□□□□□ -1.34
TRIM28-208ENST00000597172 CFAP126Q5VTH2 177 aa6.67□□□□□ -1.34
TRIM28-208ENST00000597172 UFSP1Q6NVU6 142 aa6.67□□□□□ -1.34
TRIM28-208ENST00000597172 C14orf178Q8N769 122 aaPredicted RBP6.67□□□□□ -1.34
TRIM28-208ENST00000597172 GATD1Q8NB37 220 aa6.67□□□□□ -1.34
TRIM28-208ENST00000597172 SYT8Q8NBV8 401 aa6.67□□□□□ -1.34
TRIM28-208ENST00000597172 BORCS7Q96B45 105 aa6.67□□□□□ -1.34
TRIM28-208ENST00000597172 FAM210BQ96KR6 192 aa6.67□□□□□ -1.34
TRIM28-208ENST00000597172 NDUFAF3Q9BU61 184 aa6.67□□□□□ -1.34
TRIM28-208ENST00000597172 A0A087WWL8 130 aa6.66□□□□□ -1.34
TRIM28-208ENST00000597172 A0A1B0GW15 77 aa6.66□□□□□ -1.34
TRIM28-208ENST00000597172 SPART-AS1P0CW21 52 aa6.66□□□□□ -1.34
TRIM28-208ENST00000597172 DEFB130BP0DP73 79 aa6.66□□□□□ -1.34
TRIM28-208ENST00000597172 DEFB130AP0DP74 79 aa6.66□□□□□ -1.34
TRIM28-208ENST00000597172 HBBP68871 147 aa6.66□□□□□ -1.34
TRIM28-208ENST00000597172 C12orf74Q32Q52 190 aa6.66□□□□□ -1.34
TRIM28-208ENST00000597172 TMEM136Q6ZRR5 245 aa6.66□□□□□ -1.34
TRIM28-208ENST00000597172 TMEM191AQ9H0A3 160 aa6.66□□□□□ -1.34
TRIM28-208ENST00000597172 FLG2Q5D862 2391 aaPredicted RBP6.65□□□□□ -1.34
TRIM28-208ENST00000597172 A8MWV9 139 aa6.65□□□□□ -1.34
TRIM28-208ENST00000597172 TRGC1P0CF51 173 aa6.65□□□□□ -1.34
TRIM28-208ENST00000597172 CEMP1Q6PRD7 247 aaPredicted RBP6.65□□□□□ -1.34
TRIM28-208ENST00000597172 RASL11AQ6T310 242 aa6.65□□□□□ -1.34
TRIM28-208ENST00000597172 RNF185Q96GF1 192 aa6.65□□□□□ -1.34
TRIM28-208ENST00000597172 ZNF479Q96JC4 524 aa6.65□□□□□ -1.34
TRIM28-208ENST00000597172 C18orf15Q96N68 181 aa6.65□□□□□ -1.34
TRIM28-208ENST00000597172 KLK5Q9Y337 293 aaPredicted RBP6.65□□□□□ -1.34
TRIM28-208ENST00000597172 TRGV2A0A075B6R0 118 aa6.64□□□□□ -1.35
TRIM28-208ENST00000597172 IGHV3-73A0A0B4J1V6 119 aa6.64□□□□□ -1.35
TRIM28-208ENST00000597172 TRAV4A0A0B4J268 109 aa6.64□□□□□ -1.35
TRIM28-208ENST00000597172 IGHV3-53P01767 116 aa6.64□□□□□ -1.35
TRIM28-208ENST00000597172 RAB4AP20338 218 aa6.64□□□□□ -1.35
TRIM28-208ENST00000597172 DAD1P61803 113 aa6.64□□□□□ -1.35
TRIM28-208ENST00000597172 FAM104BQ5XKR9 115 aa6.64□□□□□ -1.35
TRIM28-208ENST00000597172 Q6ZSN1 163 aa6.64□□□□□ -1.35
TRIM28-208ENST00000597172 AMN1Q8IY45 258 aa6.64□□□□□ -1.35
TRIM28-208ENST00000597172 OR4C5Q8NGB2 326 aa6.64□□□□□ -1.35
TRIM28-208ENST00000597172 AP1S3Q96PC3 154 aa6.64□□□□□ -1.35
TRIM28-208ENST00000597172 GNB1LQ9BYB4 327 aa6.64□□□□□ -1.35
TRIM28-208ENST00000597172 GAS8-AS1O95177 125 aa6.63□□□□□ -1.35
TRIM28-208ENST00000597172 S100A8P05109 93 aa6.63□□□□□ -1.35
TRIM28-208ENST00000597172 RAB5AP20339 215 aa6.63□□□□□ -1.35
TRIM28-208ENST00000597172 NANOS2P60321 138 aaKnown RBP6.63□□□□□ -1.35
TRIM28-208ENST00000597172 RAB4BP61018 213 aa6.63□□□□□ -1.35
TRIM28-208ENST00000597172 SLAQ13239 276 aa6.63□□□□□ -1.35
TRIM28-208ENST00000597172 FHL2Q14192 279 aa6.63□□□□□ -1.35
TRIM28-208ENST00000597172 MRPL51Q4U2R6 128 aaKnown RBP6.63□□□□□ -1.35
TRIM28-208ENST00000597172 FAM74A4Q5TZK3 123 aa6.63□□□□□ -1.35
TRIM28-208ENST00000597172 ZFP2Q6ZN57 461 aa6.63□□□□□ -1.35
TRIM28-208ENST00000597172 Q8N1X5 172 aa6.63□□□□□ -1.35
TRIM28-208ENST00000597172 DPH3P1Q9H4G8 78 aa6.63□□□□□ -1.35
TRIM28-208ENST00000597172 TEX48A0A1B0GUV7 120 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms